| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750059
Identifier: 170750059
GI number: 170750059
Start: 3889828
End: 3890565
Strand: Direct
Name: 170750059
Synonym: Mrad2831_3660
Alternate gene names: NA
Gene position: 3889828-3890565 (Clockwise)
Preceding gene: 170750058
Following gene: 170750060
Centisome position: 64.0
GC content: 76.15
Gene sequence:
>738_bases ATGCGCGCCGACGCCTTCCTGGCCGCCGCCGACGCGCTGCCCGTGGCGAGCCTCGACGCCCTCCTGGGGAGCCGGGGGCT CGTGGTCGTCGCGCCCCATCCCGACGACGAGAGCCTCGGATGCGGCGGGCTGATCGCCGCCGCCCGGGCGTCGGGACGGC CCGTGCACCTCGTCGTGGTCAGCGACGGCTGCGGCTCGCACACGCATTCCCGCCTCTACCCGCCGGAGAAGCTGCGCGCC CTGCGCGAGGCGGAAACCCGGCGGGCCGTGGCCGTCCTCGGCCTCGGGCCCGATGCCGTCACCTTCCTGCGCCTGCCGGA CGCGCACGTCCCGAGCGACGGGCCGGAGGCCGAGGCGGCCGCGTCCGCGGTGGCCAGCGCGGCCGCGGCGATCGGGGCCG GCGCGGTCTTCGTCACGTGGCGTCACGATCCCCACTGCGATCACAAGGCGGCCGCCGCGATCGTCGCCCTCGCCCGGCCG CGGATGCCGGGCGTGCGGGTCTACGAGTACCCCGTCTGGGGCTGGACCCTGCCGCCCGAGACCGAGGTCGGGCCGAGCCC GGCCGGCCTGCGCCTCGACGTCTCCGCCTATCGCGAGACCAAGGCCCGCGCCGTCGCGGCCCACGAATCGCAGACCACGA ACCTGATCGCGGACGATCCCGAGGGCTTCCGTCTCGAGCCCGCCATGATCGACCGGCTCTGCGGCCCCTACGAACGCTTC GTCGCCGTGCCCGCATGA
Upstream 100 bases:
>100_bases GCGCACCGTCCCTGGAGCGTCCCGTGATCGATCCCGTCTGCAGCCCGTCGCGGTGCGACCAGCGCTCTCCCTCGGCCCCC GACCGGATCGGAGGCCGCTG
Downstream 100 bases:
>100_bases CCCGGCGGACCCAGACCCTCCCGGAGGATTACTTCCTCGGCATCTACGCCAGCGACCCGGATCCCTGGCGCTTCACCACG TCGTCCTACGAGCGCGACAA
Product: LmbE family protein
Products: NA
Alternate protein names: LmbE-Like Protein; N-Acetylglucosaminylphosphatidylinositol Deacetylase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MRADAFLAAADALPVASLDALLGSRGLVVVAPHPDDESLGCGGLIAAARASGRPVHLVVVSDGCGSHTHSRLYPPEKLRA LREAETRRAVAVLGLGPDAVTFLRLPDAHVPSDGPEAEAAASAVASAAAAIGAGAVFVTWRHDPHCDHKAAAAIVALARP RMPGVRVYEYPVWGWTLPPETEVGPSPAGLRLDVSAYRETKARAVAAHESQTTNLIADDPEGFRLEPAMIDRLCGPYERF VAVPA
Sequences:
>Translated_245_residues MRADAFLAAADALPVASLDALLGSRGLVVVAPHPDDESLGCGGLIAAARASGRPVHLVVVSDGCGSHTHSRLYPPEKLRA LREAETRRAVAVLGLGPDAVTFLRLPDAHVPSDGPEAEAAASAVASAAAAIGAGAVFVTWRHDPHCDHKAAAAIVALARP RMPGVRVYEYPVWGWTLPPETEVGPSPAGLRLDVSAYRETKARAVAAHESQTTNLIADDPEGFRLEPAMIDRLCGPYERF VAVPA >Mature_245_residues MRADAFLAAADALPVASLDALLGSRGLVVVAPHPDDESLGCGGLIAAARASGRPVHLVVVSDGCGSHTHSRLYPPEKLRA LREAETRRAVAVLGLGPDAVTFLRLPDAHVPSDGPEAEAAASAVASAAAAIGAGAVFVTWRHDPHCDHKAAAAIVALARP RMPGVRVYEYPVWGWTLPPETEVGPSPAGLRLDVSAYRETKARAVAAHESQTTNLIADDPEGFRLEPAMIDRLCGPYERF VAVPA
Specific function: Unknown
COG id: COG2120
COG function: function code S; Uncharacterized proteins, LmbE homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25604; Mature: 25604
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADAFLAAADALPVASLDALLGSRGLVVVAPHPDDESLGCGGLIAAARASGRPVHLVVV CCCCCEEEHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEE SDGCGSHTHSRLYPPEKLRALREAETRRAVAVLGLGPDAVTFLRLPDAHVPSDGPEAEAA ECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHH ASAVASAAAAIGAGAVFVTWRHDPHCDHKAAAAIVALARPRMPGVRVYEYPVWGWTLPPE HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC TEVGPSPAGLRLDVSAYRETKARAVAAHESQTTNLIADDPEGFRLEPAMIDRLCGPYERF CCCCCCCCCEEEEHHHHHHHHHHHEECCCCCCCCEEECCCCCCEECHHHHHHHCCCHHHE VAVPA EECCC >Mature Secondary Structure MRADAFLAAADALPVASLDALLGSRGLVVVAPHPDDESLGCGGLIAAARASGRPVHLVVV CCCCCEEEHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEE SDGCGSHTHSRLYPPEKLRALREAETRRAVAVLGLGPDAVTFLRLPDAHVPSDGPEAEAA ECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCCCCCHHHHH ASAVASAAAAIGAGAVFVTWRHDPHCDHKAAAAIVALARPRMPGVRVYEYPVWGWTLPPE HHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCC TEVGPSPAGLRLDVSAYRETKARAVAAHESQTTNLIADDPEGFRLEPAMIDRLCGPYERF CCCCCCCCCEEEEHHHHHHHHHHHEECCCCCCCCEEECCCCCCEECHHHHHHHCCCHHHE VAVPA EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA