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The map label for this gene is soxC [H]

Identifier: 170750617

GI number: 170750617

Start: 4476861

End: 4478117

Strand: Direct

Name: soxC [H]

Synonym: Mrad2831_4227

Alternate gene names: 170750617

Gene position: 4476861-4478117 (Clockwise)

Preceding gene: 170750616

Following gene: 170750618

Centisome position: 73.66

GC content: 77.25

Gene sequence:

>1257_bases
ATGAGCCTGAACGTGGACGAATCCGCCGCCGACGGGGCGGCCGAGCCGCTGACCCCGCCGCTGCCCCCGCCGCCGTCGCC
GCCGCACCGGATCCGCTCGGACGCCGAGGCGCTCGCGGCCGCGCGGGCCGTGGCCCGGGTCTTCGCGGCGGGCGCGGCCG
AGCGCGACCGGGACCGGCGCCTGCCCTGGGCGGAGATCGCGGCCTTCACGGAGAGCGGGCTCGGCGGCATCACGGTGCCG
CGCGCCCATGGCGGCGCCGGGGTCTCGCACGCGACGCTCGCGGAGGTCTTCGCGATCCTCGCCGCCGCCGACGGCTCGGC
GGCGCAGATCCCCCAGAACCAGTTCGGCGTCCTGGCGCTGGTCGCGGCCGCCGCCAGCCCCGCCCAGCAGGCGCGGATCT
ACCGCGACGTGCTCGCCGGCCACCGGATCGGCAATGCCGGCCCCGCCCGCAACGGCAAGGCCATCACCAACGTGGACACG
CGGCTGACCGCCGGGCCGGAGGGCCCGCGGCTCAGCGGCACGCGCTTCTACTCCACGGGCGCGCTCTTCGCCCACTGGAT
CCCGACCCGAGCGGTCGGCCCCGACGGGGGGCCGCTCCTGGTCTTCGTGCGCCGGGACGCCCCCGGCGTGCGGGTGGCGG
ACGACTGGCAGGGCTTCGGCCAGCGCACCACGGCGAGCGGCACCGTGGTCTTCGCGCAGGCCCCGGTCGAGGCGGATCTG
ACGATCGACCTCGCGCCCCTGGCCGGGCGCCCGGGCCTGTTCGGGCCGGTCTCGCAGCTGATCCACGCGGCGATCGACGC
CGGGCTCGCCCGGGGCGCGGCCGCCGCCGCCCTCGACTTCCTGCGCTCCCGGACCCGGCCCTATCCCTTCACCGCCGAGA
CCGTCGCGGAGGATCCCCACATCCTCGGCGAGATCGGGCGGCTCACCGTCGACCTGCACGCCGCCGAGGAGGTCCTGGCG
CGGGCCGGAAGGGCGCTCGACCGGATCGCCGCGGCCCCCGTCACCGCCCAGAGCGCGGCCGAGGCCTCGGTGGCGGTGGC
GCAGGCCAAGATCCTGACCACCGAGGCGGCCCTGGAGGCCTCCGAGCGGCTGCTCGAGCTCGCCGGCGCCTCGGCGACCC
GCGACGGGTACAATCTCGGCCGGTACTGGCGCGACGCCCGGGTCCACACCCTGCACGACCCGGTGCGGTGGAAGTACCAC
CTCCTCGGCAACCACGCCCTGAACGGCGTGCTGCCCGCCCGGCACCAGTGGAACTGA

Upstream 100 bases:

>100_bases
CGGCCCCGCGCCCCGGCCCGCGCCCGGCTCGCGGCGGTCCGACCGTGAGGCCGCATCCCTGAGGCCGAATCCGTGAGGCT
GAACCCGTGAGCCTGCACAC

Downstream 100 bases:

>100_bases
GGACCGGGCGATGCCGCTCCAGCCCCACGAGACCGCCTTCACGCAGGCACCCGCGCCGCCGCGCCCGGTGCCGGTCCTTC
CGGACGCCGCCGCGGCGCTC

Product: acyl-CoA dehydrogenase type 2

Products: gamma-butyrobetaine; Acceptor; gamma-butyrobetainyl-CoA [C]

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSLNVDESAADGAAEPLTPPLPPPPSPPHRIRSDAEALAAARAVARVFAAGAAERDRDRRLPWAEIAAFTESGLGGITVP
RAHGGAGVSHATLAEVFAILAAADGSAAQIPQNQFGVLALVAAAASPAQQARIYRDVLAGHRIGNAGPARNGKAITNVDT
RLTAGPEGPRLSGTRFYSTGALFAHWIPTRAVGPDGGPLLVFVRRDAPGVRVADDWQGFGQRTTASGTVVFAQAPVEADL
TIDLAPLAGRPGLFGPVSQLIHAAIDAGLARGAAAAALDFLRSRTRPYPFTAETVAEDPHILGEIGRLTVDLHAAEEVLA
RAGRALDRIAAAPVTAQSAAEASVAVAQAKILTTEAALEASERLLELAGASATRDGYNLGRYWRDARVHTLHDPVRWKYH
LLGNHALNGVLPARHQWN

Sequences:

>Translated_418_residues
MSLNVDESAADGAAEPLTPPLPPPPSPPHRIRSDAEALAAARAVARVFAAGAAERDRDRRLPWAEIAAFTESGLGGITVP
RAHGGAGVSHATLAEVFAILAAADGSAAQIPQNQFGVLALVAAAASPAQQARIYRDVLAGHRIGNAGPARNGKAITNVDT
RLTAGPEGPRLSGTRFYSTGALFAHWIPTRAVGPDGGPLLVFVRRDAPGVRVADDWQGFGQRTTASGTVVFAQAPVEADL
TIDLAPLAGRPGLFGPVSQLIHAAIDAGLARGAAAAALDFLRSRTRPYPFTAETVAEDPHILGEIGRLTVDLHAAEEVLA
RAGRALDRIAAAPVTAQSAAEASVAVAQAKILTTEAALEASERLLELAGASATRDGYNLGRYWRDARVHTLHDPVRWKYH
LLGNHALNGVLPARHQWN
>Mature_417_residues
SLNVDESAADGAAEPLTPPLPPPPSPPHRIRSDAEALAAARAVARVFAAGAAERDRDRRLPWAEIAAFTESGLGGITVPR
AHGGAGVSHATLAEVFAILAAADGSAAQIPQNQFGVLALVAAAASPAQQARIYRDVLAGHRIGNAGPARNGKAITNVDTR
LTAGPEGPRLSGTRFYSTGALFAHWIPTRAVGPDGGPLLVFVRRDAPGVRVADDWQGFGQRTTASGTVVFAQAPVEADLT
IDLAPLAGRPGLFGPVSQLIHAAIDAGLARGAAAAALDFLRSRTRPYPFTAETVAEDPHILGEIGRLTVDLHAAEEVLAR
AGRALDRIAAAPVTAQSAAEASVAVAQAKILTTEAALEASERLLELAGASATRDGYNLGRYWRDARVHTLHDPVRWKYHL
LGNHALNGVLPARHQWN

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.- [C]

Molecular weight: Translated: 43621; Mature: 43489

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNVDESAADGAAEPLTPPLPPPPSPPHRIRSDAEALAAARAVARVFAAGAAERDRDRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
LPWAEIAAFTESGLGGITVPRAHGGAGVSHATLAEVFAILAAADGSAAQIPQNQFGVLAL
CCHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
VAAAASPAQQARIYRDVLAGHRIGNAGPARNGKAITNVDTRLTAGPEGPRLSGTRFYSTG
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCEEEECC
ALFAHWIPTRAVGPDGGPLLVFVRRDAPGVRVADDWQGFGQRTTASGTVVFAQAPVEADL
CHHHHHCCCCCCCCCCCCEEEEEECCCCCCEECCCHHCCCCCCCCCCEEEEEECCCCCCE
TIDLAPLAGRPGLFGPVSQLIHAAIDAGLARGAAAAALDFLRSRTRPYPFTAETVAEDPH
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCH
ILGEIGRLTVDLHAAEEVLARAGRALDRIAAAPVTAQSAAEASVAVAQAKILTTEAALEA
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SERLLELAGASATRDGYNLGRYWRDARVHTLHDPVRWKYHLLGNHALNGVLPARHQWN
HHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCEEEEEECCHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLNVDESAADGAAEPLTPPLPPPPSPPHRIRSDAEALAAARAVARVFAAGAAERDRDRR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC
LPWAEIAAFTESGLGGITVPRAHGGAGVSHATLAEVFAILAAADGSAAQIPQNQFGVLAL
CCHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHH
VAAAASPAQQARIYRDVLAGHRIGNAGPARNGKAITNVDTRLTAGPEGPRLSGTRFYSTG
HHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCEEEECC
ALFAHWIPTRAVGPDGGPLLVFVRRDAPGVRVADDWQGFGQRTTASGTVVFAQAPVEADL
CHHHHHCCCCCCCCCCCCEEEEEECCCCCCEECCCHHCCCCCCCCCCEEEEEECCCCCCE
TIDLAPLAGRPGLFGPVSQLIHAAIDAGLARGAAAAALDFLRSRTRPYPFTAETVAEDPH
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCH
ILGEIGRLTVDLHAAEEVLARAGRALDRIAAAPVTAQSAAEASVAVAQAKILTTEAALEA
HHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SERLLELAGASATRDGYNLGRYWRDARVHTLHDPVRWKYHLLGNHALNGVLPARHQWN
HHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCCCCEEEEEECCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: crotono-betaine; reduced acceptor; crotonobetainyl-CoA [C]

Specific reaction: reduced acceptor + crotono-betaine = Acceptor + gamma-butyrobetaine reduced acceptor + crotonobetainyl-CoA = Acceptor + gamma-butyrobetainyl-CoA [C]

General reaction: Oxidoreductases; Acting on the CH-CH group of donors; With other acceptors [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]