| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is srpC [H]
Identifier: 170749982
GI number: 170749982
Start: 3807687
End: 3809069
Strand: Reverse
Name: srpC [H]
Synonym: Mrad2831_3583
Alternate gene names: 170749982
Gene position: 3809069-3807687 (Counterclockwise)
Preceding gene: 170749983
Following gene: 170749980
Centisome position: 62.67
GC content: 76.14
Gene sequence:
>1383_bases GTGGGCGCGCCTGATCGAGACCGGGCTGCCGCGCAGCGCCTGAGCGCGCCGCCCGCCGCCCCGTCGCTGGCCGAGGCCGT CCCGGTCTGGCTGCGGGTGGCGGCGCTCTCCTTCGGCGGGCCGGCCGGGCAGATCGCCGTGATGCACCGCATCCTGGTGG ACGAGCGGCGCTGGATCTCGGAGCGGCGCTTCCTGCACGGGCTCGGGTTCTGCACCCTGCTGCCGGGGCCGGAGGCGCAG CAGCTCGCCACCTATATCGGCTGGCTCATGCACGGGCCGGCGGGCGGCCTCGTCGCCGGGGGGCTGTTCGTGCTGCCCGG GCTCCTCGCCCTGATGGCCCTGAGCTGGCTCTACGTGCTCTACGGCCATGTCGACGCGGTCGCCGGGCTGTTCTTCGGCC TCAAGGCGGCGGTGCTCGCCATCGTGCTGCACGCCCTGTGGCGGCTCGGCGGCCGCGCCCTGCGTGACCGGACGGACCGG CTCGTGGCCCTCGCGGCCTTCGTGGCGATCTTCGCCCTCGCGGTGCCGTTCCCGCTGGTCGTGGTCGCCGCCGGCGCGCT CGGCCTCGCCCGCGGCCGGCGCCCGGCCGCCGAGCGCGCGGTGGATCCGGCGGAGGAGGCGGACGTCCTGATCGGCGAGG CGGCGCTGCCGCGGGAGCGCGTCGGCGCCGCGTCCTCGCTGCGGACGGCCGCGCTCTGGCTCGCGGTCTGGCTCCTGCCG GTGGCGGCGCTGCTGGTCCTGCCCGGCGTGCCGCCGGTCTTCGGGCAGGTGGCGCTGTTCTTCTCCAAGATGGCCCTCGT GACCTTCGGGGGCGCCTACGCGGCGCTCGCCTACGTGGCGCAGCAGGCCGTGGAGCAGTTCGGCTGGCTGAAGCCCGGCG AGATGCTCGACGGACTCGGGCTCGCCGAGACCACGCCCGGCCCGCTGATCATGGTGCTCCAGTTCGTGGGCTTCCTGGCG GGCTTCCGGGCGCCCGGCGCCCTGCCGCCGCTGCTCGCCGGGACGCTCGCCGGGCTGCTGACGACCTGGGTCACCTTCGT GCCGTGCTTCCTGTGGATCTTCGCCGGCGCGCCGCTGATCGGGCGCCTGCGCGGCAGCCGCCGGCTCGCCGGCGCCCTCT CGGCGATCACCGCCGCGGTGGCGGGCGTGATCCTCAACCTCGCGGTGTGGTTCGGGCTGCGAACGCTGTTCGCCCAGGTC GAGACGGTGCCGCTCGGGCCGCTCAGGCTCGACCTGCCGGTGCCGGGCAGCCTGGACCCGGCCGCCCTGCTGCTGACCCT GGCGGCGATCCTCGCGGTCTTCCGGTTCGGGCTCGGGACGCTCCAGACCCTGGCGCTGTGCGCCGGGGCCGGGATCCTGC TGCGGCAGGCGGGGCTCGCTTGA
Upstream 100 bases:
>100_bases GCCCCGGCGCGTACATGTTCATCGGCAACGGCGACAGTGCCTCGCTCCACCACCCGCACTACGACTTCAACGACGCGGCC GCGCCGTACGGGGCTTCCCT
Downstream 100 bases:
>100_bases GCCGCTCCGTCGTCCCGAGCGCAGCGAAGAGCGGCGATCAGCCGCCGTAGCGGGCCTTGAGCAGCGCGTAGGTCAGCCGC GCGGTCTGGACCTCGCCGCC
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MGAPDRDRAAAQRLSAPPAAPSLAEAVPVWLRVAALSFGGPAGQIAVMHRILVDERRWISERRFLHGLGFCTLLPGPEAQ QLATYIGWLMHGPAGGLVAGGLFVLPGLLALMALSWLYVLYGHVDAVAGLFFGLKAAVLAIVLHALWRLGGRALRDRTDR LVALAAFVAIFALAVPFPLVVVAAGALGLARGRRPAAERAVDPAEEADVLIGEAALPRERVGAASSLRTAALWLAVWLLP VAALLVLPGVPPVFGQVALFFSKMALVTFGGAYAALAYVAQQAVEQFGWLKPGEMLDGLGLAETTPGPLIMVLQFVGFLA GFRAPGALPPLLAGTLAGLLTTWVTFVPCFLWIFAGAPLIGRLRGSRRLAGALSAITAAVAGVILNLAVWFGLRTLFAQV ETVPLGPLRLDLPVPGSLDPAALLLTLAAILAVFRFGLGTLQTLALCAGAGILLRQAGLA
Sequences:
>Translated_460_residues MGAPDRDRAAAQRLSAPPAAPSLAEAVPVWLRVAALSFGGPAGQIAVMHRILVDERRWISERRFLHGLGFCTLLPGPEAQ QLATYIGWLMHGPAGGLVAGGLFVLPGLLALMALSWLYVLYGHVDAVAGLFFGLKAAVLAIVLHALWRLGGRALRDRTDR LVALAAFVAIFALAVPFPLVVVAAGALGLARGRRPAAERAVDPAEEADVLIGEAALPRERVGAASSLRTAALWLAVWLLP VAALLVLPGVPPVFGQVALFFSKMALVTFGGAYAALAYVAQQAVEQFGWLKPGEMLDGLGLAETTPGPLIMVLQFVGFLA GFRAPGALPPLLAGTLAGLLTTWVTFVPCFLWIFAGAPLIGRLRGSRRLAGALSAITAAVAGVILNLAVWFGLRTLFAQV ETVPLGPLRLDLPVPGSLDPAALLLTLAAILAVFRFGLGTLQTLALCAGAGILLRQAGLA >Mature_459_residues GAPDRDRAAAQRLSAPPAAPSLAEAVPVWLRVAALSFGGPAGQIAVMHRILVDERRWISERRFLHGLGFCTLLPGPEAQQ LATYIGWLMHGPAGGLVAGGLFVLPGLLALMALSWLYVLYGHVDAVAGLFFGLKAAVLAIVLHALWRLGGRALRDRTDRL VALAAFVAIFALAVPFPLVVVAAGALGLARGRRPAAERAVDPAEEADVLIGEAALPRERVGAASSLRTAALWLAVWLLPV AALLVLPGVPPVFGQVALFFSKMALVTFGGAYAALAYVAQQAVEQFGWLKPGEMLDGLGLAETTPGPLIMVLQFVGFLAG FRAPGALPPLLAGTLAGLLTTWVTFVPCFLWIFAGAPLIGRLRGSRRLAGALSAITAAVAGVILNLAVWFGLRTLFAQVE TVPLGPLRLDLPVPGSLDPAALLLTLAAILAVFRFGLGTLQTLALCAGAGILLRQAGLA
Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 47927; Mature: 47796
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAPDRDRAAAQRLSAPPAAPSLAEAVPVWLRVAALSFGGPAGQIAVMHRILVDERRWIS CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ERRFLHGLGFCTLLPGPEAQQLATYIGWLMHGPAGGLVAGGLFVLPGLLALMALSWLYVL HHHHHHHCCHHEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YGHVDAVAGLFFGLKAAVLAIVLHALWRLGGRALRDRTDRLVALAAFVAIFALAVPFPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAAGALGLARGRRPAAERAVDPAEEADVLIGEAALPRERVGAASSLRTAALWLAVWLLP HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH VAALLVLPGVPPVFGQVALFFSKMALVTFGGAYAALAYVAQQAVEQFGWLKPGEMLDGLG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC LAETTPGPLIMVLQFVGFLAGFRAPGALPPLLAGTLAGLLTTWVTFVPCFLWIFAGAPLI CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GRLRGSRRLAGALSAITAAVAGVILNLAVWFGLRTLFAQVETVPLGPLRLDLPVPGSLDP HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCH AALLLTLAAILAVFRFGLGTLQTLALCAGAGILLRQAGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC >Mature Secondary Structure GAPDRDRAAAQRLSAPPAAPSLAEAVPVWLRVAALSFGGPAGQIAVMHRILVDERRWIS CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ERRFLHGLGFCTLLPGPEAQQLATYIGWLMHGPAGGLVAGGLFVLPGLLALMALSWLYVL HHHHHHHCCHHEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YGHVDAVAGLFFGLKAAVLAIVLHALWRLGGRALRDRTDRLVALAAFVAIFALAVPFPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVAAGALGLARGRRPAAERAVDPAEEADVLIGEAALPRERVGAASSLRTAALWLAVWLLP HHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH VAALLVLPGVPPVFGQVALFFSKMALVTFGGAYAALAYVAQQAVEQFGWLKPGEMLDGLG HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC LAETTPGPLIMVLQFVGFLAGFRAPGALPPLLAGTLAGLLTTWVTFVPCFLWIFAGAPLI CCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH GRLRGSRRLAGALSAITAAVAGVILNLAVWFGLRTLFAQVETVPLGPLRLDLPVPGSLDP HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCH AALLLTLAAILAVFRFGLGTLQTLALCAGAGILLRQAGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7536734 [H]