Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yejA [C]

Identifier: 170750038

GI number: 170750038

Start: 3870998

End: 3872923

Strand: Direct

Name: yejA [C]

Synonym: Mrad2831_3639

Alternate gene names: 170750038

Gene position: 3870998-3872923 (Clockwise)

Preceding gene: 170750037

Following gene: 170750039

Centisome position: 63.69

GC content: 68.28

Gene sequence:

>1926_bases
GTGACAGCGCAGACCGTGACTGGACGCCTCCTCGCCGCGACACTCCTCGCCGCCTGCCTCCAGTTCGCCCCGGCCCGTGC
GCAGGAACCGGCCGCGATGCCGTCGACGCCGGCTGAGTTGCCTGCCACCCTGCCGGCCGCCAACGGCCAGTGGACCCACG
CGATCACGCTGATGGGCCAGCCGAAATACGGCCCCGACTTCAAGCATTTCGACTACGCCGACCCGGCCGCGCCCAAGGGC
GGGATGGTCCGGTTCGGGGCCCAGGGCGGGTTCGACAATTTCAACATCGTCGTCGCCGGCCTGAAGGGTGACCTCGAGAA
CGGCATCCAGCAGATCTACGATTCGCTGATGACCGAGTCCTCGGACGAGCCGTTCACCTCCTACGGCCTGCTCGCCGAGG
CGGTCCGGATCGCCCCCGATCTCGGCTCGGTCTCGTACCGGCTGCGCGAGAACGCCCGCTGGCACGACGGCCAGCCGATC
ACGCCCGAGGACGTGGTCTGGTCCTTCGACGTGCTCAAGGCCAACAGCCCGTTCTACGCCGCCTACTACCAGACCGTGGC
CAAGGCCGCGGTGACCGGGCCGCACGAGGTGACCTTCACCTTCACGGAGACCGGCAACCGCGAGTTGCCGCAGGTGATCG
GGCAGCTGCGCGTCCTGCCCAAGCACTGGTGGACCGCCAAGGACGCCAACGGCAAGCCGCGCAGCGTCACCGAGACGACC
CTGGAGCCGCCGCTGGGCTCGGGCCCCTATCGCCTCGCGAAGTTCGAGCCGGGCCGCACGACGACCTACACCCGCGTGCC
CGACTACTGGGGCAAGGACCTGCCGGTGAACGCCGGGCGCTACAACTTCGACACCGAGCGCTACGAGTATTTCCGCGACG
GCACCGTGCTGGTCGAGGCGCTGAAGGGCGACCTCTACGACTTCCGGGTGGAGAACATCGCCCGGAACTGGGCGACCGCC
TACGAGGATTTCCCGGCCGTGAAGGAGGGCCGGCTGATCAAGGAGGCGTTCCCCGAGCGCGGCATGGGCATCATGCAGGC
CTTCGCGTTCAACACGCGCCGGGACAAGTTCAAGGATCCGCGCGTCCGCCGGGCCTTCAACCTCGCGCTGAACTACGAGG
AGATGAACAAGGCCCTGTTCTACGGCCTGTACAAGCGGATCAACTCCTACTTCTTCGGCTCGGAGCTGGCCTCCTCCGGC
CTGCCCGAGGGCGAGGAGAAGGCGATCCTCGAGAGCGTCAAGGACAAGGTCCCGGCCTCGGTCTTCACCACCCCCTACGC
CAACCCGGTCAACGACGGCCCCGAGGCCGTGCGCAAGAACCTCCGCGAGGCCGTCGGCCTGCTGCGCGAGGCCGGCTACG
AGCTGCGCGGCGGCAAGATGGTCAGCAAGGCCACCGGCGAGCCGCTGACCGTCGAGTTCCTGGAGTTCCAGAACACCTTC
GAGCGGGTCATCCTGCCGTTCGCGGCGCAGCTGAAGCTGATCGGCATCGACTCCACCCTCCGGGTGATCGACCAGGCGCA
GTACCAGAACCGCATCCGCAACTTCGACTTCGACGTCACCACGGCGTCGTGGGGCGAGTCGCTCTCGCCCGGCAACGAGC
AGCGCGAGTACTGGGGCTCGGCGGCGGCCGACAAGCCCGGCTCGCGCAACCTGATCGGGATCAAGGATCCCGGCATCGAC
GCCCTGATCGAGAAGGTGATCTTCGCCAAGGACCGGCACACCGTGATCGCGGCGACGCGCGCCCTCGACCGGGTGCTCCT
CGCCCACGACTACGTCGTCCCGCAATGGTCCTCCGACCAGCAGCGGACGCTGCGCTGGAACCGGTTCGGCCACCCGGCGA
TCCTGCCGCTCTACGCCAGTTCCGGCTTCCCGACGACGTGGTGGTACGACGAGAAGCTCGCGGCCAAGACCGGGGCGCCC
CGTTGA

Upstream 100 bases:

>100_bases
CGGCGCATGGTCGACGGGTGGCCGCCCGCGTCCTATGACCCCGGTACTCTCGAGATGTCCGCGCCGCGCGCGGGCCCGAC
GCAACGGAGACAGCCTGCCC

Downstream 100 bases:

>100_bases
CGGGGGCGCCCGGGATGCCGACCCGGCGCGGCCTGGTCCTCGGGGCCGGCGCCCTCGCGGCGATGCCGCCGTGGCGCCGC
GCCCGCGCGGCCGAGGGGGC

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MTAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQPKYGPDFKHFDYADPAAPKG
GMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTESSDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPI
TPEDVVWSFDVLKANSPFYAAYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT
LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEALKGDLYDFRVENIARNWATA
YEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDPRVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSG
LPEGEEKAILESVKDKVPASVFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF
ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGSAAADKPGSRNLIGIKDPGID
ALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQQRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAP
R

Sequences:

>Translated_641_residues
MTAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQPKYGPDFKHFDYADPAAPKG
GMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTESSDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPI
TPEDVVWSFDVLKANSPFYAAYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT
LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEALKGDLYDFRVENIARNWATA
YEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDPRVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSG
LPEGEEKAILESVKDKVPASVFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF
ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGSAAADKPGSRNLIGIKDPGID
ALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQQRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAP
R
>Mature_640_residues
TAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQPKYGPDFKHFDYADPAAPKGG
MVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTESSDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPIT
PEDVVWSFDVLKANSPFYAAYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETTL
EPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEALKGDLYDFRVENIARNWATAY
EDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDPRVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSGL
PEGEEKAILESVKDKVPASVFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTFE
RVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGSAAADKPGSRNLIGIKDPGIDA
LIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQQRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAPR

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=588, Percent_Identity=37.7551020408163, Blast_Score=386, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 71553; Mature: 71422

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
PKYGPDFKHFDYADPAAPKGGMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTES
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC
SDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPITPEDVVWSFDVLKANSPFYA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHEEEEEEEECCCCCHH
AYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEA
CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
LKGDLYDFRVENIARNWATAYEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDP
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHCCCCC
RVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSGLPEGEEKAILESVKDKVPAS
HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCC
VFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHHHHHHH
ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGS
HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHCCC
AAADKPGSRNLIGIKDPGIDALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQ
CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH
QRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAPR
HHHHHHHCCCCCEEEEEEECCCCCCEEEECCHHHCCCCCCC
>Mature Secondary Structure 
TAQTVTGRLLAATLLAACLQFAPARAQEPAAMPSTPAELPATLPAANGQWTHAITLMGQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC
PKYGPDFKHFDYADPAAPKGGMVRFGAQGGFDNFNIVVAGLKGDLENGIQQIYDSLMTES
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCC
SDEPFTSYGLLAEAVRIAPDLGSVSYRLRENARWHDGQPITPEDVVWSFDVLKANSPFYA
CCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHEEEEEEEECCCCCHH
AYYQTVAKAAVTGPHEVTFTFTETGNRELPQVIGQLRVLPKHWWTAKDANGKPRSVTETT
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
LEPPLGSGPYRLAKFEPGRTTTYTRVPDYWGKDLPVNAGRYNFDTERYEYFRDGTVLVEA
CCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
LKGDLYDFRVENIARNWATAYEDFPAVKEGRLIKEAFPERGMGIMQAFAFNTRRDKFKDP
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHCCCHHCCCCC
RVRRAFNLALNYEEMNKALFYGLYKRINSYFFGSELASSGLPEGEEKAILESVKDKVPAS
HHHHHHHHEECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCC
VFTTPYANPVNDGPEAVRKNLREAVGLLREAGYELRGGKMVSKATGEPLTVEFLEFQNTF
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEHHHHHHHHH
ERVILPFAAQLKLIGIDSTLRVIDQAQYQNRIRNFDFDVTTASWGESLSPGNEQREYWGS
HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHCCC
AAADKPGSRNLIGIKDPGIDALIEKVIFAKDRHTVIAATRALDRVLLAHDYVVPQWSSDQ
CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH
QRTLRWNRFGHPAILPLYASSGFPTTWWYDEKLAAKTGAPR
HHHHHHHCCCCCEEEEEEECCCCCCEEEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]