| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750163
Identifier: 170750163
GI number: 170750163
Start: 4007513
End: 4008082
Strand: Direct
Name: 170750163
Synonym: Mrad2831_3765
Alternate gene names: NA
Gene position: 4007513-4008082 (Clockwise)
Preceding gene: 170750155
Following gene: 170750168
Centisome position: 65.94
GC content: 75.61
Gene sequence:
>570_bases ATGCGCACCGAGCCCGCCGTCACCCTGCACACCGTCTGCGGCCTGGAGGAGCTGGCCGGCCACGGCGCGCGCGGCGTGAG CCACGTCCTGTCGCTGCTCGATCCCGGCACGTCGGAGCCCGCGGCCTTCACCGCCTACGGCGCCCACGCCCGCACGACCC TCCGGTTCCACGACTGCCTCGGTCCGGGCGAGGGCCTCGTCCCGCCGGAACCGGAGCACGTCGCGGCGATCCTCGATTTC GGGCGGTCCCTCGATGGCGCCGGCCATCTCCTGGTCCACTGCCATTACGGCCTGTCGCGCTCCACCGCGGCGCTGCTGAC CCTGTTCGCGCAGGCCGAACCGGACGCGCCCGCCGCCGCCCTGGTGGAGCGCCTCCACGCCCTGCGCGAGCCGGCCTGGC CGAACGCGCGCATGATCGGCTTCGCCGACGCGATGCTGGAGCGGGACGGGGAACTCAGCGCGGCGGTGCGACGGCTGCAC GCCCTGCAGTTGCGGGTTCGCCCGCATCTCGCCGAGCTGCTGCGCGGGCTCGGCCGCGGCGCGGAGGTCGACGCCGCGCA GGCCCTGTGA
Upstream 100 bases:
>100_bases TCGCAGGTAGCACGTGCGTGCCGGTTCTCGAAAGCCGCGGGCGGCCGGGGCAGTTCCGTCGCGCCTCGAAACCGGCCCGC GCCCGTGCTAGGCGCCCGGG
Downstream 100 bases:
>100_bases TGAGGAGCCCGCCCCTCACTTGCCGGCCGGCGTGAAGCTCCCGTCCTTCCACACGTAGAGCACGTAGCCCTGCGCGGTGA CGTCGCCCTTGGCGTCGAAG
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRTEPAVTLHTVCGLEELAGHGARGVSHVLSLLDPGTSEPAAFTAYGAHARTTLRFHDCLGPGEGLVPPEPEHVAAILDF GRSLDGAGHLLVHCHYGLSRSTAALLTLFAQAEPDAPAAALVERLHALREPAWPNARMIGFADAMLERDGELSAAVRRLH ALQLRVRPHLAELLRGLGRGAEVDAAQAL
Sequences:
>Translated_189_residues MRTEPAVTLHTVCGLEELAGHGARGVSHVLSLLDPGTSEPAAFTAYGAHARTTLRFHDCLGPGEGLVPPEPEHVAAILDF GRSLDGAGHLLVHCHYGLSRSTAALLTLFAQAEPDAPAAALVERLHALREPAWPNARMIGFADAMLERDGELSAAVRRLH ALQLRVRPHLAELLRGLGRGAEVDAAQAL >Mature_189_residues MRTEPAVTLHTVCGLEELAGHGARGVSHVLSLLDPGTSEPAAFTAYGAHARTTLRFHDCLGPGEGLVPPEPEHVAAILDF GRSLDGAGHLLVHCHYGLSRSTAALLTLFAQAEPDAPAAALVERLHALREPAWPNARMIGFADAMLERDGELSAAVRRLH ALQLRVRPHLAELLRGLGRGAEVDAAQAL
Specific function: Unknown
COG id: COG5350
COG function: function code R; Predicted protein tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20039; Mature: 20039
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTEPAVTLHTVCGLEELAGHGARGVSHVLSLLDPGTSEPAAFTAYGAHARTTLRFHDCL CCCCCCCHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHEEEEHHHCC GPGEGLVPPEPEHVAAILDFGRSLDGAGHLLVHCHYGLSRSTAALLTLFAQAEPDAPAAA CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHH LVERLHALREPAWPNARMIGFADAMLERDGELSAAVRRLHALQLRVRPHLAELLRGLGRG HHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC AEVDAAQAL CCCCHHHCC >Mature Secondary Structure MRTEPAVTLHTVCGLEELAGHGARGVSHVLSLLDPGTSEPAAFTAYGAHARTTLRFHDCL CCCCCCCHHHHHHCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHEEEEHHHCC GPGEGLVPPEPEHVAAILDFGRSLDGAGHLLVHCHYGLSRSTAALLTLFAQAEPDAPAAA CCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCHHH LVERLHALREPAWPNARMIGFADAMLERDGELSAAVRRLHALQLRVRPHLAELLRGLGRG HHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC AEVDAAQAL CCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA