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The map label for this gene is ypfJ [H]

Identifier: 170750470

GI number: 170750470

Start: 4329850

End: 4330689

Strand: Direct

Name: ypfJ [H]

Synonym: Mrad2831_4077

Alternate gene names: 170750470

Gene position: 4329850-4330689 (Clockwise)

Preceding gene: 170750469

Following gene: 170750472

Centisome position: 71.24

GC content: 68.69

Gene sequence:

>840_bases
ATGGGCTTTCCCGGCGGCGGCGCCGGCGGGCTCGGCATCGGCACCATCGTGGTGCTGCTGATCATCAGCTACTTCACGGG
CATTAACCCGGCGATCCTGATCGGCGGGGCCCAGCAGATCGGCGGCGGCGGCCGCAGCCAGCAGGAGCAGGTCGACCCGC
AGACCCAGGCCAAGCGGCGCCAGGCGCCCACCGACGAGAGCGGCCGGTTCGCCTCGAAGATCCTCGGCAACACCGAGGAC
GTGTGGAGCCAGATCCTGCCGCAGCAGACCGGCAAGCAGTACACCCCGACGACGCTGGTGCTCTACACCGGCGGCACCCG
CTCCGGCTGCGGCTCGGCCCAGGCCGCCATGGGCCCGTTCTACTGCCCGCTCGACAAGAAGGTCTATCTGGACACCGGCT
TCTTCAAGGAGATGGCCTCGAAGTTCGGCGTGAAGGGCGACTTCGCCTACGCGTACGTGATCGCCCACGAGGTCGGCCAC
CACGTCCAGGACGTGCTCGGCATCCTCGGCAAGGTCCAGGCCCGCCAGCAGCAGGCCTCCAGCAAGACCGAGGCGAACGC
CCTCTCGGTGCGGATCGAGCTGATGGCCGACTGCCTCGCCGGCGTCTGGGCCAAGAACTCCAACGACAAGTACGCCGAGC
TCGACAAGGGCGACATCGACGAGGCGCTGAACGCCGCCGCGCAGATCGGCGACGACGCGCTCCAGCAGCGCTCGCGGGGC
TACGTGGTGCCGGATTCCTTCACCCACGGCTCCTCGGCCCAGCGCCAGCGCTGGTTCATGGCCGGCTACAAGAGCGGCCA
GACCAAGTCCTGCGACACGTTCCGGACGGCCAACAACTGA

Upstream 100 bases:

>100_bases
GGCGCAGCATCGATGGCGGGACCCAACCATGCGCTGGGAAGATCTACGCAGCTCGGACAACGTCGAGGATCGGCGCGGTG
AAGGCGGCGGCGGGGGCGGC

Downstream 100 bases:

>100_bases
GGCCGGCTCGCGGCTGCGCGAGCTGGCTCCGTCGTCGCGAGCGGAGCGACGCGGCCCGGGGCAGCACGCCGTCGTCCGCT
GCGGCGCCGCTGGATCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MGFPGGGAGGLGIGTIVVLLIISYFTGINPAILIGGAQQIGGGGRSQQEQVDPQTQAKRRQAPTDESGRFASKILGNTED
VWSQILPQQTGKQYTPTTLVLYTGGTRSGCGSAQAAMGPFYCPLDKKVYLDTGFFKEMASKFGVKGDFAYAYVIAHEVGH
HVQDVLGILGKVQARQQQASSKTEANALSVRIELMADCLAGVWAKNSNDKYAELDKGDIDEALNAAAQIGDDALQQRSRG
YVVPDSFTHGSSAQRQRWFMAGYKSGQTKSCDTFRTANN

Sequences:

>Translated_279_residues
MGFPGGGAGGLGIGTIVVLLIISYFTGINPAILIGGAQQIGGGGRSQQEQVDPQTQAKRRQAPTDESGRFASKILGNTED
VWSQILPQQTGKQYTPTTLVLYTGGTRSGCGSAQAAMGPFYCPLDKKVYLDTGFFKEMASKFGVKGDFAYAYVIAHEVGH
HVQDVLGILGKVQARQQQASSKTEANALSVRIELMADCLAGVWAKNSNDKYAELDKGDIDEALNAAAQIGDDALQQRSRG
YVVPDSFTHGSSAQRQRWFMAGYKSGQTKSCDTFRTANN
>Mature_278_residues
GFPGGGAGGLGIGTIVVLLIISYFTGINPAILIGGAQQIGGGGRSQQEQVDPQTQAKRRQAPTDESGRFASKILGNTEDV
WSQILPQQTGKQYTPTTLVLYTGGTRSGCGSAQAAMGPFYCPLDKKVYLDTGFFKEMASKFGVKGDFAYAYVIAHEVGHH
VQDVLGILGKVQARQQQASSKTEANALSVRIELMADCLAGVWAKNSNDKYAELDKGDIDEALNAAAQIGDDALQQRSRGY
VVPDSFTHGSSAQRQRWFMAGYKSGQTKSCDTFRTANN

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=269, Percent_Identity=49.0706319702602, Blast_Score=241, Evalue=5e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 29829; Mature: 29698

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFPGGGAGGLGIGTIVVLLIISYFTGINPAILIGGAQQIGGGGRSQQEQVDPQTQAKRR
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCHHHCCHHHHHHHH
QAPTDESGRFASKILGNTEDVWSQILPQQTGKQYTPTTLVLYTGGTRSGCGSAQAAMGPF
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHCCCE
YCPLDKKVYLDTGFFKEMASKFGVKGDFAYAYVIAHEVGHHVQDVLGILGKVQARQQQAS
ECCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKTEANALSVRIELMADCLAGVWAKNSNDKYAELDKGDIDEALNAAAQIGDDALQQRSRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCC
YVVPDSFTHGSSAQRQRWFMAGYKSGQTKSCDTFRTANN
EECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GFPGGGAGGLGIGTIVVLLIISYFTGINPAILIGGAQQIGGGGRSQQEQVDPQTQAKRR
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCHHHCCHHHHHHHH
QAPTDESGRFASKILGNTEDVWSQILPQQTGKQYTPTTLVLYTGGTRSGCGSAQAAMGPF
CCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCHHHCCCE
YCPLDKKVYLDTGFFKEMASKFGVKGDFAYAYVIAHEVGHHVQDVLGILGKVQARQQQAS
ECCCCCEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKTEANALSVRIELMADCLAGVWAKNSNDKYAELDKGDIDEALNAAAQIGDDALQQRSRG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCC
YVVPDSFTHGSSAQRQRWFMAGYKSGQTKSCDTFRTANN
EECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]