| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750550
Identifier: 170750550
GI number: 170750550
Start: 4416717
End: 4418417
Strand: Direct
Name: 170750550
Synonym: Mrad2831_4158
Alternate gene names: NA
Gene position: 4416717-4418417 (Clockwise)
Preceding gene: 170750549
Following gene: 170750553
Centisome position: 72.67
GC content: 65.84
Gene sequence:
>1701_bases ATGGCGGACACGATCAAAGAGTTCCTTGTTGGACTTGCGTTCAACGTCGACAAATCGTCCGAGCGCAAATTTACCGACGC AATTCGTACCGCCACCTTGCAGGCCGACTTGCTCGCCCGCGGCCTTGAGAGTGCGGCGGTCGCCGTCGCGAAGGCCGTCG CCAAGATCGCGGAGGGTTTCGAGAGCGTCCAGTATGTGGCGCAGCGAGCGAACACGTCGGTCGGCAACCTGCGCTCGATG ACGTACGCCCTGTCGCAGCTCGGCACATCGGCCGGGGCGGCACAGGCCGCTCTCTCGCGGTTCGGCCGCCAGGTTGCCAC GGACCCCGGCGCCGAGTCGCTGCTCAAGGCGATCGGCGTGCGCACCCGCGATGCGAAGGGGAAACTGCGGGACACCGTCG ATCTGTTCGAGGAGTTCGGCAAGGCAACTAAGCGGATGCCGGCCTACGTGGCCCTTGGCTACGCGCAGCAGCTCGGCATC GACGACGACACCATGCGAGCGATGCGGGAGCAGCCCGAATTGCTCTCCAAGATGCGCCGCGAGCACGCCGAACTGGCCCG CTCCCTCGGCGTCGACCTCGACGAGTCCTCCCGCAAGGGGACGGACTTCATGCAGTCGCTTCGGAAGCTGCAAGAGGTCA TCACCCTCGTGGCCGAGAAGCTGCTGGCCGACCTGGCGCCAGCATTCAAAACGTTCGTCGATCAGGCGATTGAGTGGGTC CGGCAGAACCCCGATGCGATCCGGGACGGCCTTGAACGGATCGGCACCGCGGCGATGGAGTTCGCCAAGGCGTGTATCGA GATCGCGAAGGAACTCGGCCCGGTCATCACCAAGATCGGTGAGCTGGCGAGCTCGATCACCGGGCACGGTGGCCTGCAAG GCACGATGGAGCTGTTCGCGGCCTTCATGGTCGGGTCGTGGGCCCTCCGGATTGTCGGGGCCATCGGCAGCGTCGGAACG GCCTGGGGGGCTCTTATGCTGCGCCTGGGAATTCCTCTGGCGATCGGAGCCATTGCGACCGGGCATAGGTACCAGACGCC CGAGCAGGCCGCGAAGGATCCCGATCAGGCGGTGTTGCAGCAGGAGGGCATCGACCGCCGGGCTCGCGTCCGCAACTGGA TCGGCGAGAAGTGGCGCAGCGTGTTTGGTGGCGGCAGCGCCGAGGCGGCCGATGGCAGTAGCGACGGCATCCGTCGGCGC GGTGCACGGGCAGCGGCCGGCGATCAGAGCGGCGGCGTGGCGGCCAACCCCGGGGACTACAAGGATGTGCTGGACCACAT CGCCCGGTCTGAGGGCACGGCGCACCGCGCCGGTGGTGGGTACAACACCTCGTTGGCAAATGGCCTGCTGCTTCCGGGCG GGAAGGAACAGGATCTCACGAAAAAGACCCTCGACGAGATCGACGCCCTACAAACCGGGATGCTGCGGCATCAGGCAAAC CGTTGGAACAGCAGCGCCATCGGTCGATATCAAGTCGTTCGCACGACCCTGCGCGCGCAGCGCGCCGCGCTCGGTTTGAA GGGGACAGACCTGTATGACGAGGCCTTGCAGGACCGTATTGGTGCAAACCTCGCCAAAGCGCGCGGGGCGGACCCTGTTG GCCTGCGCCAGGAGTGGGCCTCGCTCGTCGGGGCTAAGAACACCATCGCCGTCGAGTTGATGCGGAAGATCCGGCTAGGG CGTCTCTGCAAACTCATGTGA
Upstream 100 bases:
>100_bases GCTCTTAGGTCTCCACCGGGCGGCGCCGGCACACTCTACAGACTGACCATGACCGGCCCGCTGGATAGCGCGCCTTTCCT ACAAATGGACTGGTGTAATT
Downstream 100 bases:
>100_bases GCCAGAGCATGGTCATGCCGAGGGTGACCATGGCGAGGTAGTTGGCAGCCCGCTTCTCGTAGCGGGTGGCGATGCGGCGA TACTGCTTGAGGCGGTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Related Tail Protein; Lytic Transglycosylase Catalytic; Mannosyl-Glycoprotein Endo-Beta-N-Acetylglucosamidase; Phage Glucosaminidase
Number of amino acids: Translated: 566; Mature: 565
Protein sequence:
>566_residues MADTIKEFLVGLAFNVDKSSERKFTDAIRTATLQADLLARGLESAAVAVAKAVAKIAEGFESVQYVAQRANTSVGNLRSM TYALSQLGTSAGAAQAALSRFGRQVATDPGAESLLKAIGVRTRDAKGKLRDTVDLFEEFGKATKRMPAYVALGYAQQLGI DDDTMRAMREQPELLSKMRREHAELARSLGVDLDESSRKGTDFMQSLRKLQEVITLVAEKLLADLAPAFKTFVDQAIEWV RQNPDAIRDGLERIGTAAMEFAKACIEIAKELGPVITKIGELASSITGHGGLQGTMELFAAFMVGSWALRIVGAIGSVGT AWGALMLRLGIPLAIGAIATGHRYQTPEQAAKDPDQAVLQQEGIDRRARVRNWIGEKWRSVFGGGSAEAADGSSDGIRRR GARAAAGDQSGGVAANPGDYKDVLDHIARSEGTAHRAGGGYNTSLANGLLLPGGKEQDLTKKTLDEIDALQTGMLRHQAN RWNSSAIGRYQVVRTTLRAQRAALGLKGTDLYDEALQDRIGANLAKARGADPVGLRQEWASLVGAKNTIAVELMRKIRLG RLCKLM
Sequences:
>Translated_566_residues MADTIKEFLVGLAFNVDKSSERKFTDAIRTATLQADLLARGLESAAVAVAKAVAKIAEGFESVQYVAQRANTSVGNLRSM TYALSQLGTSAGAAQAALSRFGRQVATDPGAESLLKAIGVRTRDAKGKLRDTVDLFEEFGKATKRMPAYVALGYAQQLGI DDDTMRAMREQPELLSKMRREHAELARSLGVDLDESSRKGTDFMQSLRKLQEVITLVAEKLLADLAPAFKTFVDQAIEWV RQNPDAIRDGLERIGTAAMEFAKACIEIAKELGPVITKIGELASSITGHGGLQGTMELFAAFMVGSWALRIVGAIGSVGT AWGALMLRLGIPLAIGAIATGHRYQTPEQAAKDPDQAVLQQEGIDRRARVRNWIGEKWRSVFGGGSAEAADGSSDGIRRR GARAAAGDQSGGVAANPGDYKDVLDHIARSEGTAHRAGGGYNTSLANGLLLPGGKEQDLTKKTLDEIDALQTGMLRHQAN RWNSSAIGRYQVVRTTLRAQRAALGLKGTDLYDEALQDRIGANLAKARGADPVGLRQEWASLVGAKNTIAVELMRKIRLG RLCKLM >Mature_565_residues ADTIKEFLVGLAFNVDKSSERKFTDAIRTATLQADLLARGLESAAVAVAKAVAKIAEGFESVQYVAQRANTSVGNLRSMT YALSQLGTSAGAAQAALSRFGRQVATDPGAESLLKAIGVRTRDAKGKLRDTVDLFEEFGKATKRMPAYVALGYAQQLGID DDTMRAMREQPELLSKMRREHAELARSLGVDLDESSRKGTDFMQSLRKLQEVITLVAEKLLADLAPAFKTFVDQAIEWVR QNPDAIRDGLERIGTAAMEFAKACIEIAKELGPVITKIGELASSITGHGGLQGTMELFAAFMVGSWALRIVGAIGSVGTA WGALMLRLGIPLAIGAIATGHRYQTPEQAAKDPDQAVLQQEGIDRRARVRNWIGEKWRSVFGGGSAEAADGSSDGIRRRG ARAAAGDQSGGVAANPGDYKDVLDHIARSEGTAHRAGGGYNTSLANGLLLPGGKEQDLTKKTLDEIDALQTGMLRHQANR WNSSAIGRYQVVRTTLRAQRAALGLKGTDLYDEALQDRIGANLAKARGADPVGLRQEWASLVGAKNTIAVELMRKIRLGR LCKLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60728; Mature: 60597
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTIKEFLVGLAFNVDKSSERKFTDAIRTATLQADLLARGLESAAVAVAKAVAKIAEGF CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESVQYVAQRANTSVGNLRSMTYALSQLGTSAGAAQAALSRFGRQVATDPGAESLLKAIGV HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC RTRDAKGKLRDTVDLFEEFGKATKRMPAYVALGYAQQLGIDDDTMRAMREQPELLSKMRR CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHH EHAELARSLGVDLDESSRKGTDFMQSLRKLQEVITLVAEKLLADLAPAFKTFVDQAIEWV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQNPDAIRDGLERIGTAAMEFAKACIEIAKELGPVITKIGELASSITGHGGLQGTMELFA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AFMVGSWALRIVGAIGSVGTAWGALMLRLGIPLAIGAIATGHRYQTPEQAAKDPDQAVLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHH QEGIDRRARVRNWIGEKWRSVFGGGSAEAADGSSDGIRRRGARAAAGDQSGGVAANPGDY HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCH KDVLDHIARSEGTAHRAGGGYNTSLANGLLLPGGKEQDLTKKTLDEIDALQTGMLRHQAN HHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RWNSSAIGRYQVVRTTLRAQRAALGLKGTDLYDEALQDRIGANLAKARGADPVGLRQEWA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHH SLVGAKNTIAVELMRKIRLGRLCKLM HHHCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADTIKEFLVGLAFNVDKSSERKFTDAIRTATLQADLLARGLESAAVAVAKAVAKIAEGF CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ESVQYVAQRANTSVGNLRSMTYALSQLGTSAGAAQAALSRFGRQVATDPGAESLLKAIGV HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCC RTRDAKGKLRDTVDLFEEFGKATKRMPAYVALGYAQQLGIDDDTMRAMREQPELLSKMRR CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHH EHAELARSLGVDLDESSRKGTDFMQSLRKLQEVITLVAEKLLADLAPAFKTFVDQAIEWV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQNPDAIRDGLERIGTAAMEFAKACIEIAKELGPVITKIGELASSITGHGGLQGTMELFA HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH AFMVGSWALRIVGAIGSVGTAWGALMLRLGIPLAIGAIATGHRYQTPEQAAKDPDQAVLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHCCHHHHHHH QEGIDRRARVRNWIGEKWRSVFGGGSAEAADGSSDGIRRRGARAAAGDQSGGVAANPGDY HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCH KDVLDHIARSEGTAHRAGGGYNTSLANGLLLPGGKEQDLTKKTLDEIDALQTGMLRHQAN HHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RWNSSAIGRYQVVRTTLRAQRAALGLKGTDLYDEALQDRIGANLAKARGADPVGLRQEWA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHH SLVGAKNTIAVELMRKIRLGRLCKLM HHHCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA