Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 170750487

GI number: 170750487

Start: 4346236

End: 4347156

Strand: Direct

Name: parB [H]

Synonym: Mrad2831_4094

Alternate gene names: 170750487

Gene position: 4346236-4347156 (Clockwise)

Preceding gene: 170750486

Following gene: 170750488

Centisome position: 71.51

GC content: 72.64

Gene sequence:

>921_bases
GTGTGGAGCGTGACACGGGTGGCGATCATGGCGGAGGAGGGGGCGAAGCCTCGACTGGGGCGCGGGCTCGCGGCGCTGAT
CGGTGACTTCAACGAGGCCGGCCGCGCCTCGGCCAAGGCCGAGGAGCAGCGCAGGGTCCAGATCGAGTTCCTGCGCGCCA
ACCCGCGCAACCCGCGCCGGAGCTTCGCCGAGACGGAGCTGTCCGAGCTGGCGGCCTCGATCGGTCAGCGGGGCATCATC
CAGCCGATCGTGGTCCGCCCGATCGGCGACGTGCCCGGGACCTACGAGATCGTGGCCGGCGAGCGGCGCTGGCGGGCCGC
CCAGCGCGCCGGCCTCGACGAGGTGCCGGTGGTGGTGGTCGAGATCGACGACCGCGGCTCGCTGGAATTCGCCATCCTGG
AGAACGTCCAGCGCACCGACCTCAACGCGATCGAGGAGGCGTCCGGGTACGAGCGCCTGATGAAGGATTTCTCGTACACC
CAGAAGGAGCTGGCCGAGATCCTGGGCAAGAGCCGCAGCCACCTCGCCAACACGCTCCGGCTGCTCAACCTGCCGCTGTC
CGTGCAGGAGCGGGTCACCGCCGGCGAGCTGACCGCCGGCCACGCCCGCGCGCTGCTGGCCGTGCGCGATCCCGAGGCGA
CGGCGCGCCGCGTCGTGGCCGAGAGCCTGTCGGTCCGGGACGTGGAGGCCATCGCCTCCGCGGAGGCTGCCCCGGCCGAG
ACGCCGCGCCCGGGGCGCCCGCGCCTCTCGGCCGAGCGCCCCGCGACGGTGCGCGACCTGGAGCTGCGGATCCACCGGGC
GCTCGGCGTCCCGGTCTCCTACAAGCCGAAGGACGCCGATTCGGGCGAGATCCGCATCCGTTACGAGACCCAGGACGAGC
TGCAGGCCCTGCTCAACCGGTTCAAGGTCTCGGACGCCTGA

Upstream 100 bases:

>100_bases
CAGGCCTACCTGCGCCTCGCCTCGGAGGTGATCCAGCGCGAGGGCCGGGTTCCGGCCGCGGCCTGACGGATTTGAGTCCC
CCTCCCGGTACGAGGGGCGA

Downstream 100 bases:

>100_bases
GGCGGCGCCGTCGGCGCCCCGTAGAGCGGAGGAGCGGAGCTTGGCCGAGCAGGGCGGCGCGGCGGCGCGGAAGTTCGACG
CCGACCGGGCCGGGGCGTAC

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRRSFAETELSELAASIGQRGII
QPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVVEIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYT
QKELAEILGKSRSHLANTLRLLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE
TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNRFKVSDA

Sequences:

>Translated_306_residues
MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRRSFAETELSELAASIGQRGII
QPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVVEIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYT
QKELAEILGKSRSHLANTLRLLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE
TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNRFKVSDA
>Mature_306_residues
MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRRSFAETELSELAASIGQRGII
QPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVVEIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYT
QKELAEILGKSRSHLANTLRLLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE
TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNRFKVSDA

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 33738; Mature: 33738

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRR
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHCEEEEEEECCCCCHHH
SFAETELSELAASIGQRGIIQPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVV
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEE
EIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYTQKELAEILGKSRSHLANTLR
EECCCCCEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE
HHCCCCHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH
FKVSDA
HCCCCC
>Mature Secondary Structure
MWSVTRVAIMAEEGAKPRLGRGLAALIGDFNEAGRASAKAEEQRRVQIEFLRANPRNPRR
CCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHCCCHHHHHHHHCEEEEEEECCCCCHHH
SFAETELSELAASIGQRGIIQPIVVRPIGDVPGTYEIVAGERRWRAAQRAGLDEVPVVVV
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECHHHHHHHHHCCCCCCCEEEE
EIDDRGSLEFAILENVQRTDLNAIEEASGYERLMKDFSYTQKELAEILGKSRSHLANTLR
EECCCCCEEHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLNLPLSVQERVTAGELTAGHARALLAVRDPEATARRVVAESLSVRDVEAIASAEAAPAE
HHCCCCHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
TPRPGRPRLSAERPATVRDLELRIHRALGVPVSYKPKDADSGEIRIRYETQDELQALLNR
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHH
FKVSDA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9054507 [H]