| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is pepA [H]
Identifier: 170749981
GI number: 170749981
Start: 3806249
End: 3807649
Strand: Direct
Name: pepA [H]
Synonym: Mrad2831_3582
Alternate gene names: 170749981
Gene position: 3806249-3807649 (Clockwise)
Preceding gene: 170749975
Following gene: 170749986
Centisome position: 62.63
GC content: 75.16
Gene sequence:
>1401_bases ATGACCCAGGCCGAGATTCCGGCGACGACCCGCGGGCTCCTGCCCGGCGACACCCAGGCCGTACCGGTGACGCTGGTCAC GACGGGGGATTGGGCGGTCGTCGAGTCCGGCCTGGAGCCGGCCCAGCGGAGCTTCGCCCAGGCCATCGGCTTCACGCCGA AGGCGGGCAGCCTCGCGCTCCTGCCCGGCCCGGACGGCAGCCTCGCGCGGGTCCTGTTCGGCCTCGGCGATCCGGAGGCG GCCAACTACGACCGTCTCCTCGTCGGCAAGCTGCCGGGGCTGCTGCCGGAGGGGATCTTCCGCCTCGAGAACGCCGCCGA GCCGCATGAGGCCGCCCTCGCCTGGCTGATGGGGAGCTACCGCTTCGGCCGCTACCGGTCCGGCGGCGGGACCAAGGCCC GGCTCGCGGCGCCGGCCGGCATCGACGTGGCCGAGGTCGAGCGGATCGCCGCCGCGGTCGCGCTGGGCCGGGATCTCGTC AACACGCCGGCCAACGATCTCGGACCCGCCGAGATCGAGGCGGCTGCCCGGGCACTCGGCGACCGTCACGGCGCCACCGT CACGGTGACGGAGGGCGCGGCCCTCGCCGAGGGGTACCCGCTGATCCACGCGGTCGGCGCCGCCTCGCCCCGGGCACCGC GGCTGATCGACCTGACCTGGGGGCCGGCGGACGCGCCGCGCGTGACCCTGGTCGGCAAGGGCGTCGCCTTCGACACCGGC GGCCTCGACCTCAAGCCGTCGGCCGCGATGCTGCTGATGAAGAAGGATATGGGCGGCGCCGCCGCGGCGCTGGCCGCCGC TGACATGGTCATGGGCGCGGGCCTGACCCTGCGCCTGCGCCTGCTGATCCCCGCGGTGGAGAACGCGGTCGCGGGCAACG CCTTCCGCCCCGGCGACGTGCTGCCCAGCCGGGCCGGGCTCAGCGTCGAGATCGGCAACACCGACGCGGAGGGCCGGCTG ATCCTCGCCGACGCGCTCGCCCTCGCGGACGCCGACGCGCCCGAGCTGATCCTCGACTTCTCGACCCTGACCGGTGCGGC CCGGGTGGCCCTCGGGCCGGACCTGCCGGCCTTCTTCACGGAGGACGACGCGCTGGCCGAGGCGGTGGCGCGGGCCGGGC GGACGGCGATCGATCCGGTCTGGCGCATGCCGCTGCACGCGCCCTACGCGAGCCTGCTCGACTCCAAGGTGGCCGATCTC AACAACGTCTCCGGCGGGCCGTTCGCGGGGGCGATCACCGCGGCCCTGTTCCTGCGCCGCTTCGCGCCCAACACGAGGGC GCACGGCCATTTCGACCTCTACGGCTGGAACCCCTCGACCAAGCCCGGCCGGCCGGAGGGCGGCGAGGTCCAGACCGCGC GGCTGACCTACGCGCTGCTCAAGGCCCGCTACGGCGGCTGA
Upstream 100 bases:
>100_bases GACGCGATGGCACGCGCTTCACGCTCCCGGCCGGCCGGTGATAGAGCGTTAACCCTAATCACCGGTTAAGCCGCCGCTCC GGGCGGCACGCGAGAGGCAC
Downstream 100 bases:
>100_bases TCGCCGCTCTTCGCTGCGCTCGGGACGACGGAGCGGCTCAAGCGAGCCCCGCCTGCCGCAGCAGGATCCCGGCCCCGGCG CACAGCGCCAGGGTCTGGAG
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MTQAEIPATTRGLLPGDTQAVPVTLVTTGDWAVVESGLEPAQRSFAQAIGFTPKAGSLALLPGPDGSLARVLFGLGDPEA ANYDRLLVGKLPGLLPEGIFRLENAAEPHEAALAWLMGSYRFGRYRSGGGTKARLAAPAGIDVAEVERIAAAVALGRDLV NTPANDLGPAEIEAAARALGDRHGATVTVTEGAALAEGYPLIHAVGAASPRAPRLIDLTWGPADAPRVTLVGKGVAFDTG GLDLKPSAAMLLMKKDMGGAAAALAAADMVMGAGLTLRLRLLIPAVENAVAGNAFRPGDVLPSRAGLSVEIGNTDAEGRL ILADALALADADAPELILDFSTLTGAARVALGPDLPAFFTEDDALAEAVARAGRTAIDPVWRMPLHAPYASLLDSKVADL NNVSGGPFAGAITAALFLRRFAPNTRAHGHFDLYGWNPSTKPGRPEGGEVQTARLTYALLKARYGG
Sequences:
