| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750575
Identifier: 170750575
GI number: 170750575
Start: 4436419
End: 4437165
Strand: Reverse
Name: 170750575
Synonym: Mrad2831_4185
Alternate gene names: NA
Gene position: 4437165-4436419 (Counterclockwise)
Preceding gene: 170750579
Following gene: 170750572
Centisome position: 73.01
GC content: 73.49
Gene sequence:
>747_bases ATGCGTCGCGCGGACAGACTGTTTCAGATCATCCAGATCCTGCGGCGCTCCCCGCGCCCGGTGACGGCCGCCGAGATCGC CCGGGAGCTGGAGGTCTCGGTCCGCACGGTCTACCGCGACGTCGCCGACCTCGTCGGCCAGCGCGTGCCGATCCAGGGTG AGGCCGGGCTCGGCTACGTGCTTGGCGCGGCGTTCGACATGCCGCCGCTGATGCTGACGCCCGACGAGATCGAGGCGGCC GTCCTCGGCGCGCAGTGGGTCGCGGGCCGGGGCGAACCGGTCCTCGCCAAGGCGGCGCGCGATCTCATCGCCAAGATCAC CGCCGTGGTGCCCGAGCGCCTGCGCCCGTTCATCGCCGATCCGTCGATCGGCACGCCGACGGCCTTCGCGCAGGCCGCGG ACGGGATCGACGTCGCCCGCGCGCGGGCCTGGATCCGCGAGGGCCGCAAGATCCGCATCCAGTACCGCGACGTCCGCGGG GATCCGAGCCAGCGCGTGATCTGGCCGGTGATCGTCGGGTTCCTCGATGAGGCCCGGATGGTGGCGGCCTGGTGCGAGCT GCGCGGGGCGTTCCGGCACTTCCGCACCGACCGGATCACGGATGCCGAGTTCCTGGAGGAGCGGCACGGCGTCCGGCCGG CCGTCCTGCGGGCGCGCTGGAAGCGGAGCCTGTCGGACCGACAGGCGGCGGGCCCTTCGCCGCCGGCCGGGGAAGTCCCG GGGACAAGCCCGGCTGCCTTATCCTGA
Upstream 100 bases:
>100_bases TCATGGCGCGGTTCCTGTCGTCACGGCGCGCGGGATGGCCGTGGCGGGAGGACTTGTAGGGACGCCCTGCTGACAGCATT CTGTCAGCAGGAGTCGGACG
Downstream 100 bases:
>100_bases GAGGCACCGGTCGGTCTCGCCGGCGCGCATCCGTCGCTGCGGGCCGACCCTCGGGTCAGCTCTTGAAGCCCGTCGCGCAG TGCTTCGGCTCCAGCGCCTT
Product: helix-turn-helix type 11 domain-containing protein
Products: NA
Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; DeoR-Family Transcriptional Regulator; HTH Domain Family; Transcription Regulator Protein; Regulatory Protein; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Regulator Protein DeoR Family; DeoR-Family Protein Transcriptional Regulator; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; GntR Family Transcriptional Regulator; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; NB-Dependent Receptor; Regulatory Protein Deor; HTH Type; Transcriptional Repressor
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRRADRLFQIIQILRRSPRPVTAAEIARELEVSVRTVYRDVADLVGQRVPIQGEAGLGYVLGAAFDMPPLMLTPDEIEAA VLGAQWVAGRGEPVLAKAARDLIAKITAVVPERLRPFIADPSIGTPTAFAQAADGIDVARARAWIREGRKIRIQYRDVRG DPSQRVIWPVIVGFLDEARMVAAWCELRGAFRHFRTDRITDAEFLEERHGVRPAVLRARWKRSLSDRQAAGPSPPAGEVP GTSPAALS
Sequences:
>Translated_248_residues MRRADRLFQIIQILRRSPRPVTAAEIARELEVSVRTVYRDVADLVGQRVPIQGEAGLGYVLGAAFDMPPLMLTPDEIEAA VLGAQWVAGRGEPVLAKAARDLIAKITAVVPERLRPFIADPSIGTPTAFAQAADGIDVARARAWIREGRKIRIQYRDVRG DPSQRVIWPVIVGFLDEARMVAAWCELRGAFRHFRTDRITDAEFLEERHGVRPAVLRARWKRSLSDRQAAGPSPPAGEVP GTSPAALS >Mature_248_residues MRRADRLFQIIQILRRSPRPVTAAEIARELEVSVRTVYRDVADLVGQRVPIQGEAGLGYVLGAAFDMPPLMLTPDEIEAA VLGAQWVAGRGEPVLAKAARDLIAKITAVVPERLRPFIADPSIGTPTAFAQAADGIDVARARAWIREGRKIRIQYRDVRG DPSQRVIWPVIVGFLDEARMVAAWCELRGAFRHFRTDRITDAEFLEERHGVRPAVLRARWKRSLSDRQAAGPSPPAGEVP GTSPAALS
Specific function: Unknown
COG id: COG2378
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27339; Mature: 27339
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRADRLFQIIQILRRSPRPVTAAEIARELEVSVRTVYRDVADLVGQRVPIQGEAGLGYV CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LGAAFDMPPLMLTPDEIEAAVLGAQWVAGRGEPVLAKAARDLIAKITAVVPERLRPFIAD HHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSIGTPTAFAQAADGIDVARARAWIREGRKIRIQYRDVRGDPSQRVIWPVIVGFLDEARM CCCCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH VAAWCELRGAFRHFRTDRITDAEFLEERHGVRPAVLRARWKRSLSDRQAAGPSPPAGEVP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC GTSPAALS CCCCCCCC >Mature Secondary Structure MRRADRLFQIIQILRRSPRPVTAAEIARELEVSVRTVYRDVADLVGQRVPIQGEAGLGYV CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH LGAAFDMPPLMLTPDEIEAAVLGAQWVAGRGEPVLAKAARDLIAKITAVVPERLRPFIAD HHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PSIGTPTAFAQAADGIDVARARAWIREGRKIRIQYRDVRGDPSQRVIWPVIVGFLDEARM CCCCCCHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH VAAWCELRGAFRHFRTDRITDAEFLEERHGVRPAVLRARWKRSLSDRQAAGPSPPAGEVP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC GTSPAALS CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA