| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fct [H]
Identifier: 170750492
GI number: 170750492
Start: 4350761
End: 4352992
Strand: Reverse
Name: fct [H]
Synonym: Mrad2831_4099
Alternate gene names: 170750492
Gene position: 4352992-4350761 (Counterclockwise)
Preceding gene: 170750493
Following gene: 170750491
Centisome position: 71.62
GC content: 65.99
Gene sequence:
>2232_bases ATGTCGCTTCGTTCCGCTCAGTCCGGCCTCCTCCTCGCCACCACCGCTCTGACCACCGTCGCCTTCGTTCAGGCCGCCGC CGCGCAGGACGCCGCCGTCCAGCTCAACGAGATCTCCGTGGAGGCCACCCGGCCGGCCATCGCGGCCCCCGCGGGATCCG GCATCGGCGGCGGCAACGTCAGCGGCGGCGACGGCGGCAGCGCGGCCACCAGCGGCGGCGGCGGCGGACCCTCCGGCGTC ACCGGCTACGTGGCGCGCGTGAGCCCCACGGCGACGAAGACCAACACGCCCCTGATCGAGACCCCGCAATCGGTCTCGGT GGTCACCCGCGAGCAGCTCAACGACCGCAACGTGCAGGATCTGGCCCAGGCGATTGCCTACACGCCGGGCGTGTCGAGCA GCGTGTTCGGCTTCGACCCGCGCTACGATGCCTTCTACATCCGCGGCTTCAGCGCGACCTACAACGGCATCTTCCGCGAC GGCCTGCGCCTCAACGCCGTCGGCCTGACGATCCCGCGCAGCGAGCCCTACGGGCTGGAGGCGGTCACCATCCTGAGAGG GCCGGCCTCGGGACTCTACGGTCTCGGCTCGCCCGGCGGCATCGTCGACTCGACCTCGAAGCGCCCGGTCTTCGTGCCCT TCGGCGAGGTGCAGTTTCAGGCCGGCAACTACGACCGCTTCCAGGGCAATTTCGACATCGGCGGCCCGGTGGCGGGCACC GACGGGACGTTGGCCTACCGCGTGACCGGGGTGAAGCGCCAGTCCAACACCTACCTGCCCGGCGGAGACGACGACCGCAC CTTCATCGCCCCGTCCTTCACGTGGCGACCGGATTCCGACACCAGCTTCACGTTCCTCAGCGAGTATTTCGAGTCGCGCC TGCCGGGAACGTCGTTCTTCTACAACGATCCGGGCTTCCGGGTGACCAATTTCTACTCCGGTGACCCGGCGTTCAATCAG TACAAGCAGCAGCAATATCGCATCGGCTACGCTTTCGAGCACAAATTCTCGCCGGATCTGATCTTTCGTCAGAACTTTCG CTACTATGATGTCCGCGCGGATTACGATTACACGTCGATCACGGGACTCAATCCTGCCCGAACCCTGGGCTCGCGGACGG CCGGCGCCTATCTGGACACGCTGAGCCAGATCTCCCTCGACAACCAACTCGAAGGCCACTTCACCACCGGTCCGATCCAG CACACCCTGATCGGCGGGGTCGATTACGCCCATTACGACTACACGCGCGCCTTCGGCTTCGGTGCCGCGCCGGATCTCAA CCTCCTGACCTTGAACTACGGGCAGCAGGTCATCGCCCGGCCGCGTTACACGAACTTCCAGAGCCAGGCGCAGGATCAGA TCGGTGCCTACTTGCAGGAACAGGCCAAGCTCGGGCGCTTCGTCCTGACCCTCACCGGCCGGCACGACTGGGTCTTCCAG AACACGAGCGACCAGACGGCCGGCACGGTCGCCAACCAGACCGATCGGGCCTTCTCGGGCCGTATCGGGCTGAATTACCT GCTCACCGATTTCCTGGTGCCCTACGCCAGCTACGCCACGACCTTCACGCCGCAGGTCGGCATCGACGTGAACGGGAACC CGTTCAAGGCCGCGACCGGCGACCAGATCGAGGCCGGCGTGAAGGTGGCCATCCCGAACACCAACATCACGACGTCGTTC TCAGGATTCGACATCGTGCAATCGTCGCTCCTGCGGCAGGATCCCAATAACATCGCCAATCAGGTCGCGACCGGGTCGGT GGAGTCCAAGGGATTCGAGGCCGAACTGACGGCCAATTTCGCGCCGGGAACCAACCTGACGCTGTCCTACACCCATCTCG ATCTTCGCTACCTGCGCCAGACCTCCCTGGTCACGGGTCGGCCGATCGACGGCAACGCCCTCTCGGGCATCCCGGGCGAC AGCTTCACCGCCTTCGGAACCTATCTGTTCGCGCCCTCCTCGCCGCTGGCCGGCCTGCAACTGGGCGGCGGTATCCGCTA CGCCGGGACGAGTTTCGCCGACGACGAGAACACCGTCCGCAACCCGACCGTGACCCTGTTCGACGCGCTGGTCGCCTACG ATTTCGCGGCCCTCGACCCGAAATACAGGGGCTTCCGCGCGCAGATCAACGCCTCCAACATCTTCGACCGCAGCTACACG ACCTGCCAGGCCGGCTTCTGCTATCGCGGCGCGCCCGCGACGGTCATCGGCAGCCTGATCTACCGCTGGTAG
Upstream 100 bases:
>100_bases AAGTGTGTGATTTGCAACACGTTTTCGGCTTGATCAAGAGACCGTGAGTAATGGTACCTGAGCTCCAGGCGCCGTCTGTA GGCGTATTTCTGGGTCTCCG
Downstream 100 bases:
>100_bases TTTGCGGGGGCGGGGGCCGCGGCATGGCAGGTCCCCGTCCGCGGCACTGGAGCCGGGATCGGAAACCGTCCTAAGGCCGG AGCATCGTCCTCCGACCCGG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MSLRSAQSGLLLATTALTTVAFVQAAAAQDAAVQLNEISVEATRPAIAAPAGSGIGGGNVSGGDGGSAATSGGGGGPSGV TGYVARVSPTATKTNTPLIETPQSVSVVTREQLNDRNVQDLAQAIAYTPGVSSSVFGFDPRYDAFYIRGFSATYNGIFRD GLRLNAVGLTIPRSEPYGLEAVTILRGPASGLYGLGSPGGIVDSTSKRPVFVPFGEVQFQAGNYDRFQGNFDIGGPVAGT DGTLAYRVTGVKRQSNTYLPGGDDDRTFIAPSFTWRPDSDTSFTFLSEYFESRLPGTSFFYNDPGFRVTNFYSGDPAFNQ YKQQQYRIGYAFEHKFSPDLIFRQNFRYYDVRADYDYTSITGLNPARTLGSRTAGAYLDTLSQISLDNQLEGHFTTGPIQ HTLIGGVDYAHYDYTRAFGFGAAPDLNLLTLNYGQQVIARPRYTNFQSQAQDQIGAYLQEQAKLGRFVLTLTGRHDWVFQ NTSDQTAGTVANQTDRAFSGRIGLNYLLTDFLVPYASYATTFTPQVGIDVNGNPFKAATGDQIEAGVKVAIPNTNITTSF SGFDIVQSSLLRQDPNNIANQVATGSVESKGFEAELTANFAPGTNLTLSYTHLDLRYLRQTSLVTGRPIDGNALSGIPGD SFTAFGTYLFAPSSPLAGLQLGGGIRYAGTSFADDENTVRNPTVTLFDALVAYDFAALDPKYRGFRAQINASNIFDRSYT TCQAGFCYRGAPATVIGSLIYRW
Sequences:
>Translated_743_residues MSLRSAQSGLLLATTALTTVAFVQAAAAQDAAVQLNEISVEATRPAIAAPAGSGIGGGNVSGGDGGSAATSGGGGGPSGV TGYVARVSPTATKTNTPLIETPQSVSVVTREQLNDRNVQDLAQAIAYTPGVSSSVFGFDPRYDAFYIRGFSATYNGIFRD GLRLNAVGLTIPRSEPYGLEAVTILRGPASGLYGLGSPGGIVDSTSKRPVFVPFGEVQFQAGNYDRFQGNFDIGGPVAGT DGTLAYRVTGVKRQSNTYLPGGDDDRTFIAPSFTWRPDSDTSFTFLSEYFESRLPGTSFFYNDPGFRVTNFYSGDPAFNQ YKQQQYRIGYAFEHKFSPDLIFRQNFRYYDVRADYDYTSITGLNPARTLGSRTAGAYLDTLSQISLDNQLEGHFTTGPIQ HTLIGGVDYAHYDYTRAFGFGAAPDLNLLTLNYGQQVIARPRYTNFQSQAQDQIGAYLQEQAKLGRFVLTLTGRHDWVFQ NTSDQTAGTVANQTDRAFSGRIGLNYLLTDFLVPYASYATTFTPQVGIDVNGNPFKAATGDQIEAGVKVAIPNTNITTSF SGFDIVQSSLLRQDPNNIANQVATGSVESKGFEAELTANFAPGTNLTLSYTHLDLRYLRQTSLVTGRPIDGNALSGIPGD SFTAFGTYLFAPSSPLAGLQLGGGIRYAGTSFADDENTVRNPTVTLFDALVAYDFAALDPKYRGFRAQINASNIFDRSYT TCQAGFCYRGAPATVIGSLIYRW >Mature_742_residues SLRSAQSGLLLATTALTTVAFVQAAAAQDAAVQLNEISVEATRPAIAAPAGSGIGGGNVSGGDGGSAATSGGGGGPSGVT GYVARVSPTATKTNTPLIETPQSVSVVTREQLNDRNVQDLAQAIAYTPGVSSSVFGFDPRYDAFYIRGFSATYNGIFRDG LRLNAVGLTIPRSEPYGLEAVTILRGPASGLYGLGSPGGIVDSTSKRPVFVPFGEVQFQAGNYDRFQGNFDIGGPVAGTD GTLAYRVTGVKRQSNTYLPGGDDDRTFIAPSFTWRPDSDTSFTFLSEYFESRLPGTSFFYNDPGFRVTNFYSGDPAFNQY KQQQYRIGYAFEHKFSPDLIFRQNFRYYDVRADYDYTSITGLNPARTLGSRTAGAYLDTLSQISLDNQLEGHFTTGPIQH TLIGGVDYAHYDYTRAFGFGAAPDLNLLTLNYGQQVIARPRYTNFQSQAQDQIGAYLQEQAKLGRFVLTLTGRHDWVFQN TSDQTAGTVANQTDRAFSGRIGLNYLLTDFLVPYASYATTFTPQVGIDVNGNPFKAATGDQIEAGVKVAIPNTNITTSFS GFDIVQSSLLRQDPNNIANQVATGSVESKGFEAELTANFAPGTNLTLSYTHLDLRYLRQTSLVTGRPIDGNALSGIPGDS FTAFGTYLFAPSSPLAGLQLGGGIRYAGTSFADDENTVRNPTVTLFDALVAYDFAALDPKYRGFRAQINASNIFDRSYTT CQAGFCYRGAPATVIGSLIYRW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=707, Percent_Identity=33.3804809052334, Blast_Score=340, Evalue=2e-94, Organism=Escherichia coli, GI1787024, Length=730, Percent_Identity=22.6027397260274, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788478, Length=182, Percent_Identity=29.1208791208791, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787344, Length=245, Percent_Identity=28.5714285714286, Blast_Score=63, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 79848; Mature: 79717
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRSAQSGLLLATTALTTVAFVQAAAAQDAAVQLNEISVEATRPAIAAPAGSGIGGGNV CCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEECCCCCCCCCCCC SGGDGGSAATSGGGGGPSGVTGYVARVSPTATKTNTPLIETPQSVSVVTREQLNDRNVQD CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCHHHHHHHHCCCCCHHH LAQAIAYTPGVSSSVFGFDPRYDAFYIRGFSATYNGIFRDGLRLNAVGLTIPRSEPYGLE HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHCCHHHCCEEEEEEEEEECCCCCCCCE AVTILRGPASGLYGLGSPGGIVDSTSKRPVFVPFGEVQFQAGNYDRFQGNFDIGGPVAGT EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCEECCCCCCCCCCCCC DGTLAYRVTGVKRQSNTYLPGGDDDRTFIAPSFTWRPDSDTSFTFLSEYFESRLPGTSFF CCEEEEEEEEEEECCCCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHCCCCEEE YNDPGFRVTNFYSGDPAFNQYKQQQYRIGYAFEHKFSPDLIFRQNFRYYDVRADYDYTSI ECCCCCEEEEEECCCCHHHHHHHHHEEEEEEEECCCCCCEEEECCCEEEEEEECCCCCEE TGLNPARTLGSRTAGAYLDTLSQISLDNQLEGHFTTGPIQHTLIGGVDYAHYDYTRAFGF CCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCEEEHHCCHHHHCCC GAAPDLNLLTLNYGQQVIARPRYTNFQSQAQDQIGAYLQEQAKLGRFVLTLTGRHDWVFQ CCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEE NTSDQTAGTVANQTDRAFSGRIGLNYLLTDFLVPYASYATTFTPQVGIDVNGNPFKAATG CCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCC DQIEAGVKVAIPNTNITTSFSGFDIVQSSLLRQDPNNIANQVATGSVESKGFEAELTANF CCCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEE APGTNLTLSYTHLDLRYLRQTSLVTGRPIDGNALSGIPGDSFTAFGTYLFAPSSPLAGLQ CCCCCEEEEEEEHHHHHHHHHHCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEE LGGGIRYAGTSFADDENTVRNPTVTLFDALVAYDFAALDPKYRGFRAQINASNIFDRSYT ECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC TCQAGFCYRGAPATVIGSLIYRW EEECCCEECCCHHHHHHHHHHCC >Mature Secondary Structure SLRSAQSGLLLATTALTTVAFVQAAAAQDAAVQLNEISVEATRPAIAAPAGSGIGGGNV CCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEECCCCCCCCCCCC SGGDGGSAATSGGGGGPSGVTGYVARVSPTATKTNTPLIETPQSVSVVTREQLNDRNVQD CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCHHHHHHHHCCCCCHHH LAQAIAYTPGVSSSVFGFDPRYDAFYIRGFSATYNGIFRDGLRLNAVGLTIPRSEPYGLE HHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHCCHHHCCEEEEEEEEEECCCCCCCCE AVTILRGPASGLYGLGSPGGIVDSTSKRPVFVPFGEVQFQAGNYDRFQGNFDIGGPVAGT EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCEECCCCCCCCCCCCC DGTLAYRVTGVKRQSNTYLPGGDDDRTFIAPSFTWRPDSDTSFTFLSEYFESRLPGTSFF CCEEEEEEEEEEECCCCCCCCCCCCCEEECCCEEECCCCCCCHHHHHHHHHHHCCCCEEE YNDPGFRVTNFYSGDPAFNQYKQQQYRIGYAFEHKFSPDLIFRQNFRYYDVRADYDYTSI ECCCCCEEEEEECCCCHHHHHHHHHEEEEEEEECCCCCCEEEECCCEEEEEEECCCCCEE TGLNPARTLGSRTAGAYLDTLSQISLDNQLEGHFTTGPIQHTLIGGVDYAHYDYTRAFGF CCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCEEEECCEEEHHCCHHHHCCC GAAPDLNLLTLNYGQQVIARPRYTNFQSQAQDQIGAYLQEQAKLGRFVLTLTGRHDWVFQ CCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEE NTSDQTAGTVANQTDRAFSGRIGLNYLLTDFLVPYASYATTFTPQVGIDVNGNPFKAATG CCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCCCCCC DQIEAGVKVAIPNTNITTSFSGFDIVQSSLLRQDPNNIANQVATGSVESKGFEAELTANF CCCCCCEEEEECCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEEEEE APGTNLTLSYTHLDLRYLRQTSLVTGRPIDGNALSGIPGDSFTAFGTYLFAPSSPLAGLQ CCCCCEEEEEEEHHHHHHHHHHCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEE LGGGIRYAGTSFADDENTVRNPTVTLFDALVAYDFAALDPKYRGFRAQINASNIFDRSYT ECCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC TCQAGFCYRGAPATVIGSLIYRW EEECCCEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]