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The map label for this gene is dapD [H]

Identifier: 170750496

GI number: 170750496

Start: 4356097

End: 4356972

Strand: Reverse

Name: dapD [H]

Synonym: Mrad2831_4103

Alternate gene names: 170750496

Gene position: 4356972-4356097 (Counterclockwise)

Preceding gene: 170750497

Following gene: 170750495

Centisome position: 71.69

GC content: 70.32

Gene sequence:

>876_bases
ATGTCCCAGGCCGGCAAGCCCCATTCCGATCTCGCCCATTCCGATCTCGCCCAGACCATCGAAGCCGCCTGGGAAGACCG
CGCCAACGTGTCGACTGCCACCAAGGGCGCGGTGCGCGAGGCGGTCGAGGCGGCCCTGGAGCTGCTCGATTCGGGCAAGG
CCCGCGTCGCCGAGAAGTCCGGCAACCGCGACTGGGTGGTGAACCAGTGGCTGAAGAAGGCGGTGCTGCTCTCCTTCCGC
CTCAACGACATGGCGACGATCGAGGGCGGCCCCGGCGGCGCGCCCTGGTGGGACAAGGTCGCGTCGAAATTCGCCGGCTG
GGGCGAGGCCGAGTTCCGCGCCGCGGGCCTGCGCGCCGTCCCAGGCTGCTTCGTCCGCCGGGGCTCCTACATCGCCCCCG
GCGCCGTGCTGATGCCGAGCTTCGTCAATCTCGGCGCGCATGTCGGCGAGGGCACGATGGTCGACACCTGGGTGACGATC
GGCTCCTGCGCGCAGGTGGGGAAGAACTGCCACATCTCGGGCGGTGCCGGCATCGCGGGCGTTCTGGAGCCGCTGCAGGC
GAACCCGGTGATCATCGAGGACGACTGCTTCATCGGCGCCCGCGCCGAGGTGGCGGAGGGCGTCATCGTCGGCCAGGGTA
GCGTCCTGTCCATGGGCGTCTATATCGGCGCCTCCACCAAGATCGTCGACCGGACCACCGGCGAGGTCATGTACGGCCGG
GTGCCGCCCTACTCGGTGGTCGTCTCGGGCACGATGCCCGGCAAGGCGCTGCCGGACGGCACGCCGGGCCCGGGCCTCTA
CTGCGCGGTGATCGTCAAGCGCGTCGATGCCGGCACGCGGTCCAAGACCGCCATCAACGAGCTGCTGCGCACCTGA

Upstream 100 bases:

>100_bases
GCGCGAACTGCTCGAGATCATCGACGGCATCTCCTCAGGTGACAGCTCCGGTGGCCGCTTGTAAGCACGGGCTCCCGCCG
CAAGAGTTCTGATCCGTTCC

Downstream 100 bases:

>100_bases
ACATCCGGAAGCTGGCGGGAGCGCGATGGAGACGTCGGAGCTGACCCTCACGGTGGCGGGCCGGACGGTGCCGACCCCCT
GCGACAGGATCGGGGCGGGG

Product: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase

Products: NA

Alternate protein names: Tetrahydrodipicolinate N-succinyltransferase; THP succinyltransferase; Tetrahydropicolinate succinylase [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSQAGKPHSDLAHSDLAQTIEAAWEDRANVSTATKGAVREAVEAALELLDSGKARVAEKSGNRDWVVNQWLKKAVLLSFR
LNDMATIEGGPGGAPWWDKVASKFAGWGEAEFRAAGLRAVPGCFVRRGSYIAPGAVLMPSFVNLGAHVGEGTMVDTWVTI
GSCAQVGKNCHISGGAGIAGVLEPLQANPVIIEDDCFIGARAEVAEGVIVGQGSVLSMGVYIGASTKIVDRTTGEVMYGR
VPPYSVVVSGTMPGKALPDGTPGPGLYCAVIVKRVDAGTRSKTAINELLRT

Sequences:

>Translated_291_residues
MSQAGKPHSDLAHSDLAQTIEAAWEDRANVSTATKGAVREAVEAALELLDSGKARVAEKSGNRDWVVNQWLKKAVLLSFR
LNDMATIEGGPGGAPWWDKVASKFAGWGEAEFRAAGLRAVPGCFVRRGSYIAPGAVLMPSFVNLGAHVGEGTMVDTWVTI
GSCAQVGKNCHISGGAGIAGVLEPLQANPVIIEDDCFIGARAEVAEGVIVGQGSVLSMGVYIGASTKIVDRTTGEVMYGR
VPPYSVVVSGTMPGKALPDGTPGPGLYCAVIVKRVDAGTRSKTAINELLRT
>Mature_290_residues
SQAGKPHSDLAHSDLAQTIEAAWEDRANVSTATKGAVREAVEAALELLDSGKARVAEKSGNRDWVVNQWLKKAVLLSFRL
NDMATIEGGPGGAPWWDKVASKFAGWGEAEFRAAGLRAVPGCFVRRGSYIAPGAVLMPSFVNLGAHVGEGTMVDTWVTIG
SCAQVGKNCHISGGAGIAGVLEPLQANPVIIEDDCFIGARAEVAEGVIVGQGSVLSMGVYIGASTKIVDRTTGEVMYGRV
PPYSVVVSGTMPGKALPDGTPGPGLYCAVIVKRVDAGTRSKTAINELLRT

Specific function: Biosynthesis of diaminopimelate and lysine from aspartate semialdehyde; fourth step. [C]

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1786362, Length=279, Percent_Identity=62.3655913978495, Blast_Score=313, Evalue=8e-87,

Paralogues:

None

Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005664
- InterPro:   IPR023180
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: =2.3.1.117 [H]

Molecular weight: Translated: 30347; Mature: 30216

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAGKPHSDLAHSDLAQTIEAAWEDRANVSTATKGAVREAVEAALELLDSGKARVAEKS
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCC
GNRDWVVNQWLKKAVLLSFRLNDMATIEGGPGGAPWWDKVASKFAGWGEAEFRAAGLRAV
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHC
PGCFVRRGSYIAPGAVLMPSFVNLGAHVGEGTMVDTWVTIGSCAQVGKNCHISGGAGIAG
CHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCCHHH
VLEPLQANPVIIEDDCFIGARAEVAEGVIVGQGSVLSMGVYIGASTKIVDRTTGEVMYGR
HHHHHCCCCEEEECCCCCCCHHHHHCCEEECCCCEEEEEEEECCCCEEEECCCCCEEECC
VPPYSVVVSGTMPGKALPDGTPGPGLYCAVIVKRVDAGTRSKTAINELLRT
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SQAGKPHSDLAHSDLAQTIEAAWEDRANVSTATKGAVREAVEAALELLDSGKARVAEKS
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCC
GNRDWVVNQWLKKAVLLSFRLNDMATIEGGPGGAPWWDKVASKFAGWGEAEFRAAGLRAV
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHC
PGCFVRRGSYIAPGAVLMPSFVNLGAHVGEGTMVDTWVTIGSCAQVGKNCHISGGAGIAG
CHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCCEEECCCCCHHH
VLEPLQANPVIIEDDCFIGARAEVAEGVIVGQGSVLSMGVYIGASTKIVDRTTGEVMYGR
HHHHHCCCCEEEECCCCCCCHHHHHCCEEECCCCEEEEEEEECCCCEEEECCCCCEEECC
VPPYSVVVSGTMPGKALPDGTPGPGLYCAVIVKRVDAGTRSKTAINELLRT
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA