| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is 170750695
Identifier: 170750695
GI number: 170750695
Start: 4555392
End: 4556429
Strand: Reverse
Name: 170750695
Synonym: Mrad2831_4305
Alternate gene names: NA
Gene position: 4556429-4555392 (Counterclockwise)
Preceding gene: 170750696
Following gene: 170750694
Centisome position: 74.97
GC content: 78.03
Gene sequence:
>1038_bases ATGAGCGGCGTCCTGCCCGCGTGGCTCAGCGCGCTCCTGTCGGCCTTCGACTTCGCCGCGCCCTGGGCGCTGCTGGCGCT GCCCCTGCCGCTGCTGGCCGCGCGCCTGATCCCCGCGGAGCCGGAGGGCGGCAGCGGCGCCCTGCGCGTGCCCGCCACCC TGGTGGCCGGGGCGCGCTCGGGCGCCGACCGCGCGGCCCGGGGCCGGCGGCGGGCCCTGCTCACCTGGACGCTCTGGATC GCCCTGGTGGCGGCCCTGTCGGGCCCGCGCCTCGTCATGCCGGCGGCCGCGCTCCCGGCCTCGGGCCGCGAGATCATGAT CGCCATGGACCTGTCGGGCTCGATGGAGCGGCGCGACTTCGCCCTCGACGGCGAGACCGTGAACCGGCTCACCGCGGTCA AGCGCGTCGGCACCGACTTCATCCGGCGCCGGGCCGGGGACCGGATCGGCCTCGTGATCTTCGCCGACCAGGCCTACGTG GCGGCGGCGCCGAGCTTCGACACCGCGGCGGTCGCCCGGGCGCTGGACGAGGCGACGATCGGCATCAGCGGCCGCTCCAC CGGCATCGGCGACGGCCTCGGGCTCGCCCTGCGCCGGCTGGACCCGCGGGACGCGGGGGGCGAGGCCGCGTCCGGGAGCA AGCCCGGCGAGAAGCCCGCGAAGGCCGTGATCCTGCTCTCGGACGGCGCCAACAATGCCGGCCAGACCGCCCCCAAGGAC GTGGCGGAGCTCGCCCGGGAGCTGGGCATCAAGGTCTACACCATCGCGCTGGGCCCCCGCGACATGGCCGACGCCGACGG CGAGCAGGACGTGGTCGACACCGAGACCCTGCGCGACATGGCCCGGGCCAGCGGCGGCGAGGCGTTCCGGGTGCGCACCA CCGAGGACCTCGTGCGGGTCGCCGACGCCATCGACCGGCTGGAGGGCGGCCGCGCCCTGGCGCCGCCCCTGCCGCTCCGC CGGGACCTGTGGCCCTGGCCGGCCGCCCTGGCGCTGCTGGCCGCCGCGGCGCTGCTCGCCAGCCGGAGGGGGGCGTGA
Upstream 100 bases:
>100_bases GCGCCGGCCGGGTGCTCGCCGACGGGCTGTACCGGCGGCAGGATCCCGACCTCGACGCCCTCGACGCCGCGCTCGCCCGC CTGATCGGGCGGCTGCGGGC
Downstream 100 bases:
>100_bases TGGTTCGTTACCGCGCCTGTCCGACCACCCCCTTGATCCCGAGGTGCGAGCGCAGCGAGCCTCGAAGGAGGGCTCCGGAC GTCGCGCGTCTGGCTGGAGG
Product: von Willebrand factor type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSGVLPAWLSALLSAFDFAAPWALLALPLPLLAARLIPAEPEGGSGALRVPATLVAGARSGADRAARGRRRALLTWTLWI ALVAALSGPRLVMPAAALPASGREIMIAMDLSGSMERRDFALDGETVNRLTAVKRVGTDFIRRRAGDRIGLVIFADQAYV AAAPSFDTAAVARALDEATIGISGRSTGIGDGLGLALRRLDPRDAGGEAASGSKPGEKPAKAVILLSDGANNAGQTAPKD VAELARELGIKVYTIALGPRDMADADGEQDVVDTETLRDMARASGGEAFRVRTTEDLVRVADAIDRLEGGRALAPPLPLR RDLWPWPAALALLAAAALLASRRGA
Sequences:
>Translated_345_residues MSGVLPAWLSALLSAFDFAAPWALLALPLPLLAARLIPAEPEGGSGALRVPATLVAGARSGADRAARGRRRALLTWTLWI ALVAALSGPRLVMPAAALPASGREIMIAMDLSGSMERRDFALDGETVNRLTAVKRVGTDFIRRRAGDRIGLVIFADQAYV AAAPSFDTAAVARALDEATIGISGRSTGIGDGLGLALRRLDPRDAGGEAASGSKPGEKPAKAVILLSDGANNAGQTAPKD VAELARELGIKVYTIALGPRDMADADGEQDVVDTETLRDMARASGGEAFRVRTTEDLVRVADAIDRLEGGRALAPPLPLR RDLWPWPAALALLAAAALLASRRGA >Mature_344_residues SGVLPAWLSALLSAFDFAAPWALLALPLPLLAARLIPAEPEGGSGALRVPATLVAGARSGADRAARGRRRALLTWTLWIA LVAALSGPRLVMPAAALPASGREIMIAMDLSGSMERRDFALDGETVNRLTAVKRVGTDFIRRRAGDRIGLVIFADQAYVA AAPSFDTAAVARALDEATIGISGRSTGIGDGLGLALRRLDPRDAGGEAASGSKPGEKPAKAVILLSDGANNAGQTAPKDV AELARELGIKVYTIALGPRDMADADGEQDVVDTETLRDMARASGGEAFRVRTTEDLVRVADAIDRLEGGRALAPPLPLRR DLWPWPAALALLAAAALLASRRGA
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 35897; Mature: 35765
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVLPAWLSALLSAFDFAAPWALLALPLPLLAARLIPAEPEGGSGALRVPATLVAGARS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCCC GADRAARGRRRALLTWTLWIALVAALSGPRLVMPAAALPASGREIMIAMDLSGSMERRDF CCHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEECHHCCCCCCCEEEEEEECCCCCCCCCE ALDGETVNRLTAVKRVGTDFIRRRAGDRIGLVIFADQAYVAAAPSFDTAAVARALDEATI ECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHE GISGRSTGIGDGLGLALRRLDPRDAGGEAASGSKPGEKPAKAVILLSDGANNAGQTAPKD ECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHH VAELARELGIKVYTIALGPRDMADADGEQDVVDTETLRDMARASGGEAFRVRTTEDLVRV HHHHHHHCCCEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHH ADAIDRLEGGRALAPPLPLRRDLWPWPAALALLAAAALLASRRGA HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SGVLPAWLSALLSAFDFAAPWALLALPLPLLAARLIPAEPEGGSGALRVPATLVAGARS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHCCCC GADRAARGRRRALLTWTLWIALVAALSGPRLVMPAAALPASGREIMIAMDLSGSMERRDF CCHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEECHHCCCCCCCEEEEEEECCCCCCCCCE ALDGETVNRLTAVKRVGTDFIRRRAGDRIGLVIFADQAYVAAAPSFDTAAVARALDEATI ECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHE GISGRSTGIGDGLGLALRRLDPRDAGGEAASGSKPGEKPAKAVILLSDGANNAGQTAPKD ECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHH VAELARELGIKVYTIALGPRDMADADGEQDVVDTETLRDMARASGGEAFRVRTTEDLVRV HHHHHHHCCCEEEEEEECCCHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHH ADAIDRLEGGRALAPPLPLRRDLWPWPAALALLAAAALLASRRGA HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]