| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749980
Identifier: 170749980
GI number: 170749980
Start: 3805304
End: 3806122
Strand: Reverse
Name: 170749980
Synonym: Mrad2831_3581
Alternate gene names: NA
Gene position: 3806122-3805304 (Counterclockwise)
Preceding gene: 170749982
Following gene: 170749979
Centisome position: 62.62
GC content: 75.95
Gene sequence:
>819_bases ATGATGACGGCCCTGTTCCGGGTCACCCAGTCCCAGGCCCGTGCCGGACGCCGCGCGGCCCTCGCGGCCGCCGTCGCGCT CGGCCTCGCCGGCTGCAACACCGGCTCTCCGGAAACGACCGGCTCGATCGGCCCCCTCGGCGGCCCATCCGCGGCCGCCG CGGCGCCCTCGCGGCAGGACGTCGACCGGCTGGCCGAGCGCTTCAACGCCGACCCCGCCGACGGGCGCACGGCGATGGCC TACGCCCGCGCCCTGCGGGCCACCGATCAGATCAGCCAGGCCTCGGCGGTGCTGCAGCAGGCCGCCCTGCGCAACCCGCG CGACCGGGCCCTTCTCGGCGCCTACGGCAAGTCGCTGGTCGAAGCGGGCCGCTTCCGCGAGGCGATCGACGTGCTGGCCA ACGCGCACACCCCCGCCAATCCCGACTGGCGCATCCTGTCGGCGCAGGGCTCGGCCTCCGCCCAGCTCGGCGAGCAGGCC CGCGCGCAGGGCTTCTACGAGGCCGCCCTCAAGATTCGGCCGAACGAGCCCTCGCTCCTGTCCAATCTCGGCCTGTCCTA CGCGCTGTCGCGCAACCTCGATCAGGCCGAGCAGACCCTGCGGCTCGCCGCCGACCAGCCCGGCGCCGACGCGCGGGTGC GGGCAAACCTCGCCATGGTCCTGAGCCTCAAGGGCCGCTTCGCCGACGCCGAGGCCGTCCTGCGCCGCGACATGAGCGCC GAGGAGGCGGCCACGAACGTCGCGTCCCTGCGCCGGCTCGCGGCCCAGCCGAACCGGTCGAAGGCGCTGTCCGGCGCGGG CGCGCCGGGGCAGGGGTGA
Upstream 100 bases:
>100_bases GCGGCTTAACCGGTGATTAGGGTTAACGCTCTATCACCGGCCGGCCGGGAGCGTGAAGCGCGTGCCATCGCGTCCGGTCC AGATGCCGGCGGAGCGCACC
Downstream 100 bases:
>100_bases TCGGCGACCCGACGGCCGGCCGCGCCGTCATTCCAGGGGGCCGAAGGCGAGGCCGGAGGCCAGGACCAGCGTCGCAGCCG GATCGCCCCGCGCCGGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Pilus Assembly Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; Flp Pilus Assembly Protein TadD; Tetratricopeptide-Repeat Containing Protein; TPR Domain-Containing Protein
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQDVDRLAERFNADPADGRTAMA YARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLVEAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQA RAQGFYEAALKIRPNEPSLLSNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA EEAATNVASLRRLAAQPNRSKALSGAGAPGQG
Sequences:
>Translated_272_residues MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQDVDRLAERFNADPADGRTAMA YARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLVEAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQA RAQGFYEAALKIRPNEPSLLSNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA EEAATNVASLRRLAAQPNRSKALSGAGAPGQG >Mature_272_residues MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQDVDRLAERFNADPADGRTAMA YARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLVEAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQA RAQGFYEAALKIRPNEPSLLSNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA EEAATNVASLRRLAAQPNRSKALSGAGAPGQG
Specific function: Unknown
COG id: COG5010
COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28268; Mature: 28268
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH VDRLAERFNADPADGRTAMAYARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQARAQGFYEAALKIRPNEPSLL HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHH SNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA HHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHCCCH EEAATNVASLRRLAAQPNRSKALSGAGAPGQG HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC >Mature Secondary Structure MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH VDRLAERFNADPADGRTAMAYARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLV HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQARAQGFYEAALKIRPNEPSLL HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHH SNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA HHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHCCCH EEAATNVASLRRLAAQPNRSKALSGAGAPGQG HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA