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The map label for this gene is (hspc4-1 [H]

Identifier: 170750511

GI number: 170750511

Start: 4371144

End: 4371662

Strand: Reverse

Name: (hspc4-1 [H]

Synonym: Mrad2831_4118

Alternate gene names: 170750511

Gene position: 4371662-4371144 (Counterclockwise)

Preceding gene: 170750512

Following gene: 170750510

Centisome position: 71.93

GC content: 72.06

Gene sequence:

>519_bases
ATGAGCGTGAGAGATCTGATTCCCTGGAACCGCACCAGCACCCCGGCGCCGACCGCCCTCGCGCAGGGGTCGGCCAGCCC
CTTCCTGACGCTGCACCGGGAGATGAACCGCCTGTTCGACGACGTGTTCGGCGGGTTCGGCAGCGTGCCGAGCCTCGCGG
GCCGCGGCTTCGGTTGGCCCCAGGTCGAGCTGGCGGAGGCGGACGGCGCGCTGCGCGTCTCCGCCGAGCTTCCCGGGCTC
GACGAGAAGGACGTCGAACTGCTCATCGCGGACGGAGTCCTGACTCTGAAAGGCGAGAAGCGCGCGGAGACCACCGACAA
GGACCGCGGCTATTCCGAGCGCAGCTACGGCCGCTTCGAGCGGTCGATCGCCCTGCCCGTGCCGGTGGAGGAGGAGAAGG
CCGAGGCGACGTTCCGCAACGGCGTCCTCACCGTGACGCTGCCGCGCGCCGCCGAGGCGCCGGAGCGCCGCCGGCGCATC
GCCATCAACGGCGCGGGCGCGCCGGTCGCCAAGCACTGA

Upstream 100 bases:

>100_bases
GCCCGGCCACCCCCTTATCGACACGGATGACATCCCTCACGGGTCCGCGGACCCGCGGGCCCGTTCCCACGACTGCACCG
CATTCGATGGAGCGAGGACC

Downstream 100 bases:

>100_bases
GCCGGTCCTGGGCCGGTCCTGAGCCGGTCCTGGGCCTGTCCTGGGCCTGTCCTGGCGGCGGCCGCCCCCGCGGCCGCGGA
CACGAACGCATGACGCGACG

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSVRDLIPWNRTSTPAPTALAQGSASPFLTLHREMNRLFDDVFGGFGSVPSLAGRGFGWPQVELAEADGALRVSAELPGL
DEKDVELLIADGVLTLKGEKRAETTDKDRGYSERSYGRFERSIALPVPVEEEKAEATFRNGVLTVTLPRAAEAPERRRRI
AINGAGAPVAKH

Sequences:

>Translated_172_residues
MSVRDLIPWNRTSTPAPTALAQGSASPFLTLHREMNRLFDDVFGGFGSVPSLAGRGFGWPQVELAEADGALRVSAELPGL
DEKDVELLIADGVLTLKGEKRAETTDKDRGYSERSYGRFERSIALPVPVEEEKAEATFRNGVLTVTLPRAAEAPERRRRI
AINGAGAPVAKH
>Mature_171_residues
SVRDLIPWNRTSTPAPTALAQGSASPFLTLHREMNRLFDDVFGGFGSVPSLAGRGFGWPQVELAEADGALRVSAELPGLD
EKDVELLIADGVLTLKGEKRAETTDKDRGYSERSYGRFERSIALPVPVEEEKAEATFRNGVLTVTLPRAAEAPERRRRIA
INGAGAPVAKH

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18654; Mature: 18523

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRDLIPWNRTSTPAPTALAQGSASPFLTLHREMNRLFDDVFGGFGSVPSLAGRGFGWP
CCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
QVELAEADGALRVSAELPGLDEKDVELLIADGVLTLKGEKRAETTDKDRGYSERSYGRFE
CEEEECCCCEEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCHHH
RSIALPVPVEEEKAEATFRNGVLTVTLPRAAEAPERRRRIAINGAGAPVAKH
CEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SVRDLIPWNRTSTPAPTALAQGSASPFLTLHREMNRLFDDVFGGFGSVPSLAGRGFGWP
CCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
QVELAEADGALRVSAELPGLDEKDVELLIADGVLTLKGEKRAETTDKDRGYSERSYGRFE
CEEEECCCCEEEEEECCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCHHH
RSIALPVPVEEEKAEATFRNGVLTVTLPRAAEAPERRRRIAINGAGAPVAKH
CEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA