| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yfkF [H]
Identifier: 170749974
GI number: 170749974
Start: 3796530
End: 3797717
Strand: Direct
Name: yfkF [H]
Synonym: Mrad2831_3575
Alternate gene names: 170749974
Gene position: 3796530-3797717 (Clockwise)
Preceding gene: 170749973
Following gene: 170749975
Centisome position: 62.47
GC content: 74.83
Gene sequence:
>1188_bases GTGAGCGGTTCCAACGGATTGGAGCAGGAGCAGCGGCGCGGGATCAGCTCGGAGGAGGTGGCGGCGATCTCGGCGGCCGT GACCTGCGTCACCGTCGTCGGCATCGGCCTCAGCCTCTCGATCCCGCTCCTCTCGATCGAGATGGAGCGTCGCGGCGCCT CGAGCACGCTGATCGGGCTCAACACCGCGGTGGCGGGCATCGCCAGCATCTGCACGGTGCCGTTCGTGCCGCGCCTCGCC GCGCGGGTCGGCGTCGCCCCGCTGCTCGGGCTGGCGCTCCTCGTCGGGGCGGTCAGCCTCGCGCTGTTCCCGCTCCTGCC GGGCATCGCCCTGTGGTTCCCCCTGCGCTTCGTCTTCTCGGCGACGCTCGGCGCGCTGTTCGTCCTCTCCGAGTACTGGA TCAACGCCGCCGCCCCGCCGGAGCGGCGCGGTCTGGTGATGGGCATCTACGCCACCGTCCTGGCGGCGGGCTTCGCGGTC GGACCGCTGCTGCTGGCCCTGGTCGGCACCGAGGGGCTGGCGCCCTACGCGACGGGGGCCGCCCTCATGCTGGCCGGCGG CCTGCCCATCGCCCTGGCCCGCGGCCTGTCCCCGACGATCGAGACGGGCTCCGGCCGCGGCATCCTCGGCTACGTCCGGC TCGCCCCCGGCGCCCTGGCGGCGGCCCTGGCCTACGGGGCGGTGGAGACCGGCATCTTCGCCATCCTGCCGCTCTACGGC CTGCGCCTCGGCTACGACGCGCAGGGGGCGGCCGGCCTCGTCAGCCTGATCGCGCTGGGCAACGTCCTGTTCCAGATCCC GTTCGGCTGGCTCGCCGACCGCCTCGACCGGGGCGCGGTGCTCCTCGGCGCGGGCCTCGCGGGCGCCGCGGGCTCGGCCC TGATCCCCCTCGCGGCCGGCCATCCGGCGGCGTTCGGTCTGCTCCTCCTCGTCTGGGGCGGCATCGCCGGCACCCTCTAC ACGGTCGGCCTCGCGATGCTGGGCGACCGCACGCCGCTGAACGACCTCGCGGGCGCCAACGCGGCCTTCGTGGTGCTCTA CAATGTCGGCCTGATGCTGGGACCGCCGGTGATCGGCGGCGGGCTCGACCTCGTGCCGCCGAACGGGTTCGCGCTGGCGC TGCTCGCCCTGTTCCTGGCCTTCGCCGGCTGGCTCGCCGCGACGGAGCGCCGACGCGCCCGCTCTTGA
Upstream 100 bases:
>100_bases TCCTGGACGATCTGGAGGCGCAGATCGCCGCCGATTTCGCGCCCTACCGGATGATCCCCTTCCACTACGAGCGCTACGGG CGGCGCGAGCGGGTGGCCTT
Downstream 100 bases:
>100_bases CCTGCCGGGCCCGATCGGGCATTCACCCGCCCGTATTCGGCCGGGCCCTCCCGGCCATTTGCGTTTCGCTCACGCGGAAT GCCGCACCCTGCAGGAGCGC
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSGSNGLEQEQRRGISSEEVAAISAAVTCVTVVGIGLSLSIPLLSIEMERRGASSTLIGLNTAVAGIASICTVPFVPRLA ARVGVAPLLGLALLVGAVSLALFPLLPGIALWFPLRFVFSATLGALFVLSEYWINAAAPPERRGLVMGIYATVLAAGFAV GPLLLALVGTEGLAPYATGAALMLAGGLPIALARGLSPTIETGSGRGILGYVRLAPGALAAALAYGAVETGIFAILPLYG LRLGYDAQGAAGLVSLIALGNVLFQIPFGWLADRLDRGAVLLGAGLAGAAGSALIPLAAGHPAAFGLLLLVWGGIAGTLY TVGLAMLGDRTPLNDLAGANAAFVVLYNVGLMLGPPVIGGGLDLVPPNGFALALLALFLAFAGWLAATERRRARS
Sequences:
>Translated_395_residues MSGSNGLEQEQRRGISSEEVAAISAAVTCVTVVGIGLSLSIPLLSIEMERRGASSTLIGLNTAVAGIASICTVPFVPRLA ARVGVAPLLGLALLVGAVSLALFPLLPGIALWFPLRFVFSATLGALFVLSEYWINAAAPPERRGLVMGIYATVLAAGFAV GPLLLALVGTEGLAPYATGAALMLAGGLPIALARGLSPTIETGSGRGILGYVRLAPGALAAALAYGAVETGIFAILPLYG LRLGYDAQGAAGLVSLIALGNVLFQIPFGWLADRLDRGAVLLGAGLAGAAGSALIPLAAGHPAAFGLLLLVWGGIAGTLY TVGLAMLGDRTPLNDLAGANAAFVVLYNVGLMLGPPVIGGGLDLVPPNGFALALLALFLAFAGWLAATERRRARS >Mature_394_residues SGSNGLEQEQRRGISSEEVAAISAAVTCVTVVGIGLSLSIPLLSIEMERRGASSTLIGLNTAVAGIASICTVPFVPRLAA RVGVAPLLGLALLVGAVSLALFPLLPGIALWFPLRFVFSATLGALFVLSEYWINAAAPPERRGLVMGIYATVLAAGFAVG PLLLALVGTEGLAPYATGAALMLAGGLPIALARGLSPTIETGSGRGILGYVRLAPGALAAALAYGAVETGIFAILPLYGL RLGYDAQGAAGLVSLIALGNVLFQIPFGWLADRLDRGAVLLGAGLAGAAGSALIPLAAGHPAAFGLLLLVWGGIAGTLYT VGLAMLGDRTPLNDLAGANAAFVVLYNVGLMLGPPVIGGGLDLVPPNGFALALLALFLAFAGWLAATERRRARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787126, Length=280, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 39762; Mature: 39630
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSNGLEQEQRRGISSEEVAAISAAVTCVTVVGIGLSLSIPLLSIEMERRGASSTLIGL CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEHHCCCCCEEEEH NTAVAGIASICTVPFVPRLAARVGVAPLLGLALLVGAVSLALFPLLPGIALWFPLRFVFS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLGALFVLSEYWINAAAPPERRGLVMGIYATVLAAGFAVGPLLLALVGTEGLAPYATGA HHHHHHHHHHHHHHCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCH ALMLAGGLPIALARGLSPTIETGSGRGILGYVRLAPGALAAALAYGAVETGIFAILPLYG HHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LRLGYDAQGAAGLVSLIALGNVLFQIPFGWLADRLDRGAVLLGAGLAGAAGSALIPLAAG HHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCC HPAAFGLLLLVWGGIAGTLYTVGLAMLGDRTPLNDLAGANAAFVVLYNVGLMLGPPVIGG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHEEHHHHHHCCCCCCC GLDLVPPNGFALALLALFLAFAGWLAATERRRARS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGSNGLEQEQRRGISSEEVAAISAAVTCVTVVGIGLSLSIPLLSIEMERRGASSTLIGL CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEHHCCCCCEEEEH NTAVAGIASICTVPFVPRLAARVGVAPLLGLALLVGAVSLALFPLLPGIALWFPLRFVFS HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLGALFVLSEYWINAAAPPERRGLVMGIYATVLAAGFAVGPLLLALVGTEGLAPYATGA HHHHHHHHHHHHHHCCCCCCHHCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCH ALMLAGGLPIALARGLSPTIETGSGRGILGYVRLAPGALAAALAYGAVETGIFAILPLYG HHHHCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LRLGYDAQGAAGLVSLIALGNVLFQIPFGWLADRLDRGAVLLGAGLAGAAGSALIPLAAG HHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCEEEECCC HPAAFGLLLLVWGGIAGTLYTVGLAMLGDRTPLNDLAGANAAFVVLYNVGLMLGPPVIGG CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCEEEHEEHHHHHHCCCCCCC GLDLVPPNGFALALLALFLAFAGWLAATERRRARS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]