| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is czcR [H]
Identifier: 170750394
GI number: 170750394
Start: 4248507
End: 4248872
Strand: Direct
Name: czcR [H]
Synonym: Mrad2831_3997
Alternate gene names: 170750394
Gene position: 4248507-4248872 (Clockwise)
Preceding gene: 170750393
Following gene: 170750395
Centisome position: 69.9
GC content: 69.95
Gene sequence:
>366_bases ATGGCGCGCATCCTCCTGGTGGATGACGAAGAGACCGTCCGGGGCTTCCTCAAGCGGGGGCTCGAGATCGACGGGCACGC GGTCGTCACGGCCAACGACGGCAGCGACGGACTCGACCGCCTCAACGAGGCCGACGGCGGCTTCGATCTGATGCTCACCG ACATCCGCATGCCGCTCATGGACGGCATCGCGCTGGCCCTCGCCGCCAAGCGCGACTTCCCCGACCTGACCATCCTGCTG ATGACCGGCTTCGCCGACCAGCGCGAGCGCGCGCGCGGGCTCGACGCCATCGTCACCGACGTGCTGACCAAGCCCTTCTC CCTGGCGGATCTCCGCGCCACCGTGAAGCGGGCGCTCGCCGCCTGA
Upstream 100 bases:
>100_bases GACTTGACAGACGGGGAATTCGTCTGTGTCTGTCGGCGTTTGGGCGCGCGCGCCGTCGCGACGGGTCGCGCGCGGATTTC GGGGACGGTTACGGGACCAC
Downstream 100 bases:
>100_bases CCTGGGCGGGATCGGTTCGGAAGAACTTAAACATTGCTCTTAGGTTGAGCTTCACGAAAGCGTGGCACCTTCGGTCCGAC TGGATCAGACCGAGCACGGA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MARILLVDDEETVRGFLKRGLEIDGHAVVTANDGSDGLDRLNEADGGFDLMLTDIRMPLMDGIALALAAKRDFPDLTILL MTGFADQRERARGLDAIVTDVLTKPFSLADLRATVKRALAA
Sequences:
>Translated_121_residues MARILLVDDEETVRGFLKRGLEIDGHAVVTANDGSDGLDRLNEADGGFDLMLTDIRMPLMDGIALALAAKRDFPDLTILL MTGFADQRERARGLDAIVTDVLTKPFSLADLRATVKRALAA >Mature_120_residues ARILLVDDEETVRGFLKRGLEIDGHAVVTANDGSDGLDRLNEADGGFDLMLTDIRMPLMDGIALALAAKRDFPDLTILLM TGFADQRERARGLDAIVTDVLTKPFSLADLRATVKRALAA
Specific function: Member of the two-component regulatory system CzcS/CzcR involved in the control of cobalt, zinc and cadmium homeostasis [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=118, Percent_Identity=39.8305084745763, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1790299, Length=124, Percent_Identity=35.4838709677419, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=35.8974358974359, Blast_Score=63, Evalue=5e-12, Organism=Escherichia coli, GI1786599, Length=116, Percent_Identity=34.4827586206897, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR006291 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13126; Mature: 12995
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARILLVDDEETVRGFLKRGLEIDGHAVVTANDGSDGLDRLNEADGGFDLMLTDIRMPLM CCEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHHHHHHHH DGIALALAAKRDFPDLTILLMTGFADQRERARGLDAIVTDVLTKPFSLADLRATVKRALA HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHC A C >Mature Secondary Structure ARILLVDDEETVRGFLKRGLEIDGHAVVTANDGSDGLDRLNEADGGFDLMLTDIRMPLM CEEEEECCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHCCCCCEEEEEHHHHHHHH DGIALALAAKRDFPDLTILLMTGFADQRERARGLDAIVTDVLTKPFSLADLRATVKRALA HHHHHHHHHCCCCCCEEEEEEECCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9044283 [H]