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The map label for this gene is secB [H]

Identifier: 170750110

GI number: 170750110

Start: 3950622

End: 3951122

Strand: Reverse

Name: secB [H]

Synonym: Mrad2831_3712

Alternate gene names: 170750110

Gene position: 3951122-3950622 (Counterclockwise)

Preceding gene: 170750116

Following gene: 170750109

Centisome position: 65.01

GC content: 66.27

Gene sequence:

>501_bases
ATGGCCGATTCCCCGGCAGCGAACGGCAACGGCGGCGGCATGCCGCAGGGCGATGTGCCGACCATCAATGCCCTGGCGCA
GTACACGAAGGATCTCTCCTTCGAGAACCCGAACGCGCCGCGCTCGCTCCAGCCCAAGGAGGGCCAGGGGCCGCAGATCA
ACATCCAGGTGAACGTCAACGCGCAGCAGCTCTCCGAGACCGATTTCGAGGTCGAGCTGAAGCTCGAGGGCGACGCCAAG
ATCCAGAACGAGGTGCTGTTCGCCTTCGAGGTGACCTATGCCGGCGTGTTCCGGCTCCTCAACATCCCGGCCGACCAGAT
CCATCCGGCGGTGATGATCGAGTGCCCGCGCCTGCTCTTCCCCTTCGCCCGCCAGATCGTGGCCGAGGCGGTGCGCAACG
GCGGCTTCCCGCCGCTGTACATCGACCCGATCGATTTCGTCGGGCTCTACCGGCAGAAGGTGATGGAGCAGCAGGGCGCC
CAGGGCCCGCTCGCTTCCTGA

Upstream 100 bases:

>100_bases
CGGCCCTGCCGTTTGGGCAGTTCCGCGGCGTGATCCAGCCGCTCCCGCCGCGACAACAACCCGCGCCGGCCCTGCCGGTC
GATCGAGAAGGATGATCCGC

Downstream 100 bases:

>100_bases
GTCGGGACGCGCCGGCGGCCGCTCAGCGGCCGCCGGGACCGCGATAGGCGCCCGTCAGCGCGCGCAGGGCCGCCGCTGGG
CGCCCGGCCGAGCGGCGAGC

Product: protein-export protein SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MADSPAANGNGGGMPQGDVPTINALAQYTKDLSFENPNAPRSLQPKEGQGPQINIQVNVNAQQLSETDFEVELKLEGDAK
IQNEVLFAFEVTYAGVFRLLNIPADQIHPAVMIECPRLLFPFARQIVAEAVRNGGFPPLYIDPIDFVGLYRQKVMEQQGA
QGPLAS

Sequences:

>Translated_166_residues
MADSPAANGNGGGMPQGDVPTINALAQYTKDLSFENPNAPRSLQPKEGQGPQINIQVNVNAQQLSETDFEVELKLEGDAK
IQNEVLFAFEVTYAGVFRLLNIPADQIHPAVMIECPRLLFPFARQIVAEAVRNGGFPPLYIDPIDFVGLYRQKVMEQQGA
QGPLAS
>Mature_165_residues
ADSPAANGNGGGMPQGDVPTINALAQYTKDLSFENPNAPRSLQPKEGQGPQINIQVNVNAQQLSETDFEVELKLEGDAKI
QNEVLFAFEVTYAGVFRLLNIPADQIHPAVMIECPRLLFPFARQIVAEAVRNGGFPPLYIDPIDFVGLYRQKVMEQQGAQ
GPLAS

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=132, Percent_Identity=34.8484848484849, Blast_Score=90, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 18066; Mature: 17934

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSPAANGNGGGMPQGDVPTINALAQYTKDLSFENPNAPRSLQPKEGQGPQINIQVNVN
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECC
AQQLSETDFEVELKLEGDAKIQNEVLFAFEVTYAGVFRLLNIPADQIHPAVMIECPRLLF
HHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHCCCEEEEECCHHHH
PFARQIVAEAVRNGGFPPLYIDPIDFVGLYRQKVMEQQGAQGPLAS
HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ADSPAANGNGGGMPQGDVPTINALAQYTKDLSFENPNAPRSLQPKEGQGPQINIQVNVN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECC
AQQLSETDFEVELKLEGDAKIQNEVLFAFEVTYAGVFRLLNIPADQIHPAVMIECPRLLF
HHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHCCCEEEEECCHHHH
PFARQIVAEAVRNGGFPPLYIDPIDFVGLYRQKVMEQQGAQGPLAS
HHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA