| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750187
Identifier: 170750187
GI number: 170750187
Start: 4029577
End: 4030806
Strand: Reverse
Name: 170750187
Synonym: Mrad2831_3789
Alternate gene names: NA
Gene position: 4030806-4029577 (Counterclockwise)
Preceding gene: 170750195
Following gene: 170750186
Centisome position: 66.32
GC content: 68.94
Gene sequence:
>1230_bases ATGATCAGGACAATCGGCGGCGCGGTGCTGGCGACCGCCCTCGCGGGGACCGCGCTCGGCTCCGCCCCGGCGGCCGCGCA GGGAAGCTTCTCGGACAACGCGATACGGATCGGCATCCTCAACGACCAGTCCGGCCTCTACGCCGAGTACGGCGGCCAGG GCTCGGTCGAGGCCGCCCGCATGGCGGTGGAGGACATGGGCGGCAAGATCGGCAGCGTGCCGATCGAGATCCTCACGGCC GACCATCAGAACAAGCCCGACATCGCCTCGGCGATCGCCCGGCAATGGTACGACCGCGACGGGGTCGACGCGATCATGGA GCTGACCACCTCCTCGGTGGCGCTGGCGGTCCAGGGCCTGTCCAAGGAGAAGAAGAAGATCACCATCACCACCGGGGCGG CGACCAGCGACCTCACCGGCAAGGCCTGCACGCCGTACGGCTACCACTGGGCGTTCGACACGCGGGCGCTGGCGGTGGGC ACTGGCGGCGCGCTGACCCGGGCGGGCGGCAACACGTGGTTCTTCCTCACCGCCGACTACGCCTTCGGCTCGGCGCTGGA GGCCGACACCAGCAAGGTGGTGATCGCCAACGGCGGCAAGGTGCTGGGCAGCGTCCGGCACCCGCTCTCGAACCAGGACT TCTCGTCCTTCCTGCTCCAGGCGCAGGGCTCGAAGGCCAAGGTGATCGGGCTCGCCAATGCCGGCCTCGACACCTCGAAC GCGATCAAGCAGGCGGCCGAGTACGGCATCGTCGAGGGCGGGCAGAAGCTCGCGGCCCTGCTGTTCACCCTCTCGGAGGT GCACGGGCTCGGACTCAAGGTCGCCCAGGGCCTGACGCTCACCGAGGGCTGGTACTGGGACGCCAACGACGAGACCCGCG CCTTCGGCCAGCGCTACATGAAGCGCACCGGCCGGATGCCCAACATGATCCAGGCCGGCACCTACTCGGCGGTCCTGTCC TACCTGAAGGCCGTCAAGGCGGCCGGCACCGACGAGACCGACGCGGTCAACGCCAAGCTCAAGGAACTGCCGGTGGACGA CGTCTTCGCCCATGGCGGGATCGTGCAGCCGAACGGCCGCATGGTCCACGACATGTACCTGTTCGAGGTGAAGAAGCCGG CCGAGTCGAAGGGTCCGTGGGACCTCTACAAGCTGATCTCGACCATCCCCGGCAAGGAGGCCTTCGCCACCCCGGCCGAG AGCGGCTGCCCGCTGACGGCGGCGAAGTAG
Upstream 100 bases:
>100_bases GCCTCCGACCGACCTCGGCCGTGGCGCATCGCCGGGGCGTCCCCTATCCTGCCGGCGGAACCGCCTCAGAAGCGGGCGCT CGGGCGAACCGGGGGGAGAC
Downstream 100 bases:
>100_bases GGACGAGGGAGGGGCGCAGATGCCCCTCCGTCATCGCGAGCGCAGCGAGGCGACTGAGCGCTACGCGGCCTCGGAGAGCG TGGCGCTGCTCAGGCGTCTC
Product: Leu/Ile/Val-binding family protein
Products: NA
Alternate protein names: UreA/Short-Chain Amide ABC Transporter; ABC-Type Transporter Periplasmic Component; Branched-Chain Amino Acid ABC Transporter; ABC-Type Transporter Periplasmic; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter; Tat Pathway Signal Sequence Domain Protein; Amino Acid ABC Transporter Periplasmic Protein; Inner-Membrane Translocator; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MIRTIGGAVLATALAGTALGSAPAAAQGSFSDNAIRIGILNDQSGLYAEYGGQGSVEAARMAVEDMGGKIGSVPIEILTA DHQNKPDIASAIARQWYDRDGVDAIMELTTSSVALAVQGLSKEKKKITITTGAATSDLTGKACTPYGYHWAFDTRALAVG TGGALTRAGGNTWFFLTADYAFGSALEADTSKVVIANGGKVLGSVRHPLSNQDFSSFLLQAQGSKAKVIGLANAGLDTSN AIKQAAEYGIVEGGQKLAALLFTLSEVHGLGLKVAQGLTLTEGWYWDANDETRAFGQRYMKRTGRMPNMIQAGTYSAVLS YLKAVKAAGTDETDAVNAKLKELPVDDVFAHGGIVQPNGRMVHDMYLFEVKKPAESKGPWDLYKLISTIPGKEAFATPAE SGCPLTAAK
Sequences:
>Translated_409_residues MIRTIGGAVLATALAGTALGSAPAAAQGSFSDNAIRIGILNDQSGLYAEYGGQGSVEAARMAVEDMGGKIGSVPIEILTA DHQNKPDIASAIARQWYDRDGVDAIMELTTSSVALAVQGLSKEKKKITITTGAATSDLTGKACTPYGYHWAFDTRALAVG TGGALTRAGGNTWFFLTADYAFGSALEADTSKVVIANGGKVLGSVRHPLSNQDFSSFLLQAQGSKAKVIGLANAGLDTSN AIKQAAEYGIVEGGQKLAALLFTLSEVHGLGLKVAQGLTLTEGWYWDANDETRAFGQRYMKRTGRMPNMIQAGTYSAVLS YLKAVKAAGTDETDAVNAKLKELPVDDVFAHGGIVQPNGRMVHDMYLFEVKKPAESKGPWDLYKLISTIPGKEAFATPAE SGCPLTAAK >Mature_409_residues MIRTIGGAVLATALAGTALGSAPAAAQGSFSDNAIRIGILNDQSGLYAEYGGQGSVEAARMAVEDMGGKIGSVPIEILTA DHQNKPDIASAIARQWYDRDGVDAIMELTTSSVALAVQGLSKEKKKITITTGAATSDLTGKACTPYGYHWAFDTRALAVG TGGALTRAGGNTWFFLTADYAFGSALEADTSKVVIANGGKVLGSVRHPLSNQDFSSFLLQAQGSKAKVIGLANAGLDTSN AIKQAAEYGIVEGGQKLAALLFTLSEVHGLGLKVAQGLTLTEGWYWDANDETRAFGQRYMKRTGRMPNMIQAGTYSAVLS YLKAVKAAGTDETDAVNAKLKELPVDDVFAHGGIVQPNGRMVHDMYLFEVKKPAESKGPWDLYKLISTIPGKEAFATPAE SGCPLTAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42863; Mature: 42863
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTIGGAVLATALAGTALGSAPAAAQGSFSDNAIRIGILNDQSGLYAEYGGQGSVEAAR CCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHH MAVEDMGGKIGSVPIEILTADHQNKPDIASAIARQWYDRDGVDAIMELTTSSVALAVQGL HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC SKEKKKITITTGAATSDLTGKACTPYGYHWAFDTRALAVGTGGALTRAGGNTWFFLTADY CCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEECCCCEEEEEEECC AFGSALEADTSKVVIANGGKVLGSVRHPLSNQDFSSFLLQAQGSKAKVIGLANAGLDTSN CCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHH AIKQAAEYGIVEGGQKLAALLFTLSEVHGLGLKVAQGLTLTEGWYWDANDETRAFGQRYM HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCEEECCEEECCCCHHHHHHHHHH KRTGRMPNMIQAGTYSAVLSYLKAVKAAGTDETDAVNAKLKELPVDDVFAHGGIVQPNGR HHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCEECCCCC MVHDMYLFEVKKPAESKGPWDLYKLISTIPGKEAFATPAESGCPLTAAK EEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIRTIGGAVLATALAGTALGSAPAAAQGSFSDNAIRIGILNDQSGLYAEYGGQGSVEAAR CCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCHHHHH MAVEDMGGKIGSVPIEILTADHQNKPDIASAIARQWYDRDGVDAIMELTTSSVALAVQGL HHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC SKEKKKITITTGAATSDLTGKACTPYGYHWAFDTRALAVGTGGALTRAGGNTWFFLTADY CCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEEECCCCEEECCCCEEEEEEECC AFGSALEADTSKVVIANGGKVLGSVRHPLSNQDFSSFLLQAQGSKAKVIGLANAGLDTSN CCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHH AIKQAAEYGIVEGGQKLAALLFTLSEVHGLGLKVAQGLTLTEGWYWDANDETRAFGQRYM HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCEEECCEEECCCCHHHHHHHHHH KRTGRMPNMIQAGTYSAVLSYLKAVKAAGTDETDAVNAKLKELPVDDVFAHGGIVQPNGR HHHCCCCCHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHCCCEECCCCC MVHDMYLFEVKKPAESKGPWDLYKLISTIPGKEAFATPAESGCPLTAAK EEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA