Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170750240

Identifier: 170750240

GI number: 170750240

Start: 4093224

End: 4094867

Strand: Reverse

Name: 170750240

Synonym: Mrad2831_3842

Alternate gene names: NA

Gene position: 4094867-4093224 (Counterclockwise)

Preceding gene: 170750241

Following gene: 170750239

Centisome position: 67.37

GC content: 68.07

Gene sequence:

>1644_bases
ATGCGATGCACCCTGACGGTCACCTCCAAGCGACGCATCCTGTGCGTCTTTCCCGCCTACACGCCGTCCTTCGGGACATT
CTCCCACGCCTACCCGCTGATGGGCGGGGTGAAGGCGTTCATGCCGCCGCAGGGGCTGCTGCTGATCGCGGCCTACATGC
CCGAGGCGTGGGAATGTCGGTTCATCGATGAGAATATCCGCCGCGCCGGCCCGGCCGACTTCGCCTGGGCCGACGCGGTC
TTCGTCTCCGGGATGCACATCCAGGAGCCGCAGATCCACGACATCCGCGACCGCGCCCGCGCCGCCGGCAAGGTCACGGT
GCTGGGCGGCCCCTCGGTCTCGGGCGCCCCGGAGAAGTACGGCGACTTCGACTACCTCCATATAGGCGAGATCGGCGACG
CCACCGACCAGCTCGTCGCGCGCCTCGACGGCGACGTCACCCCGCCGCCCGACCAGGTGGTGCTGGAGACGAAGGACCGC
CTCGCGCTCGCCGACTTCCCGGCCCCGGCCTACGAGCACGCGCCGCTCAAGCGCTACCTGATCGGCTCGCTGCAGTTCTC
CTCGGGCTGCCCCTACCGCTGCGAGTTCTGCGACATCCCGCAGCTCTACGGCCGCCAGCCCCGCCTGAAGAGTCCCGAGC
AGATGTGCGCCGAGCTCGACGCCATCGTCAGCCAGCCGGGCCATCCGGCGGTGGTCTACTTCGTCGACGACAATTTCATC
GGCAACCGCAAGGCGACGCGCGAGATGCTGCCGCACCTCGTCGCGTGGCAGAAGAAGAACAACTACCCGCTCCAGTTCGC
CTGCGAGGCGACGCTGAACATGGCCAAGCAGCCCGAGATCCTCGAGCTGATGCGGCAGGCCAACTTCATGACGGTGTTCG
TCGGCATCGAGACGCCGGAGGCGGAGGCGCTCAAGGGCATCGACAAGACCCACAACGCCGCCGTGCCGATGTACGAGGCG
ATCGAGACCCTCAATTCCTACGGCCTGGAGGTGACCTCCGGCATCATCCTCGGTCTCGACTCCGACACCGACAAGTCCGA
GCAGAACCTGATCGACTTCATCGACCGCTCGGCCATCCCGGTCCTGACCATCAACCTGCTCCAGGCGCTGCCCAAGACCC
CGCTCTGGGACCGGCTGGAGCGCGAGGGCCGGCTGCTGCACGACGCCAGCCTCGAGTCGAACGTGCTGTTCAAGCGGCCC
CACGATTCGGTGGTGTCGAGCTGGCGCCGGGCGATCGCGCACGCCTACGAGCCCGAGAAGATCTTCGAGCGGTTCAAGCA
CCAGTGCGCGGTGACCTACCCGAACCGGATCACCACGCCGACGGCCGGCAAGCTGACCTTCACCAACCTGCGCCGCGGCC
TGATCCTGGGCTTCAACATCATCACCCGGGTCGGGATCTTCTCCGACTACCGCAAGCCGTTCTGGAGCGCGGCCGGCTAC
GCGCTGAAGCGCGGGCAGATCGAGGCGGTGTTCAACATGGGCTTCGTGGCCCACCACCTGATCCGCTTCACCCGCGAGGC
CCTGCGCGGCGAGCACAACGCCTCGTTCTACGCCGCGAAGGCCGCGGAGGCGAAGGCCGCCCGCGACCGGAGCTGGTGGG
AGGCGGCGCGGCGCAAGCTCGTGCCGGAGCGCGAGGCGGCGTAG

Upstream 100 bases:

>100_bases
AGACAAGCCGCGGTGGCCGCCACCGGGCCCGCGCTCCTCACGCCATTCTTAACCGCCGAGGGGGGGCGCCAACGGCCGCG
GCTGTGCTAGATAGGGCGCC

Downstream 100 bases:

>100_bases
CCCGGGTCCCGGGCCCGTCGGAGCGATGCAGCCGCGGCAGGGCTCCCGAGCAAGTCCTTGCCTGCGGCGGAAAAGTCGCG
TTCCGGCCCTTGGCAGGCGG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: ORF N [H]

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECRFIDENIRRAGPADFAWADAV
FVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKYGDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDR
LALADFPAPAYEHAPLKRYLIGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI
GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPEAEALKGIDKTHNAAVPMYEA
IETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIPVLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRP
HDSVVSSWRRAIAHAYEPEKIFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY
ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKLVPEREAA

Sequences:

>Translated_547_residues
MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECRFIDENIRRAGPADFAWADAV
FVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKYGDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDR
LALADFPAPAYEHAPLKRYLIGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI
GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPEAEALKGIDKTHNAAVPMYEA
IETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIPVLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRP
HDSVVSSWRRAIAHAYEPEKIFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY
ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKLVPEREAA
>Mature_547_residues
MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECRFIDENIRRAGPADFAWADAV
FVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKYGDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDR
LALADFPAPAYEHAPLKRYLIGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI
GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPEAEALKGIDKTHNAAVPMYEA
IETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIPVLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRP
HDSVVSSWRRAIAHAYEPEKIFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY
ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKLVPEREAA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61385; Mature: 61385

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECR
CEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEE
FIDENIRRAGPADFAWADAVFVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKY
ECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCHHC
GDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDRLALADFPAPAYEHAPLKRYL
CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHH
IGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI
HHCEEECCCCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPE
CCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCH
AEALKGIDKTHNAAVPMYEAIETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIP
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHCCCCH
VLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRPHDSVVSSWRRAIAHAYEPEK
HHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH
IFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY
HHHHHHHCEEEECCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHCC
VPEREAA
CCCCCCC
>Mature Secondary Structure
MRCTLTVTSKRRILCVFPAYTPSFGTFSHAYPLMGGVKAFMPPQGLLLIAAYMPEAWECR
CEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCHHHCCCCCCEEEEEECCCCCCEEE
FIDENIRRAGPADFAWADAVFVSGMHIQEPQIHDIRDRARAAGKVTVLGGPSVSGAPEKY
ECCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCHHC
GDFDYLHIGEIGDATDQLVARLDGDVTPPPDQVVLETKDRLALADFPAPAYEHAPLKRYL
CCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCHHHHH
IGSLQFSSGCPYRCEFCDIPQLYGRQPRLKSPEQMCAELDAIVSQPGHPAVVYFVDDNFI
HHCEEECCCCCCEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCC
GNRKATREMLPHLVAWQKKNNYPLQFACEATLNMAKQPEILELMRQANFMTVFVGIETPE
CCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHCCEEEEEEEECCCH
AEALKGIDKTHNAAVPMYEAIETLNSYGLEVTSGIILGLDSDTDKSEQNLIDFIDRSAIP
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHHCCCCH
VLTINLLQALPKTPLWDRLEREGRLLHDASLESNVLFKRPHDSVVSSWRRAIAHAYEPEK
HHHHHHHHHCCCCCCHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH
IFERFKHQCAVTYPNRITTPTAGKLTFTNLRRGLILGFNIITRVGIFSDYRKPFWSAAGY
HHHHHHHCEEEECCCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKRGQIEAVFNMGFVAHHLIRFTREALRGEHNASFYAAKAAEAKAARDRSWWEAARRKL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCHHHHHHHHHCC
VPEREAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231; 8467083 [H]