| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yoaE [H]
Identifier: 170750212
GI number: 170750212
Start: 4059600
End: 4061738
Strand: Reverse
Name: yoaE [H]
Synonym: Mrad2831_3814
Alternate gene names: 170750212
Gene position: 4061738-4059600 (Counterclockwise)
Preceding gene: 170750217
Following gene: 170750205
Centisome position: 66.83
GC content: 68.21
Gene sequence:
>2139_bases ATGAACGAGATCGTCCAGCCCGAGGCCTACTCGGAGGTCTTCTACGGCGCCTGCCCGCACGATTGCCCCGACACCTGCTC GATGCTCTTCGAGGTGAAGGGCGGCGAGCTCCTGAGCGTGCGCGGCAACCCGGACCACCCGATGACCCGCGGCGGTCTCT GCGTGAAGCTGAAGGATTACGAGAAGCGCCACTACCACCCGGACCGTGTGCTCTACCCGATGAAGCGCGTCGGCCCGAAG GGCTCCAAGCAGTTCGAGCGGATCACCTGGGACGAGGCGCTCGACACGATCGTCGACCGCTGGACGGCGATCATCGACCG GTACGGGCCGCAGGCCATCGCGCCCTACAGCTACCTCGGCAACCAGGGCCTCGTGCACGGTCTGAACGGCGGCGACGCCT TCTTCAACCGCCTGGGCGCCACCGTGACCGAGCGGACGTTCTGCGGCGAGGGCTCGTGCACGGCCTGGCTCCTCACCGTC GGGCCGACGGCCGGCCTCGATCCCGAGAGCTACATCCACTCCAAGTACATCGTGATCTGGGCCTGCAACTCGGTCAGCAC CAATCTGCACCACTGGGCGATCGTGAAGGACGCCCAGAAGAAGGGCGCGAAGGTCGTCGTCATCGACGCCTACGCCTCGC GCACCGCGAAGGCCGCGGACTGGCACATCGCGCCGAGGCCGGGCACCGACGGCGCGCTCGCCATGGCGCTGATCAACTCC ATCATCGCGCAGGGCCTCGTCGACCAGGACTACGTCGACAACCACACGATCGGCTTCGCCGACCTGAAGGAGCGGGCGGC CCCGCGCACGCCGGAATGGGCCGCGGAGATCACCGGCGTCCCCGCCGAGGATATCCGCAAGCTCGCCTACGAGATGGCGA CCGAGCAGCCGGTGGGCATCCGGATGGGCGTGGCGCTGGAGCGGCACTACGGCGGCGGCCAGACCATCCGGGCGGTGACC TGCATCCCGGCGCTCACCGGCGCGTGGCGCCACGTCGGCGGCGGCGTCACCCAGTTCCCGGTCTGGGAGCATCCCTACAA GTTCGACGTGATGTGCCGGCCCGACCTGATCCCGGAAGGGACCCGGGTCGTCTCGAACCTCCAGATCGGCCGGGCGCTGA CCGGCGAGCTGAAGCTCGACCCGCCGATCATGTCGATGATGTGCTGGAACTCGAACCCGGTCACGCAGGCGCCCGAGACC GACAAGATCGTCGAGGGCCTGATGCGCGAGGACCTGTTCATGGTCTCGGCCGAGCACTTCATCTCCGACACGGCCGCCTA CGCCGACATCCTCCTGCCGGCCGCGATGGGCGCCGAGATGGAGGACATGATCCTGTCCTGGGGCCACCTCTACCTGACCT ACAACACCAAGTGCGCGGAGGCGCCCGGCGAGGCGATCCCCAACAACGAGATCTTCCGCCGCCTCGCCGCCCGGCTCGGC TTCGAGGAGGAGAACTTTAAGTGGACCGACGCGGAGTGCCTGGAGCACTACGTCGACTGGTCGTCGCCGGCCTGCGCGGG CATCGACCTCCAGTACATGCGCGCGCACGGTTTCGCCCGGCTCAAGGTCGGCACGCCGGACGACCGCGCTCCGCACCGCG ACGGCAACTTCCCGACCGATACCGGCAAGTGCATGCTCAAGATCGAGGGCGCCACGAACTTCGTCGCGCCGCCGTTCCGG CAGATGTACGAGGGCTTCCAGCCGGGCGAGCCCCTCGACCCGCTGCCCGATTACGTCGGCGCGCGGGAATCGCACGCGAA CGATCCCGAGCTGGCCAAGCGCTACCCGCTCAACATCGTCTCGCCCAAGAGCCACTACTTCCTGAATTCCTGCTACGCCA ACATGGAGGACAAGCAGAAGGGTCAGGGCGAGCAGTTCGTGATGATCAGCCCGGCCGACGCGTTGGCCCGCGGCATCGTC GACGGCGACCGCGTCCAGGTCGCCAACGCCCGCGGCGCCTTCAAGGGCGTCGCGCGCGTGACCGACGACGTCACGCACGG CGTCGTGGTGGCGACGCTGGGCTACTGGCGCCAGCTCAACGAGGGGACGGTGAACAGCATCTCGTCGGCGGCCTTCACCG ACATGGGCCACGCGCCGTCGTTCTCCGACAACCTCGTCGAGGTCTCGCGGGCGAACTGA
Upstream 100 bases:
>100_bases TCGAATTAGAACTTTTCTTCCTCTCGTTGTACGCTTCTCCCGCCGGGAGCCGGGACGCCTGAACAATAACGGGACGCCTG CGGCCGATGAGGGAGAGAGC
Downstream 100 bases:
>100_bases TCGGCGCGGCGCGGCGACCCGCTCCCGGTCGCCGCGCTCGCACGGTCGCCCGGTCAGCCGGCGGCGCTGTCGGCGCTCCG CCGCCGGCGGGGCCGCGCCG
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MNEIVQPEAYSEVFYGACPHDCPDTCSMLFEVKGGELLSVRGNPDHPMTRGGLCVKLKDYEKRHYHPDRVLYPMKRVGPK GSKQFERITWDEALDTIVDRWTAIIDRYGPQAIAPYSYLGNQGLVHGLNGGDAFFNRLGATVTERTFCGEGSCTAWLLTV GPTAGLDPESYIHSKYIVIWACNSVSTNLHHWAIVKDAQKKGAKVVVIDAYASRTAKAADWHIAPRPGTDGALAMALINS IIAQGLVDQDYVDNHTIGFADLKERAAPRTPEWAAEITGVPAEDIRKLAYEMATEQPVGIRMGVALERHYGGGQTIRAVT CIPALTGAWRHVGGGVTQFPVWEHPYKFDVMCRPDLIPEGTRVVSNLQIGRALTGELKLDPPIMSMMCWNSNPVTQAPET DKIVEGLMREDLFMVSAEHFISDTAAYADILLPAAMGAEMEDMILSWGHLYLTYNTKCAEAPGEAIPNNEIFRRLAARLG FEEENFKWTDAECLEHYVDWSSPACAGIDLQYMRAHGFARLKVGTPDDRAPHRDGNFPTDTGKCMLKIEGATNFVAPPFR QMYEGFQPGEPLDPLPDYVGARESHANDPELAKRYPLNIVSPKSHYFLNSCYANMEDKQKGQGEQFVMISPADALARGIV DGDRVQVANARGAFKGVARVTDDVTHGVVVATLGYWRQLNEGTVNSISSAAFTDMGHAPSFSDNLVEVSRAN
Sequences:
>Translated_712_residues MNEIVQPEAYSEVFYGACPHDCPDTCSMLFEVKGGELLSVRGNPDHPMTRGGLCVKLKDYEKRHYHPDRVLYPMKRVGPK GSKQFERITWDEALDTIVDRWTAIIDRYGPQAIAPYSYLGNQGLVHGLNGGDAFFNRLGATVTERTFCGEGSCTAWLLTV GPTAGLDPESYIHSKYIVIWACNSVSTNLHHWAIVKDAQKKGAKVVVIDAYASRTAKAADWHIAPRPGTDGALAMALINS IIAQGLVDQDYVDNHTIGFADLKERAAPRTPEWAAEITGVPAEDIRKLAYEMATEQPVGIRMGVALERHYGGGQTIRAVT CIPALTGAWRHVGGGVTQFPVWEHPYKFDVMCRPDLIPEGTRVVSNLQIGRALTGELKLDPPIMSMMCWNSNPVTQAPET DKIVEGLMREDLFMVSAEHFISDTAAYADILLPAAMGAEMEDMILSWGHLYLTYNTKCAEAPGEAIPNNEIFRRLAARLG FEEENFKWTDAECLEHYVDWSSPACAGIDLQYMRAHGFARLKVGTPDDRAPHRDGNFPTDTGKCMLKIEGATNFVAPPFR QMYEGFQPGEPLDPLPDYVGARESHANDPELAKRYPLNIVSPKSHYFLNSCYANMEDKQKGQGEQFVMISPADALARGIV DGDRVQVANARGAFKGVARVTDDVTHGVVVATLGYWRQLNEGTVNSISSAAFTDMGHAPSFSDNLVEVSRAN >Mature_712_residues MNEIVQPEAYSEVFYGACPHDCPDTCSMLFEVKGGELLSVRGNPDHPMTRGGLCVKLKDYEKRHYHPDRVLYPMKRVGPK GSKQFERITWDEALDTIVDRWTAIIDRYGPQAIAPYSYLGNQGLVHGLNGGDAFFNRLGATVTERTFCGEGSCTAWLLTV GPTAGLDPESYIHSKYIVIWACNSVSTNLHHWAIVKDAQKKGAKVVVIDAYASRTAKAADWHIAPRPGTDGALAMALINS IIAQGLVDQDYVDNHTIGFADLKERAAPRTPEWAAEITGVPAEDIRKLAYEMATEQPVGIRMGVALERHYGGGQTIRAVT CIPALTGAWRHVGGGVTQFPVWEHPYKFDVMCRPDLIPEGTRVVSNLQIGRALTGELKLDPPIMSMMCWNSNPVTQAPET DKIVEGLMREDLFMVSAEHFISDTAAYADILLPAAMGAEMEDMILSWGHLYLTYNTKCAEAPGEAIPNNEIFRRLAARLG FEEENFKWTDAECLEHYVDWSSPACAGIDLQYMRAHGFARLKVGTPDDRAPHRDGNFPTDTGKCMLKIEGATNFVAPPFR QMYEGFQPGEPLDPLPDYVGARESHANDPELAKRYPLNIVSPKSHYFLNSCYANMEDKQKGQGEQFVMISPADALARGIV DGDRVQVANARGAFKGVARVTDDVTHGVVVATLGYWRQLNEGTVNSISSAAFTDMGHAPSFSDNLVEVSRAN
Specific function: Terminal Reductase During Anaerobic Growth On Various Sulfoxide And N-Oxide Compounds (By Similarity). [C]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787870, Length=787, Percent_Identity=28.7166454891995, Blast_Score=235, Evalue=6e-63, Organism=Escherichia coli, GI171474008, Length=776, Percent_Identity=28.3505154639175, Blast_Score=232, Evalue=8e-62, Organism=Escherichia coli, GI87081797, Length=781, Percent_Identity=27.6568501920615, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI145693196, Length=739, Percent_Identity=23.680649526387, Blast_Score=122, Evalue=1e-28, Organism=Escherichia coli, GI3868721, Length=732, Percent_Identity=23.9071038251366, Blast_Score=115, Evalue=7e-27, Organism=Escherichia coli, GI87081994, Length=752, Percent_Identity=22.0744680851064, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1787231, Length=490, Percent_Identity=23.8775510204082, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1788534, Length=740, Percent_Identity=21.7567567567568, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1787741, Length=294, Percent_Identity=24.1496598639456, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 78478; Mature: 78478
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEIVQPEAYSEVFYGACPHDCPDTCSMLFEVKGGELLSVRGNPDHPMTRGGLCVKLKDY CCCCCCCHHHHHHHCCCCCCCCHHHHHHHEEECCCEEEEECCCCCCCCCCCCEEEEEECC EKRHYHPDRVLYPMKRVGPKGSKQFERITWDEALDTIVDRWTAIIDRYGPQAIAPYSYLG HHHCCCCCHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC NQGLVHGLNGGDAFFNRLGATVTERTFCGEGSCTAWLLTVGPTAGLDPESYIHSKYIVIW CCCCEEECCCHHHHHHHHCCHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHCCCEEEEE ACNSVSTNLHHWAIVKDAQKKGAKVVVIDAYASRTAKAADWHIAPRPGTDGALAMALINS EECCCCCCCEEEEEEEHHHHCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHH IIAQGLVDQDYVDNHTIGFADLKERAAPRTPEWAAEITGVPAEDIRKLAYEMATEQPVGI HHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCE RMGVALERHYGGGQTIRAVTCIPALTGAWRHVGGGVTQFPVWEHPYKFDVMCRPDLIPEG EEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC TRVVSNLQIGRALTGELKLDPPIMSMMCWNSNPVTQAPETDKIVEGLMREDLFMVSAEHF HHHHHHHHHCCEEECCEEECCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ISDTAAYADILLPAAMGAEMEDMILSWGHLYLTYNTKCAEAPGEAIPNNEIFRRLAARLG HHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC FEEENFKWTDAECLEHYVDWSSPACAGIDLQYMRAHGFARLKVGTPDDRAPHRDGNFPTD CCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCC TGKCMLKIEGATNFVAPPFRQMYEGFQPGEPLDPLPDYVGARESHANDPELAKRYPLNIV CCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCEEE SPKSHYFLNSCYANMEDKQKGQGEQFVMISPADALARGIVDGDRVQVANARGAFKGVARV CCCHHHHHHHHHCCCCHHHCCCCCEEEEECCHHHHHHHCCCCCEEEEECCCCHHHHHHHH TDDVTHGVVVATLGYWRQLNEGTVNSISSAAFTDMGHAPSFSDNLVEVSRAN HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MNEIVQPEAYSEVFYGACPHDCPDTCSMLFEVKGGELLSVRGNPDHPMTRGGLCVKLKDY CCCCCCCHHHHHHHCCCCCCCCHHHHHHHEEECCCEEEEECCCCCCCCCCCCEEEEEECC EKRHYHPDRVLYPMKRVGPKGSKQFERITWDEALDTIVDRWTAIIDRYGPQAIAPYSYLG HHHCCCCCHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC NQGLVHGLNGGDAFFNRLGATVTERTFCGEGSCTAWLLTVGPTAGLDPESYIHSKYIVIW CCCCEEECCCHHHHHHHHCCHHHHHEECCCCCCEEEEEEECCCCCCCHHHHHCCCEEEEE ACNSVSTNLHHWAIVKDAQKKGAKVVVIDAYASRTAKAADWHIAPRPGTDGALAMALINS EECCCCCCCEEEEEEEHHHHCCCEEEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHH IIAQGLVDQDYVDNHTIGFADLKERAAPRTPEWAAEITGVPAEDIRKLAYEMATEQPVGI HHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCE RMGVALERHYGGGQTIRAVTCIPALTGAWRHVGGGVTQFPVWEHPYKFDVMCRPDLIPEG EEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCC TRVVSNLQIGRALTGELKLDPPIMSMMCWNSNPVTQAPETDKIVEGLMREDLFMVSAEHF HHHHHHHHHCCEEECCEEECCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ISDTAAYADILLPAAMGAEMEDMILSWGHLYLTYNTKCAEAPGEAIPNNEIFRRLAARLG HHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC FEEENFKWTDAECLEHYVDWSSPACAGIDLQYMRAHGFARLKVGTPDDRAPHRDGNFPTD CCCCCCEECCHHHHHHHHCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCCCCC TGKCMLKIEGATNFVAPPFRQMYEGFQPGEPLDPLPDYVGARESHANDPELAKRYPLNIV CCCEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCEEE SPKSHYFLNSCYANMEDKQKGQGEQFVMISPADALARGIVDGDRVQVANARGAFKGVARV CCCHHHHHHHHHCCCCHHHCCCCCEEEEECCHHHHHHHCCCCCEEEEECCCCHHHHHHHH TDDVTHGVVVATLGYWRQLNEGTVNSISSAAFTDMGHAPSFSDNLVEVSRAN HHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]