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The map label for this gene is 170750074

Identifier: 170750074

GI number: 170750074

Start: 3908790

End: 3909905

Strand: Reverse

Name: 170750074

Synonym: Mrad2831_3675

Alternate gene names: NA

Gene position: 3909905-3908790 (Counterclockwise)

Preceding gene: 170750077

Following gene: 170750073

Centisome position: 64.33

GC content: 74.01

Gene sequence:

>1116_bases
ATGGTGGACACGCGCGACGGAACCGCGTCCGGGACCGTGACGCGACTCGGCTCGAGCGCCGCGGATCCGGCCGCCCGGCG
CGGGCGCGGCGCGACGGCCAACCCGACCGGCCGGTACGAATCCGCCCGGCGCGAGGCGTTCCACGACGGGACCTGGACGG
CGGACCCTCCGGCGCCCCTGCGCACGCAGGTCACGCCGGAGCGGTCCGCCCGGATCATCGCGCGCAACGGCTCGCCCGAC
ATCCCGTTCGATCGGTCGATCAACCCGTACCGGGGCTGCGAGCACGGCTGCATCTACTGCTACGCGCGCCCCACCCATGC
CTGGCTCGGCCTTTCGCCGGGGCTCGATTTCGAGTCGCGGATCTTCACCAAGCCGGACGCCGCCCGGCTCCTCGCCCGCG
AGATCGCCGCGCCGGGCTACCGGCCAGAGACGATCGCCCTCGGCACCGCCACGGATCCCTATCAGCCGGTCGAGCGGGAG
CACCGGCTCACCCGCGGGGTGCTGGAGGTGCTGCGAGAGGCCCGCCATCCCGTCAGCATCACCACCAAGTCGGACCTCGT
GCTGCGCGACCTCGACCTTCTGGCCGAGATGGCGGCGGACGACCTCGTGCTGGCGGCGATCTCGCTGCCGACGCTGGATC
CGGACCTCGCCCGCCGCCTCGACCCGCGGGCGCCGCGGCCGGACAAGCGGCTCGCGGCGATGCGGGCGCTGAGCGCGGCG
GGAGTGCCCGTCATGGTCAACGTCTCGCCGATCATCCCCGGCCTGACCGATCACGAGATCGAGTCGATCCTGGACGAGGC
GCGCGCGCACGGGGCGAGCCGCATCGGCCACGCGCTGCTGCGCCTCCCCGGCGAAGTCGCCGACCTCGTGGCCGACTGGT
TCGCCGAGCACTATCCGGAGCGCCGGGCGCGGGCCTTCGCACTCCTGCGGGACGCCCGGGGCGGGCGCGAGAACGACCCG
CGCTTCGGCCACCGCTTCCGCGGGGAGGGGGCCTACGCGGCGATGATCGGCCAGCGGGTCCGACTCGCCGGCACCCGTCT
CGGCTTCGCCTTCGGACGGATGGATCTGAACCGCGACGCGTTCCGCAAGCCCGGCTCGCAGCTTGTGCTGCTCTGA

Upstream 100 bases:

>100_bases
CCGGACGGGCCGCGGAGCCGGATTTGCCTGAAAAAGAGGCGATCGCCGGCGGTTTGTTCGTTGTATGTTCCGATCGGTTT
CCGGAGTGGGGCGAGTCGGG

Downstream 100 bases:

>100_bases
AACGCGACCGACGCGGTGTCGCCCGCGCGCGAGGCGGCGGATCTGCCCGATCACCATATCTCCTCGATAAATTCAGTAGT
TGTTCCATGATCGTCGTCAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MVDTRDGTASGTVTRLGSSAADPAARRGRGATANPTGRYESARREAFHDGTWTADPPAPLRTQVTPERSARIIARNGSPD
IPFDRSINPYRGCEHGCIYCYARPTHAWLGLSPGLDFESRIFTKPDAARLLAREIAAPGYRPETIALGTATDPYQPVERE
HRLTRGVLEVLREARHPVSITTKSDLVLRDLDLLAEMAADDLVLAAISLPTLDPDLARRLDPRAPRPDKRLAAMRALSAA
GVPVMVNVSPIIPGLTDHEIESILDEARAHGASRIGHALLRLPGEVADLVADWFAEHYPERRARAFALLRDARGGRENDP
RFGHRFRGEGAYAAMIGQRVRLAGTRLGFAFGRMDLNRDAFRKPGSQLVLL

Sequences:

>Translated_371_residues
MVDTRDGTASGTVTRLGSSAADPAARRGRGATANPTGRYESARREAFHDGTWTADPPAPLRTQVTPERSARIIARNGSPD
IPFDRSINPYRGCEHGCIYCYARPTHAWLGLSPGLDFESRIFTKPDAARLLAREIAAPGYRPETIALGTATDPYQPVERE
HRLTRGVLEVLREARHPVSITTKSDLVLRDLDLLAEMAADDLVLAAISLPTLDPDLARRLDPRAPRPDKRLAAMRALSAA
GVPVMVNVSPIIPGLTDHEIESILDEARAHGASRIGHALLRLPGEVADLVADWFAEHYPERRARAFALLRDARGGRENDP
RFGHRFRGEGAYAAMIGQRVRLAGTRLGFAFGRMDLNRDAFRKPGSQLVLL
>Mature_371_residues
MVDTRDGTASGTVTRLGSSAADPAARRGRGATANPTGRYESARREAFHDGTWTADPPAPLRTQVTPERSARIIARNGSPD
IPFDRSINPYRGCEHGCIYCYARPTHAWLGLSPGLDFESRIFTKPDAARLLAREIAAPGYRPETIALGTATDPYQPVERE
HRLTRGVLEVLREARHPVSITTKSDLVLRDLDLLAEMAADDLVLAAISLPTLDPDLARRLDPRAPRPDKRLAAMRALSAA
GVPVMVNVSPIIPGLTDHEIESILDEARAHGASRIGHALLRLPGEVADLVADWFAEHYPERRARAFALLRDARGGRENDP
RFGHRFRGEGAYAAMIGQRVRLAGTRLGFAFGRMDLNRDAFRKPGSQLVLL

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40646; Mature: 40646

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTRDGTASGTVTRLGSSAADPAARRGRGATANPTGRYESARREAFHDGTWTADPPAPL
CCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
RTQVTPERSARIIARNGSPDIPFDRSINPYRGCEHGCIYCYARPTHAWLGLSPGLDFESR
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCHH
IFTKPDAARLLAREIAAPGYRPETIALGTATDPYQPVEREHRLTRGVLEVLREARHPVSI
CCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
TTKSDLVLRDLDLLAEMAADDLVLAAISLPTLDPDLARRLDPRAPRPDKRLAAMRALSAA
ECCCCHHHHHHHHHHHHHHHHHEEEEHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHC
GVPVMVNVSPIIPGLTDHEIESILDEARAHGASRIGHALLRLPGEVADLVADWFAEHYPE
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH
RRARAFALLRDARGGRENDPRFGHRFRGEGAYAAMIGQRVRLAGTRLGFAFGRMDLNRDA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FRKPGSQLVLL
HHCCCCCEEEC
>Mature Secondary Structure
MVDTRDGTASGTVTRLGSSAADPAARRGRGATANPTGRYESARREAFHDGTWTADPPAPL
CCCCCCCCCCCHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
RTQVTPERSARIIARNGSPDIPFDRSINPYRGCEHGCIYCYARPTHAWLGLSPGLDFESR
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCHH
IFTKPDAARLLAREIAAPGYRPETIALGTATDPYQPVEREHRLTRGVLEVLREARHPVSI
CCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
TTKSDLVLRDLDLLAEMAADDLVLAAISLPTLDPDLARRLDPRAPRPDKRLAAMRALSAA
ECCCCHHHHHHHHHHHHHHHHHEEEEHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHC
GVPVMVNVSPIIPGLTDHEIESILDEARAHGASRIGHALLRLPGEVADLVADWFAEHYPE
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH
RRARAFALLRDARGGRENDPRFGHRFRGEGAYAAMIGQRVRLAGTRLGFAFGRMDLNRDA
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FRKPGSQLVLL
HHCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]