Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170749939

Identifier: 170749939

GI number: 170749939

Start: 3757454

End: 3758935

Strand: Reverse

Name: 170749939

Synonym: Mrad2831_3539

Alternate gene names: NA

Gene position: 3758935-3757454 (Counterclockwise)

Preceding gene: 170749940

Following gene: 170749938

Centisome position: 61.85

GC content: 73.68

Gene sequence:

>1482_bases
ATGGGGGCGGGGCACGCGCCGCGTCCCTCGCCCCGCGGTGACGGGGCGGATCCACGGTCGCCGCGCGCCGTCACGCTGCG
CCCCGGCGCCGATCTCGACGGTTTCCGCAAGGCCGTCCGGAGCCTCGTCGCGCAGGGCGTCGCGCCCGGAGCCGTGACGT
GGTCGGTGACGGACTCGCCCGGCCTGTTCAGCGGCGACGGGGAGCCGGCCGCCGGAGCGCCGCTCGTCCTGCCGAAGGCC
GTCGCCAGCCTGATCCCGCAGGTGATCCCTCACCGCGATCCGGAGCGCTACGGCCTGCTCTACGCGCTGGTCTGGCGGGT
CTGCCGCGGCGAGCGCCACCTGATGGAGGTCGGCAGCGACCCGCTGGTCCACCGCCTGCACCGGATGGCGAAGGCGATCG
GGCGCGACCTCCACAAGATGCACGCCTTCCTGCGCTTCCGCCGGGCGGAGGGACCGGACGGCGAGCGCTACGTCGCGTGG
TTCGAGCCGGACCACCACATCCTCGAGGCGGCGGCGCCGTTCTTCGTGAACCGCTTCCGCGGGATGCGCTGGTCGATCCT
GACCCCCGACGGATCCGCCCACTGGGACACCGAGACCCTGACCTTCGGGCCGGCCGGGGACCGGGCGCAGCTCCCCGAGG
GCGACGGCTTCGAGGCGGGCTGGCAGACCTACTACGAGAGCACGTTCAACCCGGCCCGCACCAACCTGAAGGCCATGCGG
GCGGAGATGCCCAAGAAGTACTGGCACAACATGCCCGAGACGGCCGCGATCCCCGCCCTGGTCCGGGCGGCGGCCGGGCG
CACCGTAGCCATGATCGAGAGGGAGCCGACCATGCCCACACGCCGCGAACCCGCCCGGGCCGTCGCCGCCATGGCCGACC
AGGATCCGAAGACCCTGGAGGAGCTGAACGCGATCATCCGCCGGACCGAGCCGCTGGTCCCCGGCGCCACCCAGGCCGTG
CTCGGCGAGGGCCCGGTCGGCGCAACGGTGGCCTTCGTGGGCGAGCAGCCCGGCGACCAGGAGGACCGGCAGGGCCGCCC
CTTCGTCGGGCCCGCCGGCCAGCTGCTCTCCCGCGCCATGGCCGAGGCCGGGATCGACCGGGGCGCGAGCTACCTGACGA
ACGCGGTCAAGCACTTCAAGTTCGAGGAGCGCGGCAAGCGCCGCATCCACCAGAAGCCGACCGCCGGCGAGGTCAGCCAC
TATCGGTGGTGGCTCGACCGGGAACTCGAATTCGTCGGCCCGAAGCTCGTGGTGGCGCTCGGCGCGACCGCCGTCCTGGC
GCTGACCGGCAAGGCGATCCCGATCACGCGGGCGCGCGGCCCGTTCCGCTTCGACCGGCACGACAACCGCTTCCAGGGCT
TCATCACGGTCCACCCGTCCTACCTGCTCCGGCTGCCGGACGAGGCGAAGGCGGAGGCCTACGCGGCCTTCGTGGACGAC
CTGCGCCGGGTGGAGGCGCTCGGGCGCGAGCTCGCGGCCTGA

Upstream 100 bases:

>100_bases
CGTTCCTCGTGGCCGCCGATCATCGCCCCGTCGCGCTCACGGACCGGCTCGACCTCCGGGCGCGGCTGGTCGAGCCCGCG
GCGCAGCTGAGCCTGTTCTG

Downstream 100 bases:

>100_bases
TCCTCCCCTGCCGCGGTTCTGCTATGCTGGCGGCCGCCGATTCTCTCCGGTCCCGCCGCCATGGACAAGCTCGCCGCCCT
CGACATCCTGCGCGCCAACG

Product: uracil-DNA glycosylase superfamily protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage SPO1 DNA Polymerase-Like Protein; Uracil DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; DNA Polymerase Bacteriophage-Type; DNA Polymerase; DNA-Directed DNA Polymerase Protein; Uracil-DNA Glycosylase Family 4 Protein; Uracil DNA Glycosylase; Phage Spo1 DNA Polymerase-Related Protein; Phage DNA Polymerase; DNA-Directed DNA Polymerase; DNA Polymerase-Related Protein; Uracil-DNA Glycosylase-Like Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; Helicase/Glycosylase; Uracil DNA Glycosylase Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Uracil DNA Glycosylase Superfamily; Phage SPO1 DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase C-Terminal Domain Protein; Uracil DNA Glycosylase Family Protein; Transcriptional Regulator Fis Family; N-Terminus Of Phage SPO1 DNA Polymerase; Fis Family Transcriptional Regulator; DNA Polymerase-Like Protein; Leucyl-TRNA Synthetase

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MGAGHAPRPSPRGDGADPRSPRAVTLRPGADLDGFRKAVRSLVAQGVAPGAVTWSVTDSPGLFSGDGEPAAGAPLVLPKA
VASLIPQVIPHRDPERYGLLYALVWRVCRGERHLMEVGSDPLVHRLHRMAKAIGRDLHKMHAFLRFRRAEGPDGERYVAW
FEPDHHILEAAAPFFVNRFRGMRWSILTPDGSAHWDTETLTFGPAGDRAQLPEGDGFEAGWQTYYESTFNPARTNLKAMR
AEMPKKYWHNMPETAAIPALVRAAAGRTVAMIEREPTMPTRREPARAVAAMADQDPKTLEELNAIIRRTEPLVPGATQAV
LGEGPVGATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAMAEAGIDRGASYLTNAVKHFKFEERGKRRIHQKPTAGEVSH
YRWWLDRELEFVGPKLVVALGATAVLALTGKAIPITRARGPFRFDRHDNRFQGFITVHPSYLLRLPDEAKAEAYAAFVDD
LRRVEALGRELAA

Sequences:

>Translated_493_residues
MGAGHAPRPSPRGDGADPRSPRAVTLRPGADLDGFRKAVRSLVAQGVAPGAVTWSVTDSPGLFSGDGEPAAGAPLVLPKA
VASLIPQVIPHRDPERYGLLYALVWRVCRGERHLMEVGSDPLVHRLHRMAKAIGRDLHKMHAFLRFRRAEGPDGERYVAW
FEPDHHILEAAAPFFVNRFRGMRWSILTPDGSAHWDTETLTFGPAGDRAQLPEGDGFEAGWQTYYESTFNPARTNLKAMR
AEMPKKYWHNMPETAAIPALVRAAAGRTVAMIEREPTMPTRREPARAVAAMADQDPKTLEELNAIIRRTEPLVPGATQAV
LGEGPVGATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAMAEAGIDRGASYLTNAVKHFKFEERGKRRIHQKPTAGEVSH
YRWWLDRELEFVGPKLVVALGATAVLALTGKAIPITRARGPFRFDRHDNRFQGFITVHPSYLLRLPDEAKAEAYAAFVDD
LRRVEALGRELAA
>Mature_492_residues
GAGHAPRPSPRGDGADPRSPRAVTLRPGADLDGFRKAVRSLVAQGVAPGAVTWSVTDSPGLFSGDGEPAAGAPLVLPKAV
ASLIPQVIPHRDPERYGLLYALVWRVCRGERHLMEVGSDPLVHRLHRMAKAIGRDLHKMHAFLRFRRAEGPDGERYVAWF
EPDHHILEAAAPFFVNRFRGMRWSILTPDGSAHWDTETLTFGPAGDRAQLPEGDGFEAGWQTYYESTFNPARTNLKAMRA
EMPKKYWHNMPETAAIPALVRAAAGRTVAMIEREPTMPTRREPARAVAAMADQDPKTLEELNAIIRRTEPLVPGATQAVL
GEGPVGATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAMAEAGIDRGASYLTNAVKHFKFEERGKRRIHQKPTAGEVSHY
RWWLDRELEFVGPKLVVALGATAVLALTGKAIPITRARGPFRFDRHDNRFQGFITVHPSYLLRLPDEAKAEAYAAFVDDL
RRVEALGRELAA

