Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170750206

Identifier: 170750206

GI number: 170750206

Start: 4050091

End: 4052034

Strand: Direct

Name: 170750206

Synonym: Mrad2831_3808

Alternate gene names: NA

Gene position: 4050091-4052034 (Clockwise)

Preceding gene: 170750204

Following gene: 170750207

Centisome position: 66.64

GC content: 74.85

Gene sequence:

>1944_bases
ATGTCCAGCGTTCCCCAGCCCGCCGAACTGACGCTGCGCGGCATCGTGCTGGGCGGCGCGATCACGCTGATCTTCACCGC
CGCCAACGTCTATCTCGGCCTCAAGGTCGGCCTGACCTTCGCCACCTCGATTCCCGCCGCCGTCATCTCCATGGCGATCC
TGCGGCGCCTGCCCGGCGCCACGGTCCTGGAGAACAACATCGTCCAGACCGTCGCTTCCGCGGCCGGCACCCTGTCGGCG
ATCATCTTCGTGCTGCCCGGTCTGGTGATGATCGGCTGGTGGCAGGGCTTTCCGTGGCTCACCACCGCGGGCATCACCGC
GACGGGCGGGATCCTCGGCGTGATGTTCTCCGTGCCCCTGCGCCGCGCCCTCGTGGTCGAGGCCGACCTGCCCTTTCCCG
AGGGCCGGGCCGCCGCCGAGGTGCTGGCGGTGGGCTCCGGCAGCCGTGCCGGGGAAGCCGACAGCGCCCGCGGCCTGCGG
CTCCTCGCGTGGAACGGCCTCGTCTCGGCGGCCTTCGCGGCGCTGGCCCAGACCCGGCTCGTCCTCGACAGCGCCGGCAC
GTGGTTCCGGGTCGGCGCGGGCGCCACCGGGATCGCCGGCAACCTGTCCTTCGCGCTGATCGGCGTCGGCCACCTCGTCG
GGCCCTCGGTCGGGGCCGCGATGGCCCTGGGGCTGGCGATCGCCTGGGGCGGCCTCATCCCGCTGCTGACCGCCGCGCAG
CCGATGCCGGGCGCCGGCCTGGAGGCCTGGGTCGGCGCGGTGTTCCGCCAGGACGTGCGCTTCTTCGGCGCCGGCGTGAT
GGGCGTCGCGGCGGTCTGGACCCTGGTTCGGATCGCCGCTCCGGTACTCGGCGGCATCCGCTCGGCGCTGGCGGCCGGGC
GCGCCCGCGCGGCCGGCGCGGCGCTCGCCGTCGCGGAGCGCGACCTGCCGGTCGCCGCAGTGGTGGTGGTCTCCCTGGCC
CTGCTCGCGCCGATCGGCTGGCTGCTGTGGACCGTGCTGGCCGGGACGCCGCTGGAAGGCGAGGCCCTCCCGCTGATCGC
CGGCGCCCTGCTGTTCATCCTCGTGATCGGCCTCTGCGTCGCCGCCGTGACCGGCTACATGGCCGGGCTGATCGGCGCCT
CGAACTCTCCCCTGTCGGGCGTCGGAATCCTCGCCGTGCTGGCGAGCGCGGCCCTTCTCCTGGGGCTGTTCGGCCGCGGG
ACCGATCCGGAGGGCACCCGGGCGCTGGTCGCCTACGCCCTGGCGGTCACCGGGATCGTGTTCGGCGTCGCCACCATCGC
CAACGACAACCTGCAGGATCTCAAGACCGGGCAGCTCGTCGGCGCGACGCCCTGGAAGCAGCAGGTCGCCCTGGTCATCG
GCGTGGCCTTCGGCTCCGTCATCATCCCGCCGGTGCTGAACCTCCTCGGCACCAGCTTCGGCTTCGCGGGCGCGCCCGGG
GCGGGCCCGAACGCCCTCGCGGCACCGCAGGCCGGGCTGATCTCGGCGCTTGCCCGGGGCGTCCTGACCGGCGATGCCAA
CTGGCGGATGCTGGCCTGGGGCGCCGTCGCCGGCCTCGGCCTCGTCGGCCTGGACGCGGCTCTCGGGCGCCTGAATGTCC
TGCGCCTGCCGCCGCTGGCCGTCGCCCTCGGGATCTACCTGCCGATGAAGCTGGTCCTGCCGCTGGTGGCGGGCGCCGCG
ATCGGCACGTTCTACGACCGCTGGGCCCGGGGGCGGCCCGATCCGGAGCTGGCCCTGCGCATGGGCACGCTCACCGCGAC
CGGCCTGATCGTCGGCGAGAGCCTGTGGGGCGTCACCTTCGCGCTGATCGTCTACCTGTCGGGCAGCGACGCGCCCCTGG
CGCTGCCCGGCTCGGAGGCGCAGGGCGCCGCGCTGCTCGCCGGCCTCGCGCTGTTCGCCGGCGCGACGGCGGCCCTGTAC
CGGACCGCGCGGCGCTCGGCCTGA

Upstream 100 bases:

>100_bases
GCGCGGTTTCGGATACCGGCGGCTGATCGTGGTGCGGCGGCTGTCTTTTCTCCGGTCCTGTTCCTAGACTGGTCCGGTCC
CGCAACCGGGTCCGGTCCGC

Downstream 100 bases:

>100_bases
CCGGGCCGCAACCCGGCCCTGCATTGACTTCGCAGCCGCACACACGCATATCGGCGGCGCAGCGTCAGCGGCCGTCATGG
CCCGCTTGAGGGGGCTGCGT

Product: OPT family oligopeptide transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 646

Protein sequence:

>647_residues
MSSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGATVLENNIVQTVASAAGTLSA
IIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPLRRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLR
LLAWNGLVSAAFAALAQTRLVLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ
PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGAALAVAERDLPVAAVVVVSLA
LLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCVAAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRG
TDPEGTRALVAYALAVTGIVFGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG
AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLAVALGIYLPMKLVLPLVAGAA
IGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTFALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALY
RTARRSA

Sequences:

>Translated_647_residues
MSSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGATVLENNIVQTVASAAGTLSA
IIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPLRRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLR
LLAWNGLVSAAFAALAQTRLVLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ
PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGAALAVAERDLPVAAVVVVSLA
LLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCVAAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRG
TDPEGTRALVAYALAVTGIVFGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG
AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLAVALGIYLPMKLVLPLVAGAA
IGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTFALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALY
RTARRSA
>Mature_646_residues
SSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGATVLENNIVQTVASAAGTLSAI
IFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPLRRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLRL
LAWNGLVSAAFAALAQTRLVLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQP
MPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGAALAVAERDLPVAAVVVVSLAL
LAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCVAAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRGT
DPEGTRALVAYALAVTGIVFGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPGA
GPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLAVALGIYLPMKLVLPLVAGAAI
GTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTFALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALYR
TARRSA

Specific function: Unknown

COG id: COG1297

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oligopeptide OPT transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004814
- InterPro:   IPR004813 [H]

Pfam domain/function: PF03169 OPT [H]

EC number: NA

Molecular weight: Translated: 64800; Mature: 64669

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGA
CCCCCCCHHHEEEHEEHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHCCCC
TVLENNIVQTVASAAGTLSAIIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHH
RRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLRLLAWNGLVSAAFAALAQTRL
HHEEEEEECCCCCCCCHHHHHEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
VLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ
HHCCCCCEEEECCCCCCCCCCCHHHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGA
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH
ALAVAERDLPVAAVVVVSLALLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCV
HHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRGTDPEGTRALVAYALAVTGIV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG
HHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLA
CCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHH
VALGIYLPMKLVLPLVAGAAIGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALYRTARRSA
HHHHEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSVPQPAELTLRGIVLGGAITLIFTAANVYLGLKVGLTFATSIPAAVISMAILRRLPGA
CCCCCCHHHEEEHEEHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHCCCC
TVLENNIVQTVASAAGTLSAIIFVLPGLVMIGWWQGFPWLTTAGITATGGILGVMFSVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHH
RRALVVEADLPFPEGRAAAEVLAVGSGSRAGEADSARGLRLLAWNGLVSAAFAALAQTRL
HHEEEEEECCCCCCCCHHHHHEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
VLDSAGTWFRVGAGATGIAGNLSFALIGVGHLVGPSVGAAMALGLAIAWGGLIPLLTAAQ
HHCCCCCEEEECCCCCCCCCCCHHHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
PMPGAGLEAWVGAVFRQDVRFFGAGVMGVAAVWTLVRIAAPVLGGIRSALAAGRARAAGA
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCH
ALAVAERDLPVAAVVVVSLALLAPIGWLLWTVLAGTPLEGEALPLIAGALLFILVIGLCV
HHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
AAVTGYMAGLIGASNSPLSGVGILAVLASAALLLGLFGRGTDPEGTRALVAYALAVTGIV
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
FGVATIANDNLQDLKTGQLVGATPWKQQVALVIGVAFGSVIIPPVLNLLGTSFGFAGAPG
HHHHHHCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AGPNALAAPQAGLISALARGVLTGDANWRMLAWGAVAGLGLVGLDAALGRLNVLRLPPLA
CCCCCCCCCCHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCHHH
VALGIYLPMKLVLPLVAGAAIGTFYDRWARGRPDPELALRMGTLTATGLIVGESLWGVTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIVYLSGSDAPLALPGSEAQGAALLAGLALFAGATAALYRTARRSA
HHHHEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]