| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yheS [H]
Identifier: 170750472
GI number: 170750472
Start: 4331255
End: 4332877
Strand: Direct
Name: yheS [H]
Synonym: Mrad2831_4079
Alternate gene names: 170750472
Gene position: 4331255-4332877 (Clockwise)
Preceding gene: 170750470
Following gene: 170750473
Centisome position: 71.26
GC content: 69.62
Gene sequence:
>1623_bases ATGATACGCCTGGACAAGATCACCAAGCAGAACGGGCGGCAGCTCGTCTTCATCGAGGCCTCGGCCGCCCTGCAGCGGGG CGAGAAGGTCGGCCTGGTCGGCCCGAACGGGGCCGGCAAGACCACCCTGTTCCGGATGATCATCGGCCAGGAGCAGCCCG ACGAGGGGCAGGTCGCCGCCGACCGGGGCATCACCATCGGCTATTTCAGCCAGGATGTCGGCGAGATGTCGGGGCGCAGC GTCGTCACCGAGGTGATGGACGGCGCCGGCCCGGTGAGCGCGGTGGCGGCCGAGCTCGCCGAGCTCGGCGCGGCGCTCGC CGACCCGGACCGCGCCGACGAGATGGACGCCCTGGTCGAGCGCTACGGCGAGGTCCAGGCGCGGTTCGAGGAGCTCGACG GCTACGCCCTGGAGGGCCGGGCCCGCGAGGTGCTCGACGGGCTGAGCTTCAGCCAGGAGATGATGGACGGCGACGTCGGC GCCCTCTCGGGCGGCTGGAAGATGCGCGTCGCCCTCGCCCGCATCCTGCTGATGCGCCCGGACGTGATGCTCCTCGACGA GCCGTCGAACCACCTCGACATCGAGAGCCTGATCTGGCTCGAATCGTTCCTGAAGGGCTACGACGGCGCCCTGCTGATGA CCTCGCACGACCGCGAGTTCATGAACCGCATCGTCACCAAGATCATCGAGATCGACGCCGGCGCGCTCACCACCTACTCG GGCGACTACGCCTTCTACGAGGGCCAGCGGAAGCTCAACGAGGCGCAGGCCCAGGCGCAGTACGAGCGCCAGCAGGCCAT GCTGGCGAAGGAGATCGCCTTCATCGAGCGGTTCAAGGCCCGGGCCTCCCACGCCGCCCAGGTGCAGAGCCGGGTGAAGA AGCTCGACAAGATCGAGCGGGTCGAGCCGCCCCGGCGGCGGCAATCGGTGGCGTTCGAGTTCCAGCCGGCGCCGCGCTCG GGCGACGACGTCGTGATGCTCAAGGGCGTGAACAAGCGCTACGGCAGCCGCACGATCTACGAGGGGCTCGACTTCTCGGT GCGGCGCAAGGAGCGCTGGTGCGTGATGGGCATCAACGGCGCCGGCAAGTCGACGCTGCTGAAGCTCGTCACCGGCACCA CCGCGCCCGACGACGGCTCGGTCACGGTCGGCGGCAGCGTGAAGCTCGGCTACTTCGCCCAGCACGCCATGGACCTGCTC GAGGGCGACCGCACCGTGTTCCAGACCCTGGAGGATGCCTTCCCGCAGGCCGGCCAGGGGTCCCTGCGGGCGCTGGCCGG CTGCTTCGGCTTCTCGGGCGACGACGTCGAGAAGCGCTGCCGGGTGCTCTCGGGCGGCGAGAAGGCCCGGCTGGTCATGG CGCTGATGCTCTACGACCCGCCGAACTTCCTGGTGCTCGACGAGCCGACCAACCACCTCGACATGGGCACCAAGGAGATG CTGATCGAGGCGCTGGCCAACTACGAGGGGACGATGCTGTTCGTGTCCCACGACCGGCACTTCCTGGCCGCGCTGTCGAA CCGGGTGCTGGAGGTGACCCCGGAGGGCATCCACCAGTACGGCGGCGGCTACACCGAGTACGTGGCCCGCACCGGCCAGG AGGCGCCCGGCCTGCGCAGCTGA
Upstream 100 bases:
>100_bases CGCCGGACGCAAGCGTTATCCCGCACTGCGGCACCCCGCCTTTGCGCCGCGTCGGCCGATGCCGTAAGCGGCCGGGATAC TCCCGGACAGCGCCCGCCCC
Downstream 100 bases:
>100_bases GGGGCCACGCCGTCGTCGCGAGCGCAGCGAGGCGCCCCAGGGCAGCGCGACCTCGATCAGCGTGGCGCGGCTGGACGGCG TCGCTCCGCTCGCGGGGACG
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MIRLDKITKQNGRQLVFIEASAALQRGEKVGLVGPNGAGKTTLFRMIIGQEQPDEGQVAADRGITIGYFSQDVGEMSGRS VVTEVMDGAGPVSAVAAELAELGAALADPDRADEMDALVERYGEVQARFEELDGYALEGRAREVLDGLSFSQEMMDGDVG ALSGGWKMRVALARILLMRPDVMLLDEPSNHLDIESLIWLESFLKGYDGALLMTSHDREFMNRIVTKIIEIDAGALTTYS GDYAFYEGQRKLNEAQAQAQYERQQAMLAKEIAFIERFKARASHAAQVQSRVKKLDKIERVEPPRRRQSVAFEFQPAPRS GDDVVMLKGVNKRYGSRTIYEGLDFSVRRKERWCVMGINGAGKSTLLKLVTGTTAPDDGSVTVGGSVKLGYFAQHAMDLL EGDRTVFQTLEDAFPQAGQGSLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMALMLYDPPNFLVLDEPTNHLDMGTKEM LIEALANYEGTMLFVSHDRHFLAALSNRVLEVTPEGIHQYGGGYTEYVARTGQEAPGLRS
Sequences:
>Translated_540_residues MIRLDKITKQNGRQLVFIEASAALQRGEKVGLVGPNGAGKTTLFRMIIGQEQPDEGQVAADRGITIGYFSQDVGEMSGRS VVTEVMDGAGPVSAVAAELAELGAALADPDRADEMDALVERYGEVQARFEELDGYALEGRAREVLDGLSFSQEMMDGDVG ALSGGWKMRVALARILLMRPDVMLLDEPSNHLDIESLIWLESFLKGYDGALLMTSHDREFMNRIVTKIIEIDAGALTTYS GDYAFYEGQRKLNEAQAQAQYERQQAMLAKEIAFIERFKARASHAAQVQSRVKKLDKIERVEPPRRRQSVAFEFQPAPRS GDDVVMLKGVNKRYGSRTIYEGLDFSVRRKERWCVMGINGAGKSTLLKLVTGTTAPDDGSVTVGGSVKLGYFAQHAMDLL EGDRTVFQTLEDAFPQAGQGSLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMALMLYDPPNFLVLDEPTNHLDMGTKEM LIEALANYEGTMLFVSHDRHFLAALSNRVLEVTPEGIHQYGGGYTEYVARTGQEAPGLRS >Mature_540_residues MIRLDKITKQNGRQLVFIEASAALQRGEKVGLVGPNGAGKTTLFRMIIGQEQPDEGQVAADRGITIGYFSQDVGEMSGRS VVTEVMDGAGPVSAVAAELAELGAALADPDRADEMDALVERYGEVQARFEELDGYALEGRAREVLDGLSFSQEMMDGDVG ALSGGWKMRVALARILLMRPDVMLLDEPSNHLDIESLIWLESFLKGYDGALLMTSHDREFMNRIVTKIIEIDAGALTTYS GDYAFYEGQRKLNEAQAQAQYERQQAMLAKEIAFIERFKARASHAAQVQSRVKKLDKIERVEPPRRRQSVAFEFQPAPRS GDDVVMLKGVNKRYGSRTIYEGLDFSVRRKERWCVMGINGAGKSTLLKLVTGTTAPDDGSVTVGGSVKLGYFAQHAMDLL EGDRTVFQTLEDAFPQAGQGSLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMALMLYDPPNFLVLDEPTNHLDMGTKEM LIEALANYEGTMLFVSHDRHFLAALSNRVLEVTPEGIHQYGGGYTEYVARTGQEAPGLRS
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=33.5849056603774, Blast_Score=290, Evalue=3e-78, Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=32.6530612244898, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=32.6530612244898, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=31.9702602230483, Blast_Score=222, Evalue=7e-58, Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=31.9702602230483, Blast_Score=221, Evalue=1e-57, Organism=Escherichia coli, GI1789751, Length=527, Percent_Identity=37.3814041745731, Blast_Score=373, Evalue=1e-104, Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=34.6368715083799, Blast_Score=330, Evalue=2e-91, Organism=Escherichia coli, GI2367384, Length=507, Percent_Identity=33.9250493096647, Blast_Score=284, Evalue=8e-78, Organism=Escherichia coli, GI1787182, Length=530, Percent_Identity=33.7735849056604, Blast_Score=240, Evalue=2e-64, Organism=Escherichia coli, GI87081782, Length=541, Percent_Identity=24.9537892791128, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788165, Length=203, Percent_Identity=29.064039408867, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787758, Length=212, Percent_Identity=25.9433962264151, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788897, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789873, Length=230, Percent_Identity=26.9565217391304, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1787164, Length=197, Percent_Identity=30.9644670050761, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=33.9587242026266, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17555318, Length=523, Percent_Identity=33.2695984703633, Blast_Score=274, Evalue=9e-74, Organism=Caenorhabditis elegans, GI17559834, Length=535, Percent_Identity=30.2803738317757, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI71983516, Length=258, Percent_Identity=26.7441860465116, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71983510, Length=258, Percent_Identity=26.7441860465116, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71983523, Length=258, Percent_Identity=26.7441860465116, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI115534520, Length=210, Percent_Identity=27.6190476190476, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=204, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320874, Length=538, Percent_Identity=31.7843866171004, Blast_Score=265, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6321121, Length=548, Percent_Identity=29.5620437956204, Blast_Score=263, Evalue=5e-71, Organism=Saccharomyces cerevisiae, GI6325030, Length=266, Percent_Identity=31.203007518797, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324314, Length=414, Percent_Identity=26.8115942028986, Blast_Score=124, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323278, Length=442, Percent_Identity=26.4705882352941, Blast_Score=124, Evalue=5e-29, Organism=Drosophila melanogaster, GI24666836, Length=530, Percent_Identity=33.2075471698113, Blast_Score=295, Evalue=5e-80, Organism=Drosophila melanogaster, GI24642252, Length=515, Percent_Identity=32.621359223301, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI18859989, Length=515, Percent_Identity=32.621359223301, Blast_Score=271, Evalue=7e-73, Organism=Drosophila melanogaster, GI24641342, Length=538, Percent_Identity=28.6245353159851, Blast_Score=241, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 59347; Mature: 59347
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLDKITKQNGRQLVFIEASAALQRGEKVGLVGPNGAGKTTLFRMIIGQEQPDEGQVAA CCCCCCCCCCCCCEEEEEECHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEC DRGITIGYFSQDVGEMSGRSVVTEVMDGAGPVSAVAAELAELGAALADPDRADEMDALVE CCCCEEEECCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RYGEVQARFEELDGYALEGRAREVLDGLSFSQEMMDGDVGALSGGWKMRVALARILLMRP HHHHHHHHHHHCCCEEECCHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC DVMLLDEPSNHLDIESLIWLESFLKGYDGALLMTSHDREFMNRIVTKIIEIDAGALTTYS CEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEC GDYAFYEGQRKLNEAQAQAQYERQQAMLAKEIAFIERFKARASHAAQVQSRVKKLDKIER CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEPPRRRQSVAFEFQPAPRSGDDVVMLKGVNKRYGSRTIYEGLDFSVRRKERWCVMGING CCCCHHHCCEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCEEECCCCEEEEEECC AGKSTLLKLVTGTTAPDDGSVTVGGSVKLGYFAQHAMDLLEGDRTVFQTLEDAFPQAGQG CCHHHHHHHHCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC SLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMALMLYDPPNFLVLDEPTNHLDMGTKEM HHHHHHHHHCCCCCCHHHHHHHHCCCCHHHEEEEEEEECCCCEEEECCCCCCCCCCHHHH LIEALANYEGTMLFVSHDRHFLAALSNRVLEVTPEGIHQYGGGYTEYVARTGQEAPGLRS HHHHHHCCCCEEEEEECCCHHHHHHHCCEEEECCHHHHHHCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure MIRLDKITKQNGRQLVFIEASAALQRGEKVGLVGPNGAGKTTLFRMIIGQEQPDEGQVAA CCCCCCCCCCCCCEEEEEECHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEC DRGITIGYFSQDVGEMSGRSVVTEVMDGAGPVSAVAAELAELGAALADPDRADEMDALVE CCCCEEEECCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH RYGEVQARFEELDGYALEGRAREVLDGLSFSQEMMDGDVGALSGGWKMRVALARILLMRP HHHHHHHHHHHCCCEEECCHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC DVMLLDEPSNHLDIESLIWLESFLKGYDGALLMTSHDREFMNRIVTKIIEIDAGALTTYS CEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEC GDYAFYEGQRKLNEAQAQAQYERQQAMLAKEIAFIERFKARASHAAQVQSRVKKLDKIER CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEPPRRRQSVAFEFQPAPRSGDDVVMLKGVNKRYGSRTIYEGLDFSVRRKERWCVMGING CCCCHHHCCEEEEECCCCCCCCCEEEEECCCCCCCCCHHHCCCCCEEECCCCEEEEEECC AGKSTLLKLVTGTTAPDDGSVTVGGSVKLGYFAQHAMDLLEGDRTVFQTLEDAFPQAGQG CCHHHHHHHHCCCCCCCCCCEEECCCEEEHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC SLRALAGCFGFSGDDVEKRCRVLSGGEKARLVMALMLYDPPNFLVLDEPTNHLDMGTKEM HHHHHHHHHCCCCCCHHHHHHHHCCCCHHHEEEEEEEECCCCEEEECCCCCCCCCCHHHH LIEALANYEGTMLFVSHDRHFLAALSNRVLEVTPEGIHQYGGGYTEYVARTGQEAPGLRS HHHHHHCCCCEEEEEECCCHHHHHHHCCEEEECCHHHHHHCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]