| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is cbbZ [H]
Identifier: 170750370
GI number: 170750370
Start: 4224821
End: 4225552
Strand: Reverse
Name: cbbZ [H]
Synonym: Mrad2831_3973
Alternate gene names: 170750370
Gene position: 4225552-4224821 (Counterclockwise)
Preceding gene: 170750371
Following gene: 170750368
Centisome position: 69.52
GC content: 76.23
Gene sequence:
>732_bases ATGACCCGGATGCCGGCCCGGATGCCGGCCGCGCCCGGGCCGGGTCTCGTCGTCCTCGACTTCGACGGCACGCTGGCCGA CAGCTTCGCGTGGTTCTGCTCGGTGCTGAACGGCGTCGCCGACCGCTACCGGTTCCGGCGGGTCGAGGCCCACGAGGTGG AGGAGCTCCGGCTCCAGGGCGCCCGGGCGATCGTCGCCCATCTCGGCATCCCGCGCTGGAAGCTGCCGCTCATCGCCCGC CACATGCACGCGCTGGCCGCGCGCGACGCCGCGCAGATCGCCCTGTTTCCCGGCGTCCCGGCGATGCTGGACGCGGTCGC GGAGGCGGGCGTGCCGCTGGCGATCCTGTCGTCGAATCGCGCCGACACGGTGCGGCGGGTGCTCGGGCCGGACAGTGCCG CCCGCATCGGCACCTACGCCTGCGGGGCGTCGATCTTCGGGAAGGCGCGCCGGCTGCGGGCGCTGCTCGCGCGGACCGGC GTGCCGCCGCACCGGGCCCTCTGCATCGGCGACGAGATCCGCGACCTCGAGGCGGCGCGCGCCCTCGGCTGCCCGTTCGG GGCCGTGGCCTGGGGCTACACCGACCCGCGGGCCCTCGCGTCCCTCGGCCCCGAGCACCTGTTCTCGGAGCCGGGAGAGA TCGCCCGCCTCGCGGCGGGCGGGGCCGGTCACATGCCGCGATTGGCGCCCGGCACGATGCTGGTGCCGCTGCCGCTGCCG AACGGCTCGTAG
Upstream 100 bases:
>100_bases AGCGTCGCCGGCCAGCTCGACGGGGTGCTGGAGCACGACTGGGCGCCGGGCGGTCTCCTGATGCGGCTCAGCGTCCCGCT CGAGAACCTGCGGACCTGAC
Downstream 100 bases:
>100_bases CGGGTCAGGCCGCGGAACAGCTGGCTGAGGAAGGCGCGGTCGGCGCCGCTCGTCGGCGTCGTGCGCTCGATGAAGTCGAA GATCCGGCCGTCCTGCAGGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: PGP; PGPase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTRMPARMPAAPGPGLVVLDFDGTLADSFAWFCSVLNGVADRYRFRRVEAHEVEELRLQGARAIVAHLGIPRWKLPLIAR HMHALAARDAAQIALFPGVPAMLDAVAEAGVPLAILSSNRADTVRRVLGPDSAARIGTYACGASIFGKARRLRALLARTG VPPHRALCIGDEIRDLEAARALGCPFGAVAWGYTDPRALASLGPEHLFSEPGEIARLAAGGAGHMPRLAPGTMLVPLPLP NGS
Sequences:
>Translated_243_residues MTRMPARMPAAPGPGLVVLDFDGTLADSFAWFCSVLNGVADRYRFRRVEAHEVEELRLQGARAIVAHLGIPRWKLPLIAR HMHALAARDAAQIALFPGVPAMLDAVAEAGVPLAILSSNRADTVRRVLGPDSAARIGTYACGASIFGKARRLRALLARTG VPPHRALCIGDEIRDLEAARALGCPFGAVAWGYTDPRALASLGPEHLFSEPGEIARLAAGGAGHMPRLAPGTMLVPLPLP NGS >Mature_242_residues TRMPARMPAAPGPGLVVLDFDGTLADSFAWFCSVLNGVADRYRFRRVEAHEVEELRLQGARAIVAHLGIPRWKLPLIARH MHALAARDAAQIALFPGVPAMLDAVAEAGVPLAILSSNRADTVRRVLGPDSAARIGTYACGASIFGKARRLRALLARTGV PPHRALCIGDEIRDLEAARALGCPFGAVAWGYTDPRALASLGPEHLFSEPGEIARLAAGGAGHMPRLAPGTMLVPLPLPN GS
Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.18 [H]
Molecular weight: Translated: 25708; Mature: 25577
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMPARMPAAPGPGLVVLDFDGTLADSFAWFCSVLNGVADRYRFRRVEAHEVEELRLQG CCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ARAIVAHLGIPRWKLPLIARHMHALAARDAAQIALFPGVPAMLDAVAEAGVPLAILSSNR HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCC ADTVRRVLGPDSAARIGTYACGASIFGKARRLRALLARTGVPPHRALCIGDEIRDLEAAR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHH ALGCPFGAVAWGYTDPRALASLGPEHLFSEPGEIARLAAGGAGHMPRLAPGTMLVPLPLP HHCCCCHHHCCCCCCHHHHHHCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCC NGS CCC >Mature Secondary Structure TRMPARMPAAPGPGLVVLDFDGTLADSFAWFCSVLNGVADRYRFRRVEAHEVEELRLQG CCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ARAIVAHLGIPRWKLPLIARHMHALAARDAAQIALFPGVPAMLDAVAEAGVPLAILSSNR HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCEEEECCCC ADTVRRVLGPDSAARIGTYACGASIFGKARRLRALLARTGVPPHRALCIGDEIRDLEAAR HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHH ALGCPFGAVAWGYTDPRALASLGPEHLFSEPGEIARLAAGGAGHMPRLAPGTMLVPLPLP HHCCCCHHHCCCCCCHHHHHHCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEECCC NGS CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8654968 [H]