| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is glsA
Identifier: 170749929
GI number: 170749929
Start: 3744249
End: 3745178
Strand: Direct
Name: glsA
Synonym: Mrad2831_3529
Alternate gene names: 170749929
Gene position: 3744249-3745178 (Clockwise)
Preceding gene: 170749928
Following gene: 170749930
Centisome position: