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The map label for this gene is soxC [H]

Identifier: 170750618

GI number: 170750618

Start: 4478128

End: 4479366

Strand: Direct

Name: soxC [H]

Synonym: Mrad2831_4228

Alternate gene names: 170750618

Gene position: 4478128-4479366 (Clockwise)

Preceding gene: 170750617

Following gene: 170750619

Centisome position: 73.68

GC content: 76.43

Gene sequence:

>1239_bases
ATGCCGCTCCAGCCCCACGAGACCGCCTTCACGCAGGCACCCGCGCCGCCGCGCCCGGTGCCGGTCCTTCCGGACGCCGC
CGCGGCGCTCGCCGTCGCCGACCGGCTGGCGGAGGACTTCGCCGAGGCCGCCGCCGCGCGCGACCTGGAGCGCCGCCTGC
CGGTCGCCGAGATCGCGCGCTTCGCCGAATCCGGCCTCTGGGCGATCACGGTGCCGAGGGAATACGGCGGCCCCGGCCTC
GACAGCGCCACGGTCGCCCAGGTGATCGCCCGGATCGCCGCGGCGGACGGCTCCCTCGGCCAGATCCCGCAGAACCACTT
CTACGCCCTGGAGGTGCTCCGCAACGGCGGCACCGAGGCCCAGAAGCGCGCCCTCTACGGCCGCGTCCTGGCGGGCGAGC
GCTTCGGCAACGCGCTGGCCGAGATCGGCGCGCGCGACCACACCCGCCGCACCCGGCTCGTGCGCGACCCGGCCGGCTGG
TATGTCGAGGGCCGCAAATACTACTGCACCGGCTCGCTCTACGCCCACCGCATCCCCACCCTGGCCAGCGCCGAGGAGGA
GGGGCGGGCGGTCGCCTACCTCGTCTTCGTCCCCCGGGACGCGCCCGGCGTGACCCTGGTCGACGACTGGGACGGGTTCG
GGCAGCGGCTCACCGGCTCGGGCTCGGTCCTGTTCGAGCGCGTCGCCGTGGAGCCCGACTGGGTGGTGCCGTTCCAGGCC
TCGCTGGAGCGGCCGACCGCGATCGGCCCCTTCGCGCAGATCCTGCACGCCGGGATCGATCTCGGCATCGGCGCGGGCGC
CTTCGCGGCGACCCTGCCCCTCGTGCGAGACCGCGCCCGGCCGTGGATCGATTCCGGCGTCGCCCGGGCCAGCGAGGATC
CGCTGACCCTCCACGCGCTGGGCGACGTCCAGGTGCGCCTCGCGGCGGCCGACGCCCTGCTGGCGCGCGCCGGCCGCTAC
GTGGACGCCGCCCAGGCCGCCCCCGACGCCGACAGCGTCGCGGCCGCCTCCGTGGCGGTGGCGGAGGCCCGGGCCGCGAG
CCACCGGGCCGGCCTGCTCGCGGCCAACAAGCTCGTCGAGCTCGGCGGCACCTCCGCCACCGACCGGGCCGAGGCGCTCG
ACCGCTACTGGCGCAACGTCCGCACCCACACCCTGCACGATCCGGTGCGGTGGAAGTACCACTGGATCGGCGCCTACCAC
CTCGACGGCCGGCAGCCGCCCCGGCACGGAGCGCTCTGA

Upstream 100 bases:

>100_bases
ACCCTGCACGACCCGGTGCGGTGGAAGTACCACCTCCTCGGCAACCACGCCCTGAACGGCGTGCTGCCCGCCCGGCACCA
GTGGAACTGAGGACCGGGCG

Downstream 100 bases:

>100_bases
TGGCCGCCGCGACGAAGCAGATCCTGCTGAACGCCTTCAACATGACCTGCGCGGGCCACATCAACCACGGGCTCTGGACC
CACCCGCGCGACCGCTCGGC

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MPLQPHETAFTQAPAPPRPVPVLPDAAAALAVADRLAEDFAEAAAARDLERRLPVAEIARFAESGLWAITVPREYGGPGL
DSATVAQVIARIAAADGSLGQIPQNHFYALEVLRNGGTEAQKRALYGRVLAGERFGNALAEIGARDHTRRTRLVRDPAGW
YVEGRKYYCTGSLYAHRIPTLASAEEEGRAVAYLVFVPRDAPGVTLVDDWDGFGQRLTGSGSVLFERVAVEPDWVVPFQA
SLERPTAIGPFAQILHAGIDLGIGAGAFAATLPLVRDRARPWIDSGVARASEDPLTLHALGDVQVRLAAADALLARAGRY
VDAAQAAPDADSVAAASVAVAEARAASHRAGLLAANKLVELGGTSATDRAEALDRYWRNVRTHTLHDPVRWKYHWIGAYH
LDGRQPPRHGAL

Sequences:

>Translated_412_residues
MPLQPHETAFTQAPAPPRPVPVLPDAAAALAVADRLAEDFAEAAAARDLERRLPVAEIARFAESGLWAITVPREYGGPGL
DSATVAQVIARIAAADGSLGQIPQNHFYALEVLRNGGTEAQKRALYGRVLAGERFGNALAEIGARDHTRRTRLVRDPAGW
YVEGRKYYCTGSLYAHRIPTLASAEEEGRAVAYLVFVPRDAPGVTLVDDWDGFGQRLTGSGSVLFERVAVEPDWVVPFQA
SLERPTAIGPFAQILHAGIDLGIGAGAFAATLPLVRDRARPWIDSGVARASEDPLTLHALGDVQVRLAAADALLARAGRY
VDAAQAAPDADSVAAASVAVAEARAASHRAGLLAANKLVELGGTSATDRAEALDRYWRNVRTHTLHDPVRWKYHWIGAYH
LDGRQPPRHGAL
>Mature_411_residues
PLQPHETAFTQAPAPPRPVPVLPDAAAALAVADRLAEDFAEAAAARDLERRLPVAEIARFAESGLWAITVPREYGGPGLD
SATVAQVIARIAAADGSLGQIPQNHFYALEVLRNGGTEAQKRALYGRVLAGERFGNALAEIGARDHTRRTRLVRDPAGWY
VEGRKYYCTGSLYAHRIPTLASAEEEGRAVAYLVFVPRDAPGVTLVDDWDGFGQRLTGSGSVLFERVAVEPDWVVPFQAS
LERPTAIGPFAQILHAGIDLGIGAGAFAATLPLVRDRARPWIDSGVARASEDPLTLHALGDVQVRLAAADALLARAGRYV
DAAQAAPDADSVAAASVAVAEARAASHRAGLLAANKLVELGGTSATDRAEALDRYWRNVRTHTLHDPVRWKYHWIGAYHL
DGRQPPRHGAL

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4501859, Length=381, Percent_Identity=24.1469816272966, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI4557233, Length=391, Percent_Identity=27.3657289002558, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508101, Length=338, Percent_Identity=24.2603550295858, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24666513, Length=392, Percent_Identity=23.2142857142857, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356377, Length=385, Percent_Identity=27.012987012987, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44109; Mature: 43978

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLQPHETAFTQAPAPPRPVPVLPDAAAALAVADRLAEDFAEAAAARDLERRLPVAEIAR
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FAESGLWAITVPREYGGPGLDSATVAQVIARIAAADGSLGQIPQNHFYALEVLRNGGTEA
HHHCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHH
QKRALYGRVLAGERFGNALAEIGARDHTRRTRLVRDPAGWYVEGRKYYCTGSLYAHRIPT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCEEECEEEEEECCHHHHHCCC
LASAEEEGRAVAYLVFVPRDAPGVTLVDDWDGFGQRLTGSGSVLFERVAVEPDWVVPFQA
HHCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCEECCCCCEEEHEEECCCCEECCHHH
SLERPTAIGPFAQILHAGIDLGIGAGAFAATLPLVRDRARPWIDSGVARASEDPLTLHAL
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEE
GDVQVRLAAADALLARAGRYVDAAQAAPDADSVAAASVAVAEARAASHRAGLLAANKLVE
CCEEEEEHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGTSATDRAEALDRYWRNVRTHTLHDPVRWKYHWIGAYHLDGRQPPRHGAL
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PLQPHETAFTQAPAPPRPVPVLPDAAAALAVADRLAEDFAEAAAARDLERRLPVAEIAR
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FAESGLWAITVPREYGGPGLDSATVAQVIARIAAADGSLGQIPQNHFYALEVLRNGGTEA
HHHCCCEEEECCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHH
QKRALYGRVLAGERFGNALAEIGARDHTRRTRLVRDPAGWYVEGRKYYCTGSLYAHRIPT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEECCCCCEEECEEEEEECCHHHHHCCC
LASAEEEGRAVAYLVFVPRDAPGVTLVDDWDGFGQRLTGSGSVLFERVAVEPDWVVPFQA
HHCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCEECCCCCEEEHEEECCCCEECCHHH
SLERPTAIGPFAQILHAGIDLGIGAGAFAATLPLVRDRARPWIDSGVARASEDPLTLHAL
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEE
GDVQVRLAAADALLARAGRYVDAAQAAPDADSVAAASVAVAEARAASHRAGLLAANKLVE
CCEEEEEHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGTSATDRAEALDRYWRNVRTHTLHDPVRWKYHWIGAYHLDGRQPPRHGAL
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]