>Translated_466_residues MTQAEIPATTRGLLPGDTQAVPVTLVTTGDWAVVESGLEPAQRSFAQAIGFTPKAGSLALLPGPDGSLARVLFGLGDPEA ANYDRLLVGKLPGLLPEGIFRLENAAEPHEAALAWLMGSYRFGRYRSGGGTKARLAAPAGIDVAEVERIAAAVALGRDLV NTPANDLGPAEIEAAARALGDRHGATVTVTEGAALAEGYPLIHAVGAASPRAPRLIDLTWGPADAPRVTLVGKGVAFDTG GLDLKPSAAMLLMKKDMGGAAAALAAADMVMGAGLTLRLRLLIPAVENAVAGNAFRPGDVLPSRAGLSVEIGNTDAEGRL ILADALALADADAPELILDFSTLTGAARVALGPDLPAFFTEDDALAEAVARAGRTAIDPVWRMPLHAPYASLLDSKVADL NNVSGGPFAGAITAALFLRRFAPNTRAHGHFDLYGWNPSTKPGRPEGGEVQTARLTYALLKARYGG >Mature_465_residues TQAEIPATTRGLLPGDTQAVPVTLVTTGDWAVVESGLEPAQRSFAQAIGFTPKAGSLALLPGPDGSLARVLFGLGDPEAA NYDRLLVGKLPGLLPEGIFRLENAAEPHEAALAWLMGSYRFGRYRSGGGTKARLAAPAGIDVAEVERIAAAVALGRDLVN TPANDLGPAEIEAAARALGDRHGATVTVTEGAALAEGYPLIHAVGAASPRAPRLIDLTWGPADAPRVTLVGKGVAFDTGG LDLKPSAAMLLMKKDMGGAAAALAAADMVMGAGLTLRLRLLIPAVENAVAGNAFRPGDVLPSRAGLSVEIGNTDAEGRLI LADALALADADAPELILDFSTLTGAARVALGPDLPAFFTEDDALAEAVARAGRTAIDPVWRMPLHAPYASLLDSKVADLN NVSGGPFAGAITAALFLRRFAPNTRAHGHFDLYGWNPSTKPGRPEGGEVQTARLTYALLKARYGG
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=296, Percent_Identity=37.1621621621622, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI47155554, Length=270, Percent_Identity=35.5555555555556, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI87082123, Length=350, Percent_Identity=39.4285714285714, Blast_Score=204, Evalue=9e-54, Organism=Escherichia coli, GI1790710, Length=286, Percent_Identity=37.7622377622378, Blast_Score=169, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17556903, Length=267, Percent_Identity=37.8277153558052, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17565172, Length=222, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355725, Length=341, Percent_Identity=33.7243401759531, Blast_Score=151, Evalue=9e-37, Organism=Drosophila melanogaster, GI24661038, Length=341, Percent_Identity=33.1378299120235, Blast_Score=150, Evalue=1e-36, Organism=Drosophila melanogaster, GI21357381, Length=275, Percent_Identity=36, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI221379063, Length=275, Percent_Identity=36, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI221379062, Length=275, Percent_Identity=36, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI20129969, Length=324, Percent_Identity=28.7037037037037, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI21355645, Length=345, Percent_Identity=28.695652173913, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24662223, Length=345, Percent_Identity=28.695652173913, Blast_Score=102, Evalue=5e-22, Organism=Drosophila melanogaster, GI24662227, Length=304, Percent_Identity=28.2894736842105, Blast_Score=102, Evalue=6e-22, Organism=Drosophila melanogaster, GI161077148, Length=294, Percent_Identity=28.9115646258503, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI20130057, Length=294, Percent_Identity=28.9115646258503, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24646701, Length=207, Percent_Identity=33.8164251207729, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI24646703, Length=207, Percent_Identity=33.8164251207729, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI21358201, Length=207, Percent_Identity=33.8164251207729, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI20129963, Length=276, Percent_Identity=27.8985507246377, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI19922386, Length=322, Percent_Identity=25.776397515528, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 47965; Mature: 47834
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAEIPATTRGLLPGDTQAVPVTLVTTGDWAVVESGLEPAQRSFAQAIGFTPKAGSLAL CCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEE LPGPDGSLARVLFGLGDPEAANYDRLLVGKLPGLLPEGIFRLENAAEPHEAALAWLMGSY EECCCCHHHHHHHCCCCCCCCCCCEEEEHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC RFGRYRSGGGTKARLAAPAGIDVAEVERIAAAVALGRDLVNTPANDLGPAEIEAAARALG CCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC DRHGATVTVTEGAALAEGYPLIHAVGAASPRAPRLIDLTWGPADAPRVTLVGKGVAFDTG CCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCEEECCC GLDLKPSAAMLLMKKDMGGAAAALAAADMVMGAGLTLRLRLLIPAVENAVAGNAFRPGDV CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCC LPSRAGLSVEIGNTDAEGRLILADALALADADAPELILDFSTLTGAARVALGPDLPAFFT CCCCCCCEEEECCCCCCCCEEEEEHHHHCCCCCCCEEEEEHHHCCCEEEEECCCCCCEEC EDDALAEAVARAGRTAIDPVWRMPLHAPYASLLDSKVADLNNVSGGPFAGAITAALFLRR CCHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FAPNTRAHGHFDLYGWNPSTKPGRPEGGEVQTARLTYALLKARYGG HCCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCC >Mature Secondary Structure TQAEIPATTRGLLPGDTQAVPVTLVTTGDWAVVESGLEPAQRSFAQAIGFTPKAGSLAL CCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCEEE LPGPDGSLARVLFGLGDPEAANYDRLLVGKLPGLLPEGIFRLENAAEPHEAALAWLMGSY EECCCCHHHHHHHCCCCCCCCCCCEEEEHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCC RFGRYRSGGGTKARLAAPAGIDVAEVERIAAAVALGRDLVNTPANDLGPAEIEAAARALG CCCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC DRHGATVTVTEGAALAEGYPLIHAVGAASPRAPRLIDLTWGPADAPRVTLVGKGVAFDTG CCCCCEEEEECCCHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEECCEEECCC GLDLKPSAAMLLMKKDMGGAAAALAAADMVMGAGLTLRLRLLIPAVENAVAGNAFRPGDV CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHCCCCCCCCCC LPSRAGLSVEIGNTDAEGRLILADALALADADAPELILDFSTLTGAARVALGPDLPAFFT CCCCCCCEEEECCCCCCCCEEEEEHHHHCCCCCCCEEEEEHHHCCCEEEEECCCCCCEEC EDDALAEAVARAGRTAIDPVWRMPLHAPYASLLDSKVADLNNVSGGPFAGAITAALFLRR CCHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH FAPNTRAHGHFDLYGWNPSTKPGRPEGGEVQTARLTYALLKARYGG HCCCCCCCCEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA