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The map label for this gene is xerC [H]

Identifier: 170750554

GI number: 170750554

Start: 4420100

End: 4421290

Strand: Direct

Name: xerC [H]

Synonym: Mrad2831_4162

Alternate gene names: 170750554

Gene position: 4420100-4421290 (Clockwise)

Preceding gene: 170750553

Following gene: 170750555

Centisome position: 72.72

GC content: 63.64

Gene sequence:

>1191_bases
ATGTCTGTCTACAAGCCAAAAGGGTCGCCGTACTTCCTTTTCGACTTCCAGCGCGGAGGTCATCGGTTTTATGGAACGAC
ACAAGAGACCGAGCGGCGTCGGGCCGAAGCGATAGAACAGGCCGAGATCCGCAAGGCAGAGGCGCAGGTTCGTCGCGATC
GGCGCTCGCGTGGTGCCCCGATGACGATCGATATCGCGGCCATGCGGTACTGGAATGAGCGAGGCATGCACACGGCAACC
GCCCGCGAAACCGAACGCAACCTTGAGCGCCTTGTCGAATGGATCGGCCCAAACACACCGCTCCAAGACATCACCGATGA
CACGCTCGCCCAGCTTGTCGCGCGGCGCCGCGGGCAGGCGAAGGTCAACGCCGCCCGCGTGAAACGGCCAGGCAAGCCGC
TGGGCCCGCTCGGCCTCGTATCCCCGGGGCAGGTGAACCGTTCGGTCACGCAGCTCCTGCGCCGCGTTCTGACGCGAGCG
CGCAAGGCGTGGAAGGTGGCCCTTCCCGACGAGCCGAACTGGACGGAGCACATGTTGACTGAGCCGCGAGAGCGCGTGCG
CGAGCTCCGGCACGAAGAGGAAAGCCGCCTAGAGGCCGTTGAGCGTGACGAGTACCGTGCCCCGCGCCTGTTCGCGCAAA
TCACCGGCCTACGACGCCGCGAGGTCACGTCGCTAACATGGCGGCAGGTCGACTTCGGCGCCGAGGTGATCCGCGTCATC
GGCAAGGGCGGCAAAGGGCACGAGATCCCCATCACGCCGGAACTGCACCTGCTTCTTTGGCCTCTGCGAGGGCAGCACGA
GACGCACGTTTTCACGTACCGTTGTCAGCGCACTCGGCTGTGCCCGACTTCGAAGCGCCGATTCGTGAAGGGCCAAATCT
ACCCGATCACCTACCACGGCTTCTCGACGCACGTCCGGCGCGGACTAGAGAAAGCCGGGGTCGCCGATTTCCGAATCCAC
GACCTGCGCCACACGAGTGCAACCCGCACCCTCCGGGCGACAAAGAACCTCAAGATCGTGCAGAAGCTGCTCAACCACTC
GTCGCTCAGCGTGACTGAAAAGTACGCTCACGCGGATCTCGACGATCTGCGCGATGCGATGATCGAGACGGCTGCCGATT
CCGCCGCCCGTCGCTTGAAGTCCCGAGAAAAGTCCCGAGACGGGCGCCATACACAGTCAAAAAACCATTAA

Upstream 100 bases:

>100_bases
ATATCCGATACGTCTTGAAGGGTTTTGGCGAGAAACGCCCGAGAAGAGAGTTCACGCAGTCCGACATTTTAGGCTTTCTC
AATAAAAGGGCTCGCGAGGA

Downstream 100 bases:

>100_bases
AATCAATGATCTGGCGGCATATAGAGCGGAATGCTTCTAAGCGGCAGGTCGTAGGTTCGAGCCCTACCGGGGTCGCCAGG
TGTTTCAACGGGTTGGCACC

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MSVYKPKGSPYFLFDFQRGGHRFYGTTQETERRRAEAIEQAEIRKAEAQVRRDRRSRGAPMTIDIAAMRYWNERGMHTAT
ARETERNLERLVEWIGPNTPLQDITDDTLAQLVARRRGQAKVNAARVKRPGKPLGPLGLVSPGQVNRSVTQLLRRVLTRA
RKAWKVALPDEPNWTEHMLTEPRERVRELRHEEESRLEAVERDEYRAPRLFAQITGLRRREVTSLTWRQVDFGAEVIRVI
GKGGKGHEIPITPELHLLLWPLRGQHETHVFTYRCQRTRLCPTSKRRFVKGQIYPITYHGFSTHVRRGLEKAGVADFRIH
DLRHTSATRTLRATKNLKIVQKLLNHSSLSVTEKYAHADLDDLRDAMIETAADSAARRLKSREKSRDGRHTQSKNH

Sequences:

>Translated_396_residues
MSVYKPKGSPYFLFDFQRGGHRFYGTTQETERRRAEAIEQAEIRKAEAQVRRDRRSRGAPMTIDIAAMRYWNERGMHTAT
ARETERNLERLVEWIGPNTPLQDITDDTLAQLVARRRGQAKVNAARVKRPGKPLGPLGLVSPGQVNRSVTQLLRRVLTRA
RKAWKVALPDEPNWTEHMLTEPRERVRELRHEEESRLEAVERDEYRAPRLFAQITGLRRREVTSLTWRQVDFGAEVIRVI
GKGGKGHEIPITPELHLLLWPLRGQHETHVFTYRCQRTRLCPTSKRRFVKGQIYPITYHGFSTHVRRGLEKAGVADFRIH
DLRHTSATRTLRATKNLKIVQKLLNHSSLSVTEKYAHADLDDLRDAMIETAADSAARRLKSREKSRDGRHTQSKNH
>Mature_395_residues
SVYKPKGSPYFLFDFQRGGHRFYGTTQETERRRAEAIEQAEIRKAEAQVRRDRRSRGAPMTIDIAAMRYWNERGMHTATA
RETERNLERLVEWIGPNTPLQDITDDTLAQLVARRRGQAKVNAARVKRPGKPLGPLGLVSPGQVNRSVTQLLRRVLTRAR
KAWKVALPDEPNWTEHMLTEPRERVRELRHEEESRLEAVERDEYRAPRLFAQITGLRRREVTSLTWRQVDFGAEVIRVIG
KGGKGHEIPITPELHLLLWPLRGQHETHVFTYRCQRTRLCPTSKRRFVKGQIYPITYHGFSTHVRRGLEKAGVADFRIHD
LRHTSATRTLRATKNLKIVQKLLNHSSLSVTEKYAHADLDDLRDAMIETAADSAARRLKSREKSRDGRHTQSKNH

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786748, Length=376, Percent_Identity=25.531914893617, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45895; Mature: 45764

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYKPKGSPYFLFDFQRGGHRFYGTTQETERRRAEAIEQAEIRKAEAQVRRDRRSRGAP
CCCCCCCCCEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MTIDIAAMRYWNERGMHTATARETERNLERLVEWIGPNTPLQDITDDTLAQLVARRRGQA
EEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCC
KVNAARVKRPGKPLGPLGLVSPGQVNRSVTQLLRRVLTRARKAWKVALPDEPNWTEHMLT
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHC
EPRERVRELRHEEESRLEAVERDEYRAPRLFAQITGLRRREVTSLTWRQVDFGAEVIRVI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKGGKGHEIPITPELHLLLWPLRGQHETHVFTYRCQRTRLCPTSKRRFVKGQIYPITYHG
CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHEECCEEEEEEECC
FSTHVRRGLEKAGVADFRIHDLRHTSATRTLRATKNLKIVQKLLNHSSLSVTEKYAHADL
HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH
DDLRDAMIETAADSAARRLKSREKSRDGRHTQSKNH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SVYKPKGSPYFLFDFQRGGHRFYGTTQETERRRAEAIEQAEIRKAEAQVRRDRRSRGAP
CCCCCCCCEEEEEEEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MTIDIAAMRYWNERGMHTATARETERNLERLVEWIGPNTPLQDITDDTLAQLVARRRGQA
EEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCC
KVNAARVKRPGKPLGPLGLVSPGQVNRSVTQLLRRVLTRARKAWKVALPDEPNWTEHMLT
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHC
EPRERVRELRHEEESRLEAVERDEYRAPRLFAQITGLRRREVTSLTWRQVDFGAEVIRVI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKGGKGHEIPITPELHLLLWPLRGQHETHVFTYRCQRTRLCPTSKRRFVKGQIYPITYHG
CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHEECCEEEEEEECC
FSTHVRRGLEKAGVADFRIHDLRHTSATRTLRATKNLKIVQKLLNHSSLSVTEKYAHADL
HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH
DDLRDAMIETAADSAARRLKSREKSRDGRHTQSKNH
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA