| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is phnN [C]
Identifier: 170750247
GI number: 170750247
Start: 4100390
End: 4100920
Strand: Reverse
Name: phnN [C]
Synonym: Mrad2831_3849
Alternate gene names: 170750247
Gene position: 4100920-4100390 (Counterclockwise)
Preceding gene: 170750248
Following gene: 170750245
Centisome position: 67.47
GC content: 78.15
Gene sequence:
>531_bases ATGCCGGGCTGCCTCGTCCTCGTGGTCGGCCCGAGCGGGGCCGGCAAGGATACGCTGCTCCGGCTCGCCCGGGCGGCCCT GGCCGGCGACCCGCGCTACGTCTTCCCGCGCCGCCTCGTCACCCGGCCGCCCTCGGCCGACGAGGACAACGACGAGATCG ACGAGGCCGCCTTCGCCGAGGGCTGCGCGGCCGGGCGCTTCACCCTGAGCTGGCGCGCCCACGGTCTCGGCTACGCGCTG CCGGAGGCGGTCGGCCGGCGGGTCGCGGAAGGCCACGTGGTGGTCTGCAACGTCTCGCGCCGCGTCGTCGCGGGCGCGCG GGAGTCTGGCCGGCGGGTGAGCGTCGTCGAGATCACGGCGCCGCCCGAGATCCTGGCGCGGCGCATCGCCGCCCGCGGCC GCGCGCAGGACGGCGACCTGGCCGCGCGTCTCGCCCGCGAGGGCGGCGTCACCGCGGACCTGACGATCCTCAACACCGGC GCCGCGGACGAGGCGGCCGCGCGGCTGGTCGCGCATCTGCGCGCCTGCTGA
Upstream 100 bases:
>100_bases CCCTGGCGCCCGGACTGCGGGCCGATCTCGTGCGCGTGCAGCGGGCCGAGGGGGTTCCGGTGGTCCGCGAGGTCTGGCGC GCCGGGCGGCGCGTCGCCTG
Downstream 100 bases:
>100_bases CGGGGCTAGCGCGCGGCGGTCCGCGCGGACGCGCCGGCCGCACGGTGCGTGAGCCACGAAAAAGGGCGGGCGCCGACACC GGCACCCGCCCTCGCTCGGA
Product: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
Products: NA
Alternate protein names: TdRPase 1 [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MPGCLVLVVGPSGAGKDTLLRLARAALAGDPRYVFPRRLVTRPPSADEDNDEIDEAAFAEGCAAGRFTLSWRAHGLGYAL PEAVGRRVAEGHVVVCNVSRRVVAGARESGRRVSVVEITAPPEILARRIAARGRAQDGDLAARLAREGGVTADLTILNTG AADEAAARLVAHLRAC
Sequences:
>Translated_176_residues MPGCLVLVVGPSGAGKDTLLRLARAALAGDPRYVFPRRLVTRPPSADEDNDEIDEAAFAEGCAAGRFTLSWRAHGLGYAL PEAVGRRVAEGHVVVCNVSRRVVAGARESGRRVSVVEITAPPEILARRIAARGRAQDGDLAARLAREGGVTADLTILNTG AADEAAARLVAHLRAC >Mature_175_residues PGCLVLVVGPSGAGKDTLLRLARAALAGDPRYVFPRRLVTRPPSADEDNDEIDEAAFAEGCAAGRFTLSWRAHGLGYALP EAVGRRVAEGHVVVCNVSRRVVAGARESGRRVSVVEITAPPEILARRIAARGRAQDGDLAARLAREGGVTADLTILNTGA ADEAAARLVAHLRAC
Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]
COG id: COG3709
COG function: function code P; Uncharacterized component of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790532, Length=162, Percent_Identity=33.3333333333333, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR012699 - InterPro: IPR013102 - InterPro: IPR000053 - InterPro: IPR017872 - InterPro: IPR013466 [H]
Pfam domain/function: PF00591 Glycos_transf_3; PF07831 PYNP_C [H]
EC number: =2.4.2.4 [H]
Molecular weight: Translated: 18440; Mature: 18309
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGCLVLVVGPSGAGKDTLLRLARAALAGDPRYVFPRRLVTRPPSADEDNDEIDEAAFAE CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCHHHHCCCCCCCCCCCHHHHHHHHH GCAAGRFTLSWRAHGLGYALPEAVGRRVAEGHVVVCNVSRRVVAGARESGRRVSVVEITA CCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCEEEEEEECC PPEILARRIAARGRAQDGDLAARLAREGGVTADLTILNTGAADEAAARLVAHLRAC CHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure PGCLVLVVGPSGAGKDTLLRLARAALAGDPRYVFPRRLVTRPPSADEDNDEIDEAAFAE CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEECCHHHHCCCCCCCCCCCHHHHHHHHH GCAAGRFTLSWRAHGLGYALPEAVGRRVAEGHVVVCNVSRRVVAGARESGRRVSVVEITA CCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCEECCCCCCCCEEEEEEECC PPEILARRIAARGRAQDGDLAARLAREGGVTADLTILNTGAADEAAARLVAHLRAC CHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA