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The map label for this gene is potC [H]

Identifier: 170750342

GI number: 170750342

Start: 4197542

End: 4198429

Strand: Direct

Name: potC [H]

Synonym: Mrad2831_3945

Alternate gene names: 170750342

Gene position: 4197542-4198429 (Clockwise)

Preceding gene: 170750341

Following gene: 170750343

Centisome position: 69.06

GC content: 71.62

Gene sequence:

>888_bases
ATGGACCAGCCCCGCGGCCGCGCCTTCTACCTGCTGGCGGCGGTCTTCGCCCTCTACGTCCTGTTCCTCTACGGGCCGAC
CCTGACGATCCTGGCGCTCAGCTTCCAGGGCCCGTCCGGCGGCTTGACCTTCCCGATGAACGGGGTCTCGACCCACTGGT
TCGCCAAGCTGTGGGAAGGCGTCGGCGTCGTCGACATCTGGGCGGCGTTCCGGCGCTCCCTGGCCCTCGGCCTCGCAGTG
ATGGCGCTCACCGTGGGGATCGCGTTCTACGCCGGCCTCGCCTTCCGGAAGGGGTTTCGCGGGGCCGGCCTCGTCTTCGC
CCTCGCCGTGTCGAGCCTGATCGTGCCCTCGATCGTGGTCTCGCTGGGGATCGGGCTGGAGTTCCGGCTCCTCGACGACG
CCGTGAAGGCCCTCGCGGCCGCGACCGGCTGGGGATTCCTGCAGGACCACGGCACGCTGATGGGCCTCTACACCTCGGCG
CTGGGGGCGCACCTCACTTGGACGCTGCCCTTCGGCCTGCTGATCATGTTCGCGGTGTTCAACCGGTTCGACCCGGCCTA
CGAGGAGGCCGCCCGCGACCTCGGCGCCAGCGGCCCGCAGACGCTCCGGCACGTGGTCGTGCCGATCCTCGCGCCCGCGC
TCGTCGGCGTCGCGCTGTTCGGCTTCACCCTGTCGTTCGACGAACTCGCCCGCACCAGCCAGGCGATCGGCGGCCGCAAC
ACCCTGCCGCTGGAGCTGCAGGGCCTGACCACCACGGTGACGACGCCGGAGATCTACGCCCTCGGCACGGTGACCACGGC
GGTCTCGGCGCTGGTGATCGGCACGGCGCTCGGCCTGACCCTGTGGCTGCAGAAGCGCCGGGCGCGGCGGGCGCTGGCGG
GCCTGTGA

Upstream 100 bases:

>100_bases
TTCCGGCCGCCGCCGCCAACGCCGTGGTGCTGCTCGCCGCGGTGCTGCTGATGATCCTGGGGCTCACCCGGATGATCGAC
CTCCGGCGGGAGCTGTAGCG

Downstream 100 bases:

>100_bases
TCGATGCCGGACGGTCAGGCCGCCATGGGTCGGCGGCGCCGCATTGCCAATCCGGCCCCGTCCGTGTAAGCGCACGGCGC
GCCCCCGAGACACCCTTGGA

Product: binding-protein-dependent transport systems inner membrane component

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MDQPRGRAFYLLAAVFALYVLFLYGPTLTILALSFQGPSGGLTFPMNGVSTHWFAKLWEGVGVVDIWAAFRRSLALGLAV
MALTVGIAFYAGLAFRKGFRGAGLVFALAVSSLIVPSIVVSLGIGLEFRLLDDAVKALAAATGWGFLQDHGTLMGLYTSA
LGAHLTWTLPFGLLIMFAVFNRFDPAYEEAARDLGASGPQTLRHVVVPILAPALVGVALFGFTLSFDELARTSQAIGGRN
TLPLELQGLTTTVTTPEIYALGTVTTAVSALVIGTALGLTLWLQKRRARRALAGL

Sequences:

>Translated_295_residues
MDQPRGRAFYLLAAVFALYVLFLYGPTLTILALSFQGPSGGLTFPMNGVSTHWFAKLWEGVGVVDIWAAFRRSLALGLAV
MALTVGIAFYAGLAFRKGFRGAGLVFALAVSSLIVPSIVVSLGIGLEFRLLDDAVKALAAATGWGFLQDHGTLMGLYTSA
LGAHLTWTLPFGLLIMFAVFNRFDPAYEEAARDLGASGPQTLRHVVVPILAPALVGVALFGFTLSFDELARTSQAIGGRN
TLPLELQGLTTTVTTPEIYALGTVTTAVSALVIGTALGLTLWLQKRRARRALAGL
>Mature_295_residues
MDQPRGRAFYLLAAVFALYVLFLYGPTLTILALSFQGPSGGLTFPMNGVSTHWFAKLWEGVGVVDIWAAFRRSLALGLAV
MALTVGIAFYAGLAFRKGFRGAGLVFALAVSSLIVPSIVVSLGIGLEFRLLDDAVKALAAATGWGFLQDHGTLMGLYTSA
LGAHLTWTLPFGLLIMFAVFNRFDPAYEEAARDLGASGPQTLRHVVVPILAPALVGVALFGFTLSFDELARTSQAIGGRN
TLPLELQGLTTTVTTPEIYALGTVTTAVSALVIGTALGLTLWLQKRRARRALAGL

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=246, Percent_Identity=27.2357723577236, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787714, Length=232, Percent_Identity=29.7413793103448, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31304; Mature: 31304

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQPRGRAFYLLAAVFALYVLFLYGPTLTILALSFQGPSGGLTFPMNGVSTHWFAKLWEG
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHCC
VGVVDIWAAFRRSLALGLAVMALTVGIAFYAGLAFRKGFRGAGLVFALAVSSLIVPSIVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLGIGLEFRLLDDAVKALAAATGWGFLQDHGTLMGLYTSALGAHLTWTLPFGLLIMFAVF
HHCCCCEEHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCEEEHHHHHHHHHHHHH
NRFDPAYEEAARDLGASGPQTLRHVVVPILAPALVGVALFGFTLSFDELARTSQAIGGRN
HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
TLPLELQGLTTTVTTPEIYALGTVTTAVSALVIGTALGLTLWLQKRRARRALAGL
CCCEEEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDQPRGRAFYLLAAVFALYVLFLYGPTLTILALSFQGPSGGLTFPMNGVSTHWFAKLWEG
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHCC
VGVVDIWAAFRRSLALGLAVMALTVGIAFYAGLAFRKGFRGAGLVFALAVSSLIVPSIVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLGIGLEFRLLDDAVKALAAATGWGFLQDHGTLMGLYTSALGAHLTWTLPFGLLIMFAVF
HHCCCCEEHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCEEEHHHHHHHHHHHHH
NRFDPAYEEAARDLGASGPQTLRHVVVPILAPALVGVALFGFTLSFDELARTSQAIGGRN
HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
TLPLELQGLTTTVTTPEIYALGTVTTAVSALVIGTALGLTLWLQKRRARRALAGL
CCCEEEECCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]