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 54263; Mature: 54132

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGHAPRPSPRGDGADPRSPRAVTLRPGADLDGFRKAVRSLVAQGVAPGAVTWSVTDSP
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GLFSGDGEPAAGAPLVLPKAVASLIPQVIPHRDPERYGLLYALVWRVCRGERHLMEVGSD
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCC
PLVHRLHRMAKAIGRDLHKMHAFLRFRRAEGPDGERYVAWFEPDHHILEAAAPFFVNRFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC
GMRWSILTPDGSAHWDTETLTFGPAGDRAQLPEGDGFEAGWQTYYESTFNPARTNLKAMR
CCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
AEMPKKYWHNMPETAAIPALVRAAAGRTVAMIEREPTMPTRREPARAVAAMADQDPKTLE
HHCCHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHH
ELNAIIRRTEPLVPGATQAVLGEGPVGATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAM
HHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
AEAGIDRGASYLTNAVKHFKFEERGKRRIHQKPTAGEVSHYRWWLDRELEFVGPKLVVAL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHH
GATAVLALTGKAIPITRARGPFRFDRHDNRFQGFITVHPSYLLRLPDEAKAEAYAAFVDD
HHHHEEHCCCCCCEEECCCCCCCCCCCCCCEEEEEEECHHHEEECCCHHHHHHHHHHHHH
LRRVEALGRELAA
HHHHHHHHHHHCC
>Mature Secondary Structure 
GAGHAPRPSPRGDGADPRSPRAVTLRPGADLDGFRKAVRSLVAQGVAPGAVTWSVTDSP
CCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
GLFSGDGEPAAGAPLVLPKAVASLIPQVIPHRDPERYGLLYALVWRVCRGERHLMEVGSD
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCC
PLVHRLHRMAKAIGRDLHKMHAFLRFRRAEGPDGERYVAWFEPDHHILEAAAPFFVNRFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC
GMRWSILTPDGSAHWDTETLTFGPAGDRAQLPEGDGFEAGWQTYYESTFNPARTNLKAMR
CCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
AEMPKKYWHNMPETAAIPALVRAAAGRTVAMIEREPTMPTRREPARAVAAMADQDPKTLE
HHCCHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHH
ELNAIIRRTEPLVPGATQAVLGEGPVGATVAFVGEQPGDQEDRQGRPFVGPAGQLLSRAM
HHHHHHHHCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
AEAGIDRGASYLTNAVKHFKFEERGKRRIHQKPTAGEVSHYRWWLDRELEFVGPKLVVAL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCHHHHHH
GATAVLALTGKAIPITRARGPFRFDRHDNRFQGFITVHPSYLLRLPDEAKAEAYAAFVDD
HHHHEEHCCCCCCEEECCCCCCCCCCCCCCEEEEEEECHHHEEECCCHHHHHHHHHHHHH
LRRVEALGRELAA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA