| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750193
Identifier: 170750193
GI number: 170750193
Start: 4037134
End: 4038111
Strand: Direct
Name: 170750193
Synonym: Mrad2831_3795
Alternate gene names: NA
Gene position: 4037134-4038111 (Clockwise)
Preceding gene: 170750192
Following gene: 170750194
Centisome position: 66.42
GC content: 68.81
Gene sequence:
>978_bases ATGGCGGACGCCTCCAACCTGCCGATCGCCGCCGGCCTCGTCGGCATCGCGGTCGCCGCAGTCGCCTACGTGGCGGTCCT GCCCCTGCTCGGCGGCGAGCGCCGGGCCAACAAGCGCCTGAAGTCGATCAGCGTCTCGGCCTCGGGAGCGGCGACCCGGG GCGTGGCGGTCAACCGACGCGAGCAGGTCGCCAAGACGCTGAGCGAGATCGAGGCGAAGGCCAAGGGCGCCTCGAAGGCC AGCGTCGAGCTGAAGCTCGCCCGCGCGGGCCTCGGATGGACGAAGCAGACCTTCTACGGGATGTCGGCCCTGAGCGGCGT CGTCTTCGGCCTCCTGCTCTTCGTCATCACCGACAACGCCCTGGCGGCGCTCGGCGCCGCCTTCGCGGGCGGCTTCGGCC TCCCGGCCTATCTGCTGCGCCACCTGCGGCTCAAGCGCATCGCGAAATTCAACAAGGAGCTGCCCAACGCCGTCGACGTG GTGGTCCGCGGTATCCGCACCGGCATCCCGGTGGGCGACTGCTTCCGCATGGTCTCGCGCGAGGCCGAGGAGCCGGTGCG CAGCGAGTTCCGGACCGTGGTCGAGACCCAGGCGATGGGCCTGTCCCTCGGCGAGGCCTGCACCCGCCTGTTCGAGCGGG TGCCCACCGCCGAGGTGAACTTCTTCGCCATCGTGATCAACATCCAGCAGCAATCGGGCGGCAACCTCTCCGAGGCGCTG AACAACCTGTCCACGGTGCTGCGCGACCGCGCCAAGATGCGCGGCAAGGTCCAGGCGATGAGCATGGAGGCCAAGGCCTC GGCCTCGATCATCGCCTGCCTGCCCTTCGCGGTGGCGGGCATCACCGCCCTCACCAGCCCCGACTACATCTCGCTGCTCT GGACCACCGATACGGGCAAGATCGCCCTGGTCGGCGCGGCGATCTGGATGTCCATCGGCATCTTCACGATCAAGAAGATG ATCGCCTTCGAGTTCTAG
Upstream 100 bases:
>100_bases GGCCGGCCGAAATTCTGGGAGCGCGCCCGCTACTACGGCCTGGAACAGCGACTCGGCGAGGCGCTCGACGCTGCCGAGGT CATCGACCGGAACTGAGCCG
Downstream 100 bases:
>100_bases GCGCGGTGCGCCGTCTTCCGGATCCCGCCCGATGATCGACGCCATCGCCGAGAAGCTGTTCGATCCGCGCTTCATGGGCA CGGTCCTGGCCGCCGTCGCG
Product: type II secretion system protein
Products: NA
Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System Protein F; Type II Secretion System F Domain; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System; Flp Type Pilus Assembly Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherence Protein B; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; Integral Membrane Protein; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MADASNLPIAAGLVGIAVAAVAYVAVLPLLGGERRANKRLKSISVSASGAATRGVAVNRREQVAKTLSEIEAKAKGASKA SVELKLARAGLGWTKQTFYGMSALSGVVFGLLLFVITDNALAALGAAFAGGFGLPAYLLRHLRLKRIAKFNKELPNAVDV VVRGIRTGIPVGDCFRMVSREAEEPVRSEFRTVVETQAMGLSLGEACTRLFERVPTAEVNFFAIVINIQQQSGGNLSEAL NNLSTVLRDRAKMRGKVQAMSMEAKASASIIACLPFAVAGITALTSPDYISLLWTTDTGKIALVGAAIWMSIGIFTIKKM IAFEF
Sequences:
>Translated_325_residues MADASNLPIAAGLVGIAVAAVAYVAVLPLLGGERRANKRLKSISVSASGAATRGVAVNRREQVAKTLSEIEAKAKGASKA SVELKLARAGLGWTKQTFYGMSALSGVVFGLLLFVITDNALAALGAAFAGGFGLPAYLLRHLRLKRIAKFNKELPNAVDV VVRGIRTGIPVGDCFRMVSREAEEPVRSEFRTVVETQAMGLSLGEACTRLFERVPTAEVNFFAIVINIQQQSGGNLSEAL NNLSTVLRDRAKMRGKVQAMSMEAKASASIIACLPFAVAGITALTSPDYISLLWTTDTGKIALVGAAIWMSIGIFTIKKM IAFEF >Mature_324_residues ADASNLPIAAGLVGIAVAAVAYVAVLPLLGGERRANKRLKSISVSASGAATRGVAVNRREQVAKTLSEIEAKAKGASKAS VELKLARAGLGWTKQTFYGMSALSGVVFGLLLFVITDNALAALGAAFAGGFGLPAYLLRHLRLKRIAKFNKELPNAVDVV VRGIRTGIPVGDCFRMVSREAEEPVRSEFRTVVETQAMGLSLGEACTRLFERVPTAEVNFFAIVINIQQQSGGNLSEALN NLSTVLRDRAKMRGKVQAMSMEAKASASIIACLPFAVAGITALTSPDYISLLWTTDTGKIALVGAAIWMSIGIFTIKKMI AFEF
Specific function: Unknown
COG id: COG4965
COG function: function code U; Flp pilus assembly protein TadB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34435; Mature: 34304
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADASNLPIAAGLVGIAVAAVAYVAVLPLLGGERRANKRLKSISVSASGAATRGVAVNRR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHH EQVAKTLSEIEAKAKGASKASVELKLARAGLGWTKQTFYGMSALSGVVFGLLLFVITDNA HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH LAALGAAFAGGFGLPAYLLRHLRLKRIAKFNKELPNAVDVVVRGIRTGIPVGDCFRMVSR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH EAEEPVRSEFRTVVETQAMGLSLGEACTRLFERVPTAEVNFFAIVINIQQQSGGNLSEAL HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHH NNLSTVLRDRAKMRGKVQAMSMEAKASASIIACLPFAVAGITALTSPDYISLLWTTDTGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC IALVGAAIWMSIGIFTIKKMIAFEF EEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADASNLPIAAGLVGIAVAAVAYVAVLPLLGGERRANKRLKSISVSASGAATRGVAVNRR CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHH EQVAKTLSEIEAKAKGASKASVELKLARAGLGWTKQTFYGMSALSGVVFGLLLFVITDNA HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHH LAALGAAFAGGFGLPAYLLRHLRLKRIAKFNKELPNAVDVVVRGIRTGIPVGDCFRMVSR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH EAEEPVRSEFRTVVETQAMGLSLGEACTRLFERVPTAEVNFFAIVINIQQQSGGNLSEAL HHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHH NNLSTVLRDRAKMRGKVQAMSMEAKASASIIACLPFAVAGITALTSPDYISLLWTTDTGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC IALVGAAIWMSIGIFTIKKMIAFEF EEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA