Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is mdoD [H]

Identifier: 170750300

GI number: 170750300

Start: 4151220

End: 4152734

Strand: Direct

Name: mdoD [H]

Synonym: Mrad2831_3903

Alternate gene names: 170750300

Gene position: 4151220-4152734 (Clockwise)

Preceding gene: 170750297

Following gene: 170750304

Centisome position: 68.3

GC content: 76.24

Gene sequence:

>1515_bases
ATGACCTTCGAGACGCTCTCGGCCGAGGCGGCGCGCCGCGCCGCCGCGCCCTACGCCGCACCGCCCGAGGATCTGCCGCC
GGCGCTCGCTGCCCTCGATTACGACGGCTACCGGGCGATCACCTTCCGGCCGGCTGCGAGCCTGCGGCTCGGCGCGCATT
TCAGCGCGCAGCTGTTCCACCGCGGCTTCCTGCAGCGCAGGCGCGTGGCGCTCCACCTCCAGCCGCTCCGGGGGCCCGCG
CGCCCGATCCCCTACGACACGCAGCTGTTCGACCTGGGCACGCGGCTCGCCGGCCAGAGCTTCCCGGCGGATCTCGGCTT
CGCGGGCTTCCGCCTGCACTACGCCTTCCCGGGCACCCCGGCCTGGCGGCCGAAGGGCTTCCAGGAGGAGTTCCTCGTCT
TCCTGGGCGCTTCCTACTTCCGCCTGCGCGCGGCCAACCAGGAATACGGGCTCTCGGCCCGGGGCCTCGCCATCGGCACC
GGCGCGCCGGAGGGCGAGGAATTTCCCGACTTCGTCGCGCACTGGATCTGCGAGCCGGAGCCGGAGGCGCGCACGCTCAC
GGTGCTCTCGCTCCTCGACAGCCCGAGCGTGGCCGGCGCCTACCGGTTCGAGATCGCGCCCGGCGATCCGGCCCGGATCG
CCGTCACCGCGGCGCTCCACCCGCGCCGGGCGCTCCCGAAGCTCGGGCTGGCGCCGCTCACCAGCATGTTCCTCTTCGGC
CAGAACGGGCCCGGGGCGCGGGGCGCGAAGCCCTTCGACGATTTCCGGCCGCAGGTGCACGATTCCGACGGCCTCTGCGT
CGCGGCCGGGGCCGACCCGGCGCGGCTCGACCGGATCTGGCGGCCCCTGGTCAACGGGCGCGCGCAGCCGCAGATCTCCG
CCTTCGCGGCCCGGCCGCTCGCCGGCTTCGGGCTGCTGCAGCGGGAGCGGAGCTTCGCGGCCTACCTCGACGTGGAGGCG
CGCCACGAGGCGCGGCCGGGCCTGTGGGTGGCGCCGGATCCCGCCGGGGGCGCCTTCGCGGACGGCGCCGTGCAGCTGTT
CGAGATCCCGTCGGGCGAGGAGTACATGGACAACATCGTGGCGGCCTTCGTGCCGGCCGCCCCGGCGCGGCCCGGCGCGC
CGCTGCACGTCGCCTACGGCCTGACCACGGTGGGGGCGGAGCCGGTGGCGGCGATCCCGGAGGCCGCCCTCGCCCGGGTG
ACGTCGACGCGGCTCGGCTCGGCGGAGCGCCTGCGCCCGTCGAACCCGCCCGACCCGCGGCGGCGGCTCTGCGTCATCGA
CTTCGAGGGTCCGGGCCTGCCGCGGGGTCCCGACGACGCGGTCGCCGCGGAGGTCTCGGCCAGCGCCGGGACGATGCACG
AGCCGGTCGCCAACTTCGTGCCGCAGACCGGCGGCTGGCGGATCTACGTCGAGTGGCGCCCGCCGGAGCCGGTGCCGCCG
GGCGACGTCGTGCTGCGCGCCCGGCTGGTCCGCGGGACCGTCCCCCTCAGCGAGACCTGGGACGCGGCCGTCTAG

Upstream 100 bases:

>100_bases
AGTCGTGGCCGCGGCTGCCGGCACGGTTCTACCTAGCGCGACTGATCTGAATGGGTCCAGAACGTGGGCCGGGCCGGCGC
TTCAGCCGCAGGGCGACGCG

Downstream 100 bases:

>100_bases
GTACCGGGATCGCGCCGCGGCGGCGCCGGACGGTTCGGGCCCGTTCAGGCGGTCCGGCGCTCCCGCTCCAGGCGCCGGGC
CAGGCGGGTGGCGCCGTAGA

Product: glucan biosynthesis protein D

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MTFETLSAEAARRAAAPYAAPPEDLPPALAALDYDGYRAITFRPAASLRLGAHFSAQLFHRGFLQRRRVALHLQPLRGPA
RPIPYDTQLFDLGTRLAGQSFPADLGFAGFRLHYAFPGTPAWRPKGFQEEFLVFLGASYFRLRAANQEYGLSARGLAIGT
GAPEGEEFPDFVAHWICEPEPEARTLTVLSLLDSPSVAGAYRFEIAPGDPARIAVTAALHPRRALPKLGLAPLTSMFLFG
QNGPGARGAKPFDDFRPQVHDSDGLCVAAGADPARLDRIWRPLVNGRAQPQISAFAARPLAGFGLLQRERSFAAYLDVEA
RHEARPGLWVAPDPAGGAFADGAVQLFEIPSGEEYMDNIVAAFVPAAPARPGAPLHVAYGLTTVGAEPVAAIPEAALARV
TSTRLGSAERLRPSNPPDPRRRLCVIDFEGPGLPRGPDDAVAAEVSASAGTMHEPVANFVPQTGGWRIYVEWRPPEPVPP
GDVVLRARLVRGTVPLSETWDAAV

Sequences:

>Translated_504_residues
MTFETLSAEAARRAAAPYAAPPEDLPPALAALDYDGYRAITFRPAASLRLGAHFSAQLFHRGFLQRRRVALHLQPLRGPA
RPIPYDTQLFDLGTRLAGQSFPADLGFAGFRLHYAFPGTPAWRPKGFQEEFLVFLGASYFRLRAANQEYGLSARGLAIGT
GAPEGEEFPDFVAHWICEPEPEARTLTVLSLLDSPSVAGAYRFEIAPGDPARIAVTAALHPRRALPKLGLAPLTSMFLFG
QNGPGARGAKPFDDFRPQVHDSDGLCVAAGADPARLDRIWRPLVNGRAQPQISAFAARPLAGFGLLQRERSFAAYLDVEA
RHEARPGLWVAPDPAGGAFADGAVQLFEIPSGEEYMDNIVAAFVPAAPARPGAPLHVAYGLTTVGAEPVAAIPEAALARV
TSTRLGSAERLRPSNPPDPRRRLCVIDFEGPGLPRGPDDAVAAEVSASAGTMHEPVANFVPQTGGWRIYVEWRPPEPVPP
GDVVLRARLVRGTVPLSETWDAAV
>Mature_503_residues
TFETLSAEAARRAAAPYAAPPEDLPPALAALDYDGYRAITFRPAASLRLGAHFSAQLFHRGFLQRRRVALHLQPLRGPAR
PIPYDTQLFDLGTRLAGQSFPADLGFAGFRLHYAFPGTPAWRPKGFQEEFLVFLGASYFRLRAANQEYGLSARGLAIGTG
APEGEEFPDFVAHWICEPEPEARTLTVLSLLDSPSVAGAYRFEIAPGDPARIAVTAALHPRRALPKLGLAPLTSMFLFGQ
NGPGARGAKPFDDFRPQVHDSDGLCVAAGADPARLDRIWRPLVNGRAQPQISAFAARPLAGFGLLQRERSFAAYLDVEAR
HEARPGLWVAPDPAGGAFADGAVQLFEIPSGEEYMDNIVAAFVPAAPARPGAPLHVAYGLTTVGAEPVAAIPEAALARVT
STRLGSAERLRPSNPPDPRRRLCVIDFEGPGLPRGPDDAVAAEVSASAGTMHEPVANFVPQTGGWRIYVEWRPPEPVPPG
DVVLRARLVRGTVPLSETWDAAV

Specific function: Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) [H]

COG id: COG3131

COG function: function code P; Periplasmic glucans biosynthesis protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the opgD/opgG family [H]

Homologues:

Organism=Escherichia coli, GI1787286, Length=504, Percent_Identity=34.7222222222222, Blast_Score=279, Evalue=3e-76,
Organism=Escherichia coli, GI145693128, Length=514, Percent_Identity=34.4357976653696, Blast_Score=227, Evalue=1e-60,

Paralogues:

None

Copy number: 280 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014438
- InterPro:   IPR007444
- InterPro:   IPR011013
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04349 MdoG [H]

EC number: NA

Molecular weight: Translated: 54121; Mature: 53990

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFETLSAEAARRAAAPYAAPPEDLPPALAALDYDGYRAITFRPAASLRLGAHFSAQLFH
CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEECCCHHHHHHH
RGFLQRRRVALHLQPLRGPARPIPYDTQLFDLGTRLAGQSFPADLGFAGFRLHYAFPGTP
HHHHHHCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC
AWRPKGFQEEFLVFLGASYFRLRAANQEYGLSARGLAIGTGAPEGEEFPDFVAHWICEPE
CCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCC
PEARTLTVLSLLDSPSVAGAYRFEIAPGDPARIAVTAALHPRRALPKLGLAPLTSMFLFG
CCCCEEEEEEHHCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHCCCCCHHHHHHHHEEC
QNGPGARGAKPFDDFRPQVHDSDGLCVAAGADPARLDRIWRPLVNGRAQPQISAFAARPL
CCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCH
AGFGLLQRERSFAAYLDVEARHEARPGLWVAPDPAGGAFADGAVQLFEIPSGEEYMDNIV
HHHHHHHHHCCEEEEEEEEHHHCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHH
AAFVPAAPARPGAPLHVAYGLTTVGAEPVAAIPEAALARVTSTRLGSAERLRPSNPPDPR
HHHCCCCCCCCCCCEEEEECEEECCCCCHHHCCHHHHHHHHHHHCCCHHHCCCCCCCCHH
RRLCVIDFEGPGLPRGPDDAVAAEVSASAGTMHEPVANFVPQTGGWRIYVEWRPPEPVPP
HEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCC
GDVVLRARLVRGTVPLSETWDAAV
CHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TFETLSAEAARRAAAPYAAPPEDLPPALAALDYDGYRAITFRPAASLRLGAHFSAQLFH
CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCEEECCCHHHHHHH
RGFLQRRRVALHLQPLRGPARPIPYDTQLFDLGTRLAGQSFPADLGFAGFRLHYAFPGTP
HHHHHHCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC
AWRPKGFQEEFLVFLGASYFRLRAANQEYGLSARGLAIGTGAPEGEEFPDFVAHWICEPE
CCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCC
PEARTLTVLSLLDSPSVAGAYRFEIAPGDPARIAVTAALHPRRALPKLGLAPLTSMFLFG
CCCCEEEEEEHHCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHCCCCCHHHHHHHHEEC
QNGPGARGAKPFDDFRPQVHDSDGLCVAAGADPARLDRIWRPLVNGRAQPQISAFAARPL
CCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCH
AGFGLLQRERSFAAYLDVEARHEARPGLWVAPDPAGGAFADGAVQLFEIPSGEEYMDNIV
HHHHHHHHHCCEEEEEEEEHHHCCCCCCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHH
AAFVPAAPARPGAPLHVAYGLTTVGAEPVAAIPEAALARVTSTRLGSAERLRPSNPPDPR
HHHCCCCCCCCCCCEEEEECEEECCCCCHHHCCHHHHHHHHHHHCCCHHHCCCCCCCCHH
RRLCVIDFEGPGLPRGPDDAVAAEVSASAGTMHEPVANFVPQTGGWRIYVEWRPPEPVPP
HEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCC
GDVVLRARLVRGTVPLSETWDAAV
CHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA