Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170749980

Identifier: 170749980

GI number: 170749980

Start: 3805304

End: 3806122

Strand: Reverse

Name: 170749980

Synonym: Mrad2831_3581

Alternate gene names: NA

Gene position: 3806122-3805304 (Counterclockwise)

Preceding gene: 170749982

Following gene: 170749979

Centisome position: 62.62

GC content: 75.95

Gene sequence:

>819_bases
ATGATGACGGCCCTGTTCCGGGTCACCCAGTCCCAGGCCCGTGCCGGACGCCGCGCGGCCCTCGCGGCCGCCGTCGCGCT
CGGCCTCGCCGGCTGCAACACCGGCTCTCCGGAAACGACCGGCTCGATCGGCCCCCTCGGCGGCCCATCCGCGGCCGCCG
CGGCGCCCTCGCGGCAGGACGTCGACCGGCTGGCCGAGCGCTTCAACGCCGACCCCGCCGACGGGCGCACGGCGATGGCC
TACGCCCGCGCCCTGCGGGCCACCGATCAGATCAGCCAGGCCTCGGCGGTGCTGCAGCAGGCCGCCCTGCGCAACCCGCG
CGACCGGGCCCTTCTCGGCGCCTACGGCAAGTCGCTGGTCGAAGCGGGCCGCTTCCGCGAGGCGATCGACGTGCTGGCCA
ACGCGCACACCCCCGCCAATCCCGACTGGCGCATCCTGTCGGCGCAGGGCTCGGCCTCCGCCCAGCTCGGCGAGCAGGCC
CGCGCGCAGGGCTTCTACGAGGCCGCCCTCAAGATTCGGCCGAACGAGCCCTCGCTCCTGTCCAATCTCGGCCTGTCCTA
CGCGCTGTCGCGCAACCTCGATCAGGCCGAGCAGACCCTGCGGCTCGCCGCCGACCAGCCCGGCGCCGACGCGCGGGTGC
GGGCAAACCTCGCCATGGTCCTGAGCCTCAAGGGCCGCTTCGCCGACGCCGAGGCCGTCCTGCGCCGCGACATGAGCGCC
GAGGAGGCGGCCACGAACGTCGCGTCCCTGCGCCGGCTCGCGGCCCAGCCGAACCGGTCGAAGGCGCTGTCCGGCGCGGG
CGCGCCGGGGCAGGGGTGA

Upstream 100 bases:

>100_bases
GCGGCTTAACCGGTGATTAGGGTTAACGCTCTATCACCGGCCGGCCGGGAGCGTGAAGCGCGTGCCATCGCGTCCGGTCC
AGATGCCGGCGGAGCGCACC

Downstream 100 bases:

>100_bases
TCGGCGACCCGACGGCCGGCCGCGCCGTCATTCCAGGGGGCCGAAGGCGAGGCCGGAGGCCAGGACCAGCGTCGCAGCCG
GATCGCCCCGCGCCGGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Pilus Assembly Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Signal Peptide; Flp Pilus Assembly Protein TadD; Tetratricopeptide-Repeat Containing Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQDVDRLAERFNADPADGRTAMA
YARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLVEAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQA
RAQGFYEAALKIRPNEPSLLSNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA
EEAATNVASLRRLAAQPNRSKALSGAGAPGQG

Sequences:

>Translated_272_residues
MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQDVDRLAERFNADPADGRTAMA
YARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLVEAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQA
RAQGFYEAALKIRPNEPSLLSNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA
EEAATNVASLRRLAAQPNRSKALSGAGAPGQG
>Mature_272_residues
MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQDVDRLAERFNADPADGRTAMA
YARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLVEAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQA
RAQGFYEAALKIRPNEPSLLSNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA
EEAATNVASLRRLAAQPNRSKALSGAGAPGQG

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28268; Mature: 28268

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH
VDRLAERFNADPADGRTAMAYARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQARAQGFYEAALKIRPNEPSLL
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHH
SNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA
HHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHCCCH
EEAATNVASLRRLAAQPNRSKALSGAGAPGQG
HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MMTALFRVTQSQARAGRRAALAAAVALGLAGCNTGSPETTGSIGPLGGPSAAAAAPSRQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH
VDRLAERFNADPADGRTAMAYARALRATDQISQASAVLQQAALRNPRDRALLGAYGKSLV
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EAGRFREAIDVLANAHTPANPDWRILSAQGSASAQLGEQARAQGFYEAALKIRPNEPSLL
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEECCCCCHHH
SNLGLSYALSRNLDQAEQTLRLAADQPGADARVRANLAMVLSLKGRFADAEAVLRRDMSA
HHCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHEEEEECCCCCCHHHHHHHHCCCH
EEAATNVASLRRLAAQPNRSKALSGAGAPGQG
HHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA