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The map label for this gene is omp16 [H]

Identifier: 170750721

GI number: 170750721

Start: 4588457

End: 4588951

Strand: Direct

Name: omp16 [H]

Synonym: Mrad2831_4332

Alternate gene names: 170750721

Gene position: 4588457-4588951 (Clockwise)

Preceding gene: 170750719

Following gene: 170750722

Centisome position: 75.49

GC content: 72.73

Gene sequence:

>495_bases
ATGCCCCAGCGTTTCCGCGCCGCCGCCCTCGGCCTCGCGCTCGTCGCCGCCCTCGGCCTGGGCGCCTGCAGCAACGACAA
GGACCTCGCCGACGCCTCCGCCTTCGGGGCGGGCGCCGCGACCCCCGGCAGCGCCCAGGACTTCGTCGTCAATATCGGCG
ACCGGGTCTTCTTCGAGTCGGATTCCACCGACCTGACGCCCACCGCGACCGCGACCCTCGACAAGCAGGCCGCGTGGCTG
CAGCGCTACCCGCGCTACACCTTCATCATCGAGGGCCACGCCGACGAGCGCGGCACCCGCGAGTACAACTTCTCCCTCGG
CGCCCGCCGGGCCCAGGCGGTGAACGACTACCTCGCCACCCGCGGCATCGCGGCGAGCCGGATGCGGACCGTGTCGTACG
GCAAGGAGCGGCCGGTGGCGGTGTGCAACGACATCTCCTGCTGGTCGCAGAACCGCCGCGCGGTGATCGTCCTCGACCGC
GGCGCCGGCGCGTAA

Upstream 100 bases:

>100_bases
CGCTTAACCAACCCCGCCTACCAACGGCGCCAGGAATACGCGGACCCGCCTCGAAGACCAGCAGCCGGCCTTCGGCACCG
CTCGAGGAGTTTTTCAGACC

Downstream 100 bases:

>100_bases
GCCGCCGCGCGGCCGCGCTCCGGCGGCGGCTCTCGGGCCGCCGCCTCCGATCGATGCTCTCGATCACACCTTCGGCCGCG
CCGCAGTTTTGCCGCGGTGC

Product: peptidoglycan-associated lipoprotein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MPQRFRAAALGLALVAALGLGACSNDKDLADASAFGAGAATPGSAQDFVVNIGDRVFFESDSTDLTPTATATLDKQAAWL
QRYPRYTFIIEGHADERGTREYNFSLGARRAQAVNDYLATRGIAASRMRTVSYGKERPVAVCNDISCWSQNRRAVIVLDR
GAGA

Sequences:

>Translated_164_residues
MPQRFRAAALGLALVAALGLGACSNDKDLADASAFGAGAATPGSAQDFVVNIGDRVFFESDSTDLTPTATATLDKQAAWL
QRYPRYTFIIEGHADERGTREYNFSLGARRAQAVNDYLATRGIAASRMRTVSYGKERPVAVCNDISCWSQNRRAVIVLDR
GAGA
>Mature_163_residues
PQRFRAAALGLALVAALGLGACSNDKDLADASAFGAGAATPGSAQDFVVNIGDRVFFESDSTDLTPTATATLDKQAAWLQ
RYPRYTFIIEGHADERGTREYNFSLGARRAQAVNDYLATRGIAASRMRTVSYGKERPVAVCNDISCWSQNRRAVIVLDRG
AGA

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=102, Percent_Identity=48.0392156862745, Blast_Score=107, Evalue=4e-25,
Organism=Escherichia coli, GI48994946, Length=123, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17565; Mature: 17434

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQRFRAAALGLALVAALGLGACSNDKDLADASAFGAGAATPGSAQDFVVNIGDRVFFES
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECCCEEEEEC
DSTDLTPTATATLDKQAAWLQRYPRYTFIIEGHADERGTREYNFSLGARRAQAVNDYLAT
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHH
RGIAASRMRTVSYGKERPVAVCNDISCWSQNRRAVIVLDRGAGA
CCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
PQRFRAAALGLALVAALGLGACSNDKDLADASAFGAGAATPGSAQDFVVNIGDRVFFES
CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEECCCEEEEEC
DSTDLTPTATATLDKQAAWLQRYPRYTFIIEGHADERGTREYNFSLGARRAQAVNDYLAT
CCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHH
RGIAASRMRTVSYGKERPVAVCNDISCWSQNRRAVIVLDRGAGA
CCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]