| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is bmrU [H]
Identifier: 170750504
GI number: 170750504
Start: 4364764
End: 4365717
Strand: Reverse
Name: bmrU [H]
Synonym: Mrad2831_4111
Alternate gene names: 170750504
Gene position: 4365717-4364764 (Counterclockwise)
Preceding gene: 170750508
Following gene: 170750503
Centisome position: 71.83
GC content: 71.7
Gene sequence:
>954_bases ATGAGCACGCAAAGGCGTCGGGCCCTGCTGCTCTGCAACGCCAAGGCGCGCAACGGCGCCCTGGATCTGGACGAGGTGCG GGGAATCCTGCGGGCGGGCGGCATCGAGCCGGAGGAGCCGCCGCCGGAGGCCGATTGCCGCGACGTGATCCGTGACCGGG CCGGCGCGGTCGACCTCGTGATCCTCGGCGGCGGCGACGGCACCATGAACTACGCCGCGCCCGCCCTGGTGGAGAGCGGT CTGCCCTTCGCGATCCTGCCGCTCGGCACGGCCAACGACCTCGCCCGCTCCCTCAACCTGCCGCTCGACCCCCTGGCGGC GGCCCGCTTCATCCCGACCGCGCAGGCGCGGCCGGTGGATCTCGGCTGGGTCAACGGCCACTACTACTTCAACGTGGCGA GCATCGGCTTCTCGGCGGAGCTCGCCGGCGAGCTGACCGCCGAATCCAAGAAGACCTGGGGCGTGCTCGGCTACGCGGTG GCGGCGGTGCGGGTGCTGCGCCGGGTCCGGCCCTTCACGGTGACGATCGAGCACGACGGGGTGGTCGAGAAGGTCACCAC CATCCAGGTCTCGGTGGGCAACGGCCGCCACTACGGCGGTGGCATGACCGTGGAGGAGAGTGCCGCGGTCGACGACGGCA AGCTCGATTTCTACAGCCTGGAGATCAATCACTGGTGGCGTCTCCTCGCGCTGCTGCCCGCCCTGCGGCGGGGAACGCAG GGGCGGGCGGGCGACGTGCGGGCGTTCCACACGCGGGAGATCCGGCTCTCGACCCGCAAGCCGCGGCCGGTGAACACCGA CGGCGAGCTGACCACGCACACGCCCGCCCACTTCAAGGTCTTCCCGAAGATCCTGCAGGTCCTGGCCCCCGAACCGGTGC GCGGTCCCACCCCCTTCGACCTCACCGCCCTGGGCAACCGCCTGTTCCCGACCAGCGAGGCGCCCCGCCTGTGA
Upstream 100 bases:
>100_bases ATACCGCGTTCCAGACCGCCCGCTCCCTGCCGTGCCCCGAGGATCCCTTGTCCCGACCTGAGACCGAGTCGCCCCCCGGC CCGCTTCCCGGGGGCACGCG
Downstream 100 bases:
>100_bases CCGACCTGATCGAGCTCGCCAGCCAGCCCGCCGTCTGGGCCGCGCTCGCCACCCTGGTGGTGATGGAGGTGGTGCTCGGT GTCGACAACCTGATCTTCAT
Product: putative lipid kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSTQRRRALLLCNAKARNGALDLDEVRGILRAGGIEPEEPPPEADCRDVIRDRAGAVDLVILGGGDGTMNYAAPALVESG LPFAILPLGTANDLARSLNLPLDPLAAARFIPTAQARPVDLGWVNGHYYFNVASIGFSAELAGELTAESKKTWGVLGYAV AAVRVLRRVRPFTVTIEHDGVVEKVTTIQVSVGNGRHYGGGMTVEESAAVDDGKLDFYSLEINHWWRLLALLPALRRGTQ GRAGDVRAFHTREIRLSTRKPRPVNTDGELTTHTPAHFKVFPKILQVLAPEPVRGPTPFDLTALGNRLFPTSEAPRL
Sequences:
>Translated_317_residues MSTQRRRALLLCNAKARNGALDLDEVRGILRAGGIEPEEPPPEADCRDVIRDRAGAVDLVILGGGDGTMNYAAPALVESG LPFAILPLGTANDLARSLNLPLDPLAAARFIPTAQARPVDLGWVNGHYYFNVASIGFSAELAGELTAESKKTWGVLGYAV AAVRVLRRVRPFTVTIEHDGVVEKVTTIQVSVGNGRHYGGGMTVEESAAVDDGKLDFYSLEINHWWRLLALLPALRRGTQ GRAGDVRAFHTREIRLSTRKPRPVNTDGELTTHTPAHFKVFPKILQVLAPEPVRGPTPFDLTALGNRLFPTSEAPRL >Mature_316_residues STQRRRALLLCNAKARNGALDLDEVRGILRAGGIEPEEPPPEADCRDVIRDRAGAVDLVILGGGDGTMNYAAPALVESGL PFAILPLGTANDLARSLNLPLDPLAAARFIPTAQARPVDLGWVNGHYYFNVASIGFSAELAGELTAESKKTWGVLGYAVA AVRVLRRVRPFTVTIEHDGVVEKVTTIQVSVGNGRHYGGGMTVEESAAVDDGKLDFYSLEINHWWRLLALLPALRRGTQG RAGDVRAFHTREIRLSTRKPRPVNTDGELTTHTPAHFKVFPKILQVLAPEPVRGPTPFDLTALGNRLFPTSEAPRL
Specific function: May catalyze the ATP-dependent phosphorylation of lipids other than diacylglycerol (DAG). In fact, is not able to exhibit diacylglycerol kinase activity in vitro [H]
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=251, Percent_Identity=27.0916334661355, Blast_Score=84, Evalue=9e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: NA
Molecular weight: Translated: 34360; Mature: 34229
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQRRRALLLCNAKARNGALDLDEVRGILRAGGIEPEEPPPEADCRDVIRDRAGAVDLV CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEE ILGGGDGTMNYAAPALVESGLPFAILPLGTANDLARSLNLPLDPLAAARFIPTAQARPVD EEECCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCEE LGWVNGHYYFNVASIGFSAELAGELTAESKKTWGVLGYAVAAVRVLRRVRPFTVTIEHDG EEEECCEEEEEEEECCCCHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC VVEKVTTIQVSVGNGRHYGGGMTVEESAAVDDGKLDFYSLEINHWWRLLALLPALRRGTQ CEEEEEEEEEECCCCEEECCCCEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCC GRAGDVRAFHTREIRLSTRKPRPVNTDGELTTHTPAHFKVFPKILQVLAPEPVRGPTPFD CCCCCEEEEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCEE LTALGNRLFPTSEAPRL HHHHCCCCCCCCCCCCC >Mature Secondary Structure STQRRRALLLCNAKARNGALDLDEVRGILRAGGIEPEEPPPEADCRDVIRDRAGAVDLV CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEE ILGGGDGTMNYAAPALVESGLPFAILPLGTANDLARSLNLPLDPLAAARFIPTAQARPVD EEECCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCEE LGWVNGHYYFNVASIGFSAELAGELTAESKKTWGVLGYAVAAVRVLRRVRPFTVTIEHDG EEEECCEEEEEEEECCCCHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCC VVEKVTTIQVSVGNGRHYGGGMTVEESAAVDDGKLDFYSLEINHWWRLLALLPALRRGTQ CEEEEEEEEEECCCCEEECCCCEEECCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCC GRAGDVRAFHTREIRLSTRKPRPVNTDGELTTHTPAHFKVFPKILQVLAPEPVRGPTPFD CCCCCEEEEEEEEEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCEE LTALGNRLFPTSEAPRL HHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961792; 8969508; 9384377 [H]