| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is bphG [H]
Identifier: 170750276
GI number: 170750276
Start: 4127185
End: 4128510
Strand: Direct
Name: bphG [H]
Synonym: Mrad2831_3879
Alternate gene names: 170750276
Gene position: 4127185-4128510 (Clockwise)
Preceding gene: 170750275
Following gene: 170750277
Centisome position: 67.91
GC content: 77.22
Gene sequence:
>1326_bases GTGACTCCCGAACCCGCCGGCATCGTCGTGGTCGGGGCCTCCCTCGCCGGCCTGCGCGGTGCCGAGGCGCTGCGGCGGGG CGGCTACGACGGGCCGCTCACCCTGGTCGGCGCCGAGCCGTACCGCCCCTACGACCGCCCGCCCCTGTCGAAGCACGTGC TCGCCGGGGAGCTCGCCGCCGACGCGACCCGGCTGCCGGAACTGGCCGAGCTCCGCGCCCGCTGGCGTCTCGGGAGCCCG GCCGTCGCCCTCGACCGGGCGGCCCGCACGCTCCGGCTCGCCGACGGGTCGACGCTCGCCTACGAGTCCCTGCTCATCGC CACCGGCGCCGAGGCCCGGCCCTGGCCGGCCGAGACCGGTGGCGGGCTCGCCGGCATCTTCACCCTGCGCGGGCGCGACG ACGCGGCCGCCCTGCGGGACGCCCTGGTGGCGCGCCCGCGGCAGGTGCTGATCGTGGGCGGCGGCCTGATCGGCTGCGAG GCGGCCTCCTGCCTGCGCGATCTGGGCCTGCCCGTGACCCTGGTCGACCCGAACGCCGCGCCCCTGGCCCGGGGTCTCGG GACCTTCGTCGGCAGCGTGATCGCCGAGTGCCTGCGCGCGTCCGGCGCCACGTTCCGCCCCGGCGCGACGGTGCGGGCGT TCGAGGGCGACGCGTCCGGGCACGTCGCCCGGGCCCGCCTGGCGGACGGCAGCACCATCGAGACCAACCTGGTCATCGTC GCCCTGGGGGCGACCCGGGCGACGGGCTGGCTGCGGGGTGCGGGCCTGCGCGCGGATGCCGGCGGGGTGACCTGCGACGC GGCCTGCCGGGTCCTCGACGCCGACAGGGTGCCCTGCCCGGACATCTACGCCGCGGGCGACGTCGCCCGGTGGCCGATCC CCCTCTACGGCAACCGCCTGATCGCCGTGGAGCACTGGGGCAACGCCGTCGAGCAGGCCGCGCACGCGGCGCGCAACATG CTGGCCGACCCCGGCGACCAGCGCCCCTACGGTCACCTTCCGGCCTTCTGGTCGAGCCAGTTCGGGATCAACATCAAGCT GGTCGGCCTCCCCGACGGGGCCGATTCCGTGGCGGTGGTGCAGGGTTCGCGGGCCTCCCGGCGCTTCCTCGCCGTATACG GCCGCGCCGGGCGCAGCATCGCGGCCGTCTCGTTCGATCAGGCCCGCTGGCTGCCGGCCTACGCGGAGGCGATCACGGCC GGCGATCCGTTCCCGCCGATCACCGACGCCACCGACCGGCCGCGCGTCGAGATGGCGGTCCCGGGCTTCCCGCCGCCGCA CCGAGCCGCCGAGGCGCGGCCTTCCGCCGAGACCGTCCATGTCTGA
Upstream 100 bases:
>100_bases CGCCGCCGGCCGAGCGGCGCGGCGCCATCGAGCGGGCGCTGCAGGCCTGCCCGGTCCGCGCCATCAGCCTCCAGGCCGGC CCGGACGACGGGGGCGCGCC
Downstream 100 bases:
>100_bases CGACGCGCTGTTCGCCGCCGTGATGGATCCGGCCAACCGGGCCGACCCGTACCCGCTCTATCGACGGATGCGGCAGCAGC CGGTCTCGCGCCAGCGCGAC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MTPEPAGIVVVGASLAGLRGAEALRRGGYDGPLTLVGAEPYRPYDRPPLSKHVLAGELAADATRLPELAELRARWRLGSP AVALDRAARTLRLADGSTLAYESLLIATGAEARPWPAETGGGLAGIFTLRGRDDAAALRDALVARPRQVLIVGGGLIGCE AASCLRDLGLPVTLVDPNAAPLARGLGTFVGSVIAECLRASGATFRPGATVRAFEGDASGHVARARLADGSTIETNLVIV ALGATRATGWLRGAGLRADAGGVTCDAACRVLDADRVPCPDIYAAGDVARWPIPLYGNRLIAVEHWGNAVEQAAHAARNM LADPGDQRPYGHLPAFWSSQFGINIKLVGLPDGADSVAVVQGSRASRRFLAVYGRAGRSIAAVSFDQARWLPAYAEAITA GDPFPPITDATDRPRVEMAVPGFPPPHRAAEARPSAETVHV
Sequences:
>Translated_441_residues MTPEPAGIVVVGASLAGLRGAEALRRGGYDGPLTLVGAEPYRPYDRPPLSKHVLAGELAADATRLPELAELRARWRLGSP AVALDRAARTLRLADGSTLAYESLLIATGAEARPWPAETGGGLAGIFTLRGRDDAAALRDALVARPRQVLIVGGGLIGCE AASCLRDLGLPVTLVDPNAAPLARGLGTFVGSVIAECLRASGATFRPGATVRAFEGDASGHVARARLADGSTIETNLVIV ALGATRATGWLRGAGLRADAGGVTCDAACRVLDADRVPCPDIYAAGDVARWPIPLYGNRLIAVEHWGNAVEQAAHAARNM LADPGDQRPYGHLPAFWSSQFGINIKLVGLPDGADSVAVVQGSRASRRFLAVYGRAGRSIAAVSFDQARWLPAYAEAITA GDPFPPITDATDRPRVEMAVPGFPPPHRAAEARPSAETVHV >Mature_440_residues TPEPAGIVVVGASLAGLRGAEALRRGGYDGPLTLVGAEPYRPYDRPPLSKHVLAGELAADATRLPELAELRARWRLGSPA VALDRAARTLRLADGSTLAYESLLIATGAEARPWPAETGGGLAGIFTLRGRDDAAALRDALVARPRQVLIVGGGLIGCEA ASCLRDLGLPVTLVDPNAAPLARGLGTFVGSVIAECLRASGATFRPGATVRAFEGDASGHVARARLADGSTIETNLVIVA LGATRATGWLRGAGLRADAGGVTCDAACRVLDADRVPCPDIYAAGDVARWPIPLYGNRLIAVEHWGNAVEQAAHAARNML ADPGDQRPYGHLPAFWSSQFGINIKLVGLPDGADSVAVVQGSRASRRFLAVYGRAGRSIAAVSFDQARWLPAYAEAITAG DPFPPITDATDRPRVEMAVPGFPPPHRAAEARPSAETVHV
Specific function: Part of the electron transfer component of biphenyl dioxygenase, transfers electrons from ferredoxin (BphF) to NADH [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial ring-hydroxylating dioxygenase ferredoxin reductase family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=405, Percent_Identity=28.1481481481481, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI226437568, Length=405, Percent_Identity=28.1481481481481, Blast_Score=158, Evalue=8e-39, Organism=Homo sapiens, GI65787454, Length=405, Percent_Identity=28.1481481481481, Blast_Score=158, Evalue=8e-39, Organism=Homo sapiens, GI22202629, Length=339, Percent_Identity=27.7286135693215, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI4757732, Length=339, Percent_Identity=27.7286135693215, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1788892, Length=399, Percent_Identity=31.5789473684211, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1789065, Length=290, Percent_Identity=32.4137931034483, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1789765, Length=299, Percent_Identity=27.0903010033445, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17559934, Length=399, Percent_Identity=25.8145363408521, Blast_Score=131, Evalue=7e-31, Organism=Drosophila melanogaster, GI24639257, Length=401, Percent_Identity=25.9351620947631, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI281359715, Length=401, Percent_Identity=25.9351620947631, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI281359713, Length=401, Percent_Identity=25.9351620947631, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24639250, Length=401, Percent_Identity=25.9351620947631, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI18543267, Length=401, Percent_Identity=25.9351620947631, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24639252, Length=401, Percent_Identity=25.9351620947631, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24585130, Length=397, Percent_Identity=27.2040302267003, Blast_Score=116, Evalue=4e-26, Organism=Drosophila melanogaster, GI28573993, Length=374, Percent_Identity=25.9358288770053, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI24581020, Length=374, Percent_Identity=25.9358288770053, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.18.1.3 [H]
Molecular weight: Translated: 45911; Mature: 45779
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEPAGIVVVGASLAGLRGAEALRRGGYDGPLTLVGAEPYRPYDRPPLSKHVLAGELAA CCCCCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH DATRLPELAELRARWRLGSPAVALDRAARTLRLADGSTLAYESLLIATGAEARPWPAETG HHHCCHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCEEHHHEEEEECCCCCCCCCCCCC GGLAGIFTLRGRDDAAALRDALVARPRQVLIVGGGLIGCEAASCLRDLGLPVTLVDPNAA CCEEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCCEEEECCCCH PLARGLGTFVGSVIAECLRASGATFRPGATVRAFEGDASGHVARARLADGSTIETNLVIV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEECEEEEE ALGATRATGWLRGAGLRADAGGVTCDAACRVLDADRVPCPDIYAAGDVARWPIPLYGNRL EECCCCCCCHHCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCEECCCCCCCCCCCCCCEE IAVEHWGNAVEQAAHAARNMLADPGDQRPYGHLPAFWSSQFGINIKLVGLPDGADSVAVV EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEE QGSRASRRFLAVYGRAGRSIAAVSFDQARWLPAYAEAITAGDPFPPITDATDRPRVEMAV ECCCCCCEEEEEECCCCCEEEEEECCCHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEC PGFPPPHRAAEARPSAETVHV CCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TPEPAGIVVVGASLAGLRGAEALRRGGYDGPLTLVGAEPYRPYDRPPLSKHVLAGELAA CCCCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH DATRLPELAELRARWRLGSPAVALDRAARTLRLADGSTLAYESLLIATGAEARPWPAETG HHHCCHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCEEHHHEEEEECCCCCCCCCCCCC GGLAGIFTLRGRDDAAALRDALVARPRQVLIVGGGLIGCEAASCLRDLGLPVTLVDPNAA CCEEEEEEEECCCHHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCCEEEECCCCH PLARGLGTFVGSVIAECLRASGATFRPGATVRAFEGDASGHVARARLADGSTIETNLVIV HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEECCCCEEECEEEEE ALGATRATGWLRGAGLRADAGGVTCDAACRVLDADRVPCPDIYAAGDVARWPIPLYGNRL EECCCCCCCHHCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCEECCCCCCCCCCCCCCEE IAVEHWGNAVEQAAHAARNMLADPGDQRPYGHLPAFWSSQFGINIKLVGLPDGADSVAVV EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEE QGSRASRRFLAVYGRAGRSIAAVSFDQARWLPAYAEAITAGDPFPPITDATDRPRVEMAV ECCCCCCEEEEEECCCCCEEEEEECCCHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEC PGFPPPHRAAEARPSAETVHV CCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1569021 [H]