| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750422
Identifier: 170750422
GI number: 170750422
Start: 4270852
End: 4271385
Strand: Reverse
Name: 170750422
Synonym: Mrad2831_4027
Alternate gene names: NA
Gene position: 4271385-4270852 (Counterclockwise)
Preceding gene: 170750423
Following gene: 170750419
Centisome position: 70.28
GC content: 73.78
Gene sequence:
>534_bases ATGCCGCTGATCGACCCCGCCCGCTCGCTCCTCCTCGTCATCGACGTTCAGACCCGGCTGATGCCGGCGATCGCCGACGG GGCCGGGGTCATCGCCAATACGGGCCGCCTCACCGCCGCCGCGAAGCTGCTCGACGTCCCGGTCCTGGTCACCGAGCAGA ATGCCGGGGGCCTCGGGCCGACCGTGCCGGCCCTGGCGCCCGAGCCCGGGACGGCCTTCACCAAGATGAGCTTCGGCGCG ACCCGGACGCCCGGCTTCCTGGAACGCCTGCCCGCGGACCGCGACCTCGTGGTCAGCGGCTGCGAGGCCCATGTCTGCGT GCTGCAGACGGTTCTCGGCCTGCGCGAGGCCGGCCGCGGGGTCGCCGTGGTGGCCGACGCCGTGGGCTCGCGGCGGGTCG AGAACCGGGAGGCCGCGCTCGCCCGGATGGCGGCCCACGGCGCCGAGATCGTCACCGCCGAGATGGTGGTGTTCGAGTGG CTCGGCACGGCGCGACACAGGCGGTTCCGCGACGTGGTGAGGCTCATCAAGTAG
Upstream 100 bases:
>100_bases TGCCGGCGGGCGCGGTCCCAAGCGGGCCCGATGGGGCGAGGATGCGGCGCGGGTGGCCCGCCCGTCCCCGTCGGGACCCG TCCGGAGGGATCACAGACCC
Downstream 100 bases:
>100_bases GCGCCGGGGCGGCGTCCGGGTCCCGCTGCGGAGCGCGCCTCAGGGGCCGTCGAGGGCCGCGCGGGTCTGCGGGTCGGGCC CGATATCGTCGGTGCCGGTC
Product: isochorismatase hydrolase
Products: NA
Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Isochorismatase Hydrolase Family Protein; Nicotinamidase-Like Amidase; Isochorismatase Family Hydrolase; Hydrolase; Amidase; Amidohydrolase; Hydrolase Isochorismatase; Amidase Related Nicotinamidase; YcaC Like Amidohydrolase; Isochorismatase Family; Nicotinamidase; YcaC-Related Amidohydrolase; Isochorismatase Domain-Containing; Isochorismatase Domain-Containing A; Isochorismatase Hydrolase Family; Hydrolase Isochorismatase Family
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MPLIDPARSLLLVIDVQTRLMPAIADGAGVIANTGRLTAAAKLLDVPVLVTEQNAGGLGPTVPALAPEPGTAFTKMSFGA TRTPGFLERLPADRDLVVSGCEAHVCVLQTVLGLREAGRGVAVVADAVGSRRVENREAALARMAAHGAEIVTAEMVVFEW LGTARHRRFRDVVRLIK
Sequences:
>Translated_177_residues MPLIDPARSLLLVIDVQTRLMPAIADGAGVIANTGRLTAAAKLLDVPVLVTEQNAGGLGPTVPALAPEPGTAFTKMSFGA TRTPGFLERLPADRDLVVSGCEAHVCVLQTVLGLREAGRGVAVVADAVGSRRVENREAALARMAAHGAEIVTAEMVVFEW LGTARHRRFRDVVRLIK >Mature_176_residues PLIDPARSLLLVIDVQTRLMPAIADGAGVIANTGRLTAAAKLLDVPVLVTEQNAGGLGPTVPALAPEPGTAFTKMSFGAT RTPGFLERLPADRDLVVSGCEAHVCVLQTVLGLREAGRGVAVVADAVGSRRVENREAALARMAAHGAEIVTAEMVVFEWL GTARHRRFRDVVRLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI209969695, Length=175, Percent_Identity=37.1428571428571, Blast_Score=109, Evalue=1e-24, Organism=Homo sapiens, GI13376007, Length=191, Percent_Identity=34.0314136125654, Blast_Score=99, Evalue=1e-21, Organism=Homo sapiens, GI103471987, Length=182, Percent_Identity=34.0659340659341, Blast_Score=98, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17540156, Length=176, Percent_Identity=37.5, Blast_Score=109, Evalue=6e-25, Organism=Drosophila melanogaster, GI21357489, Length=179, Percent_Identity=35.195530726257, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI19922924, Length=176, Percent_Identity=34.0909090909091, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18680; Mature: 18549
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIDPARSLLLVIDVQTRLMPAIADGAGVIANTGRLTAAAKLLDVPVLVTEQNAGGLGP CCCCCCCCCEEEEEECHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCEEEEECCCCCCCC TVPALAPEPGTAFTKMSFGATRTPGFLERLPADRDLVVSGCEAHVCVLQTVLGLREAGRG CCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC VAVVADAVGSRRVENREAALARMAAHGAEIVTAEMVVFEWLGTARHRRFRDVVRLIK EEEEEHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PLIDPARSLLLVIDVQTRLMPAIADGAGVIANTGRLTAAAKLLDVPVLVTEQNAGGLGP CCCCCCCCEEEEEECHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCEEEEECCCCCCCC TVPALAPEPGTAFTKMSFGATRTPGFLERLPADRDLVVSGCEAHVCVLQTVLGLREAGRG CCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCC VAVVADAVGSRRVENREAALARMAAHGAEIVTAEMVVFEWLGTARHRRFRDVVRLIK EEEEEHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA