| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750194
Identifier: 170750194
GI number: 170750194
Start: 4038143
End: 4039120
Strand: Direct
Name: 170750194
Synonym: Mrad2831_3796
Alternate gene names: NA
Gene position: 4038143-4039120 (Clockwise)
Preceding gene: 170750193
Following gene: 170750196
Centisome position: 66.44
GC content: 68.2
Gene sequence:
>978_bases ATGATCGACGCCATCGCCGAGAAGCTGTTCGATCCGCGCTTCATGGGCACGGTCCTGGCCGCCGTCGCGGCGGCCGCGAC CGCCTACGCGGTGGCGCAGCCCTTCCTGGAGACCGACCGGCTCGGCAAGCGGATGAAGCTCGTCAGCGACGAGCGAGAGC AGATCCGGCGGCGCGAGCGGCTGAGCGCGGAGCGGACCGGCAACCGGGCGACGCTGCGCACGGAGCCGAAGGCCTACATG AAGTCCATCGTCGAGCGGTACCAGCTGCGCCGCTGGCTCGGCACGGACACCGCCAAGCGCAAGCTGATGCAGGCGGGCTA TCGCGGCCAGGGGGCGGAGACGGCGTTCCTGTTCTTCCGCCTCGTCGTGCCGGTGGTCGCGGTGATCGCGGCCCTGTTCT ACCTGTTCGTGCTGGAGGTGCTCGACGCCTCGTACCTCATGCGGTTCGGGCTGGTGATCGGCGCGGCCTACATGGGCATC AAGGCGCCGGAGCTGTTCCTGGTGAACACCGCCAAGAAGCGCCAGACCGAGATCCGCAAGGCGTGGCCCGACGCCCTCGA CCTCACGCTGATCTGCGTGGAATCCGGCATGGCGATCGAGAACGCGTTCCGGAAGGTGAGCACCGAGATCGCCACGTCCT CGGTCGTGCTGGCCGAGGAACTCGCGCTGATGACCGCCGAGATGTCGTTCCTGCCCGACCGGCGCCAGGCCTACGAGAAC CTCGTGATGCGCACCGGGCTCGAGCCGGTGAAATCCGTGGCCACGGCGCTGATCCAGGCCGAGCGCTACGGCACGCCGGT GGGTCAGGCGCTGCGCGTGCTGAGCCAGGAGAGCCGCGACATGCGCATGAACGAGGCCGAGAAGAAGGCGGCCGGGCTTC CGCCGAAGCTCACCGTCCCGATGATCCTGTTCTTCCTGCCCGTGCTGTTCGTGGTCATCATCACCCCGGCGGTCATCCAG ATCATGCGGACGCAGTGA
Upstream 100 bases:
>100_bases GTCGGCGCGGCGATCTGGATGTCCATCGGCATCTTCACGATCAAGAAGATGATCGCCTTCGAGTTCTAGGCGCGGTGCGC CGTCTTCCGGATCCCGCCCG
Downstream 100 bases:
>100_bases CGGCCGGGATGGTCCAGGGCATACGCCAGGGGATACGGCAGGACCGGCCTCAGCGGATGCGGCCGGGGCGGGTCGGCTCG AACACGATGCGGCGGTGATA
Product: type II secretion system protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Integral Membrane Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Bacterial Type II Secretion System Protein; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MIDAIAEKLFDPRFMGTVLAAVAAAATAYAVAQPFLETDRLGKRMKLVSDEREQIRRRERLSAERTGNRATLRTEPKAYM KSIVERYQLRRWLGTDTAKRKLMQAGYRGQGAETAFLFFRLVVPVVAVIAALFYLFVLEVLDASYLMRFGLVIGAAYMGI KAPELFLVNTAKKRQTEIRKAWPDALDLTLICVESGMAIENAFRKVSTEIATSSVVLAEELALMTAEMSFLPDRRQAYEN LVMRTGLEPVKSVATALIQAERYGTPVGQALRVLSQESRDMRMNEAEKKAAGLPPKLTVPMILFFLPVLFVVIITPAVIQ IMRTQ
Sequences:
>Translated_325_residues MIDAIAEKLFDPRFMGTVLAAVAAAATAYAVAQPFLETDRLGKRMKLVSDEREQIRRRERLSAERTGNRATLRTEPKAYM KSIVERYQLRRWLGTDTAKRKLMQAGYRGQGAETAFLFFRLVVPVVAVIAALFYLFVLEVLDASYLMRFGLVIGAAYMGI KAPELFLVNTAKKRQTEIRKAWPDALDLTLICVESGMAIENAFRKVSTEIATSSVVLAEELALMTAEMSFLPDRRQAYEN LVMRTGLEPVKSVATALIQAERYGTPVGQALRVLSQESRDMRMNEAEKKAAGLPPKLTVPMILFFLPVLFVVIITPAVIQ IMRTQ >Mature_325_residues MIDAIAEKLFDPRFMGTVLAAVAAAATAYAVAQPFLETDRLGKRMKLVSDEREQIRRRERLSAERTGNRATLRTEPKAYM KSIVERYQLRRWLGTDTAKRKLMQAGYRGQGAETAFLFFRLVVPVVAVIAALFYLFVLEVLDASYLMRFGLVIGAAYMGI KAPELFLVNTAKKRQTEIRKAWPDALDLTLICVESGMAIENAFRKVSTEIATSSVVLAEELALMTAEMSFLPDRRQAYEN LVMRTGLEPVKSVATALIQAERYGTPVGQALRVLSQESRDMRMNEAEKKAAGLPPKLTVPMILFFLPVLFVVIITPAVIQ IMRTQ
Specific function: Unknown
COG id: COG2064
COG function: function code NU; Flp pilus assembly protein TadC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36402; Mature: 36402
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAIAEKLFDPRFMGTVLAAVAAAATAYAVAQPFLETDRLGKRMKLVSDEREQIRRRER CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSAERTGNRATLRTEPKAYMKSIVERYQLRRWLGTDTAKRKLMQAGYRGQGAETAFLFFR HHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHH LVVPVVAVIAALFYLFVLEVLDASYLMRFGLVIGAAYMGIKAPELFLVNTAKKRQTEIRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHH AWPDALDLTLICVESGMAIENAFRKVSTEIATSSVVLAEELALMTAEMSFLPDRRQAYEN HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVMRTGLEPVKSVATALIQAERYGTPVGQALRVLSQESRDMRMNEAEKKAAGLPPKLTVP HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MILFFLPVLFVVIITPAVIQIMRTQ HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDAIAEKLFDPRFMGTVLAAVAAAATAYAVAQPFLETDRLGKRMKLVSDEREQIRRRER CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSAERTGNRATLRTEPKAYMKSIVERYQLRRWLGTDTAKRKLMQAGYRGQGAETAFLFFR HHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHH LVVPVVAVIAALFYLFVLEVLDASYLMRFGLVIGAAYMGIKAPELFLVNTAKKRQTEIRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHH AWPDALDLTLICVESGMAIENAFRKVSTEIATSSVVLAEELALMTAEMSFLPDRRQAYEN HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVMRTGLEPVKSVATALIQAERYGTPVGQALRVLSQESRDMRMNEAEKKAAGLPPKLTVP HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MILFFLPVLFVVIITPAVIQIMRTQ HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA