| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is catD [H]
Identifier: 170750005
GI number: 170750005
Start: 3833307
End: 3834104
Strand: Reverse
Name: catD [H]
Synonym: Mrad2831_3606
Alternate gene names: 170750005
Gene position: 3834104-3833307 (Counterclockwise)
Preceding gene: 170750006
Following gene: 170749997
Centisome position: 63.08
GC content: 74.94
Gene sequence:
>798_bases ATGCCGCAGATCACCGTCGGAGGACTCGGCCTCCGCTACCACCTTGAGGGTCCCGAGGACGCTCCGGTCGTCGCCTTCTC GAACTCGCTGGGGGCGACCCTTGAAATGTGGGACGCGCTCCTGCCGGCGCTCGCGGGACGCTACCGGACGCTGCGCTACG ACACCCGCGGCCACGGCGGATCGGACACGCGCGACCGGCCCACGGCGATCGCGGATCTGGCCGGGGACCTCGCGGGCCTG CTGGACGCCCTCGGCATCGGCCGGGCCCATCTGGTCGGCCTGTCGCTCGGCGGGATGACCGTGCAGGCGCTGGCGAGCGC CGATCCCGGACGGGCGCTCAGTGCCACCCTGATGGCGACGGCGGCCTTCCTGCCGAGCCAGCAGAGCTGGGATGAGCGGG CCGCGACCGTGCGCGCCCAGGGAACGTCGGCCGTGGTCGAGGCGACGCTGGGGCGCTGGTTCACGCCGGGCTTCGCGGCG CGCGACCCCGAGGCGGTCCGGGCTGTCCGCGAGCGATTCCTGGCCTGCGATCCGGCCGGTTACGCGGTCTGCTGCGGGGC GATCGGACGCATGGATCTCCGTCCGGCGCTCGGAGCCATCACCGCGCCGACCCTGGTCATCGCCGGCCGCGACGATCCCT CGACACCTCCGGCCATGGCCGAGGAGATCTGCGGCGGCATCGCCCAGGCCGAGCTCGTCGTGCTGCCCCGCGCGGCGCAC CTGCTGGCCGTCGAGCGCGCGGACGCGGTCGGCGCCTACCTGCGCGCCTTCCTCGACCGCGCCGCGCCGGGCGCGTAG
Upstream 100 bases:
>100_bases GGTCGCGCCTGAATGCCGTCGGGGGATGGCGATGCCCGCGATCCCCGCCCCGCCGCCCGCCGGCGCGACACCCTCGAGAG CCCGGACCGGAGAGAGCCGC
Downstream 100 bases:
>100_bases CCGGGCCGCCGCGGCGTCCCGGCGATCGCCTCAGGGGAGGGGTCGCGCGCCGCGAGCGGGATCCTGCGCCGCTTCAGTGG CAGGCGATGCCGACATCGGC
Product: 3-oxoadipate enol-lactonase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPQITVGGLGLRYHLEGPEDAPVVAFSNSLGATLEMWDALLPALAGRYRTLRYDTRGHGGSDTRDRPTAIADLAGDLAGL LDALGIGRAHLVGLSLGGMTVQALASADPGRALSATLMATAAFLPSQQSWDERAATVRAQGTSAVVEATLGRWFTPGFAA RDPEAVRAVRERFLACDPAGYAVCCGAIGRMDLRPALGAITAPTLVIAGRDDPSTPPAMAEEICGGIAQAELVVLPRAAH LLAVERADAVGAYLRAFLDRAAPGA
Sequences:
>Translated_265_residues MPQITVGGLGLRYHLEGPEDAPVVAFSNSLGATLEMWDALLPALAGRYRTLRYDTRGHGGSDTRDRPTAIADLAGDLAGL LDALGIGRAHLVGLSLGGMTVQALASADPGRALSATLMATAAFLPSQQSWDERAATVRAQGTSAVVEATLGRWFTPGFAA RDPEAVRAVRERFLACDPAGYAVCCGAIGRMDLRPALGAITAPTLVIAGRDDPSTPPAMAEEICGGIAQAELVVLPRAAH LLAVERADAVGAYLRAFLDRAAPGA >Mature_264_residues PQITVGGLGLRYHLEGPEDAPVVAFSNSLGATLEMWDALLPALAGRYRTLRYDTRGHGGSDTRDRPTAIADLAGDLAGLL DALGIGRAHLVGLSLGGMTVQALASADPGRALSATLMATAAFLPSQQSWDERAATVRAQGTSAVVEATLGRWFTPGFAAR DPEAVRAVRERFLACDPAGYAVCCGAIGRMDLRPALGAITAPTLVIAGRDDPSTPPAMAEEICGGIAQAELVVLPRAAHL LAVERADAVGAYLRAFLDRAAPGA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 27408; Mature: 27276
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQITVGGLGLRYHLEGPEDAPVVAFSNSLGATLEMWDALLPALAGRYRTLRYDTRGHGG CCCEEEECCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC SDTRDRPTAIADLAGDLAGLLDALGIGRAHLVGLSLGGMTVQALASADPGRALSATLMAT CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHCCCCCHHHHHHHHHH AAFLPSQQSWDERAATVRAQGTSAVVEATLGRWFTPGFAARDPEAVRAVRERFLACDPAG HHHCCCCCCHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC YAVCCGAIGRMDLRPALGAITAPTLVIAGRDDPSTPPAMAEEICGGIAQAELVVLPRAAH HHHHHHHHCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCHHHHEEEEECCHHH LLAVERADAVGAYLRAFLDRAAPGA HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PQITVGGLGLRYHLEGPEDAPVVAFSNSLGATLEMWDALLPALAGRYRTLRYDTRGHGG CCEEEECCEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCC SDTRDRPTAIADLAGDLAGLLDALGIGRAHLVGLSLGGMTVQALASADPGRALSATLMAT CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEEECCCHHHHHHHCCCCCHHHHHHHHHH AAFLPSQQSWDERAATVRAQGTSAVVEATLGRWFTPGFAARDPEAVRAVRERFLACDPAG HHHCCCCCCHHHHHHEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC YAVCCGAIGRMDLRPALGAITAPTLVIAGRDDPSTPPAMAEEICGGIAQAELVVLPRAAH HHHHHHHHCCCCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCHHHHEEEEECCHHH LLAVERADAVGAYLRAFLDRAAPGA HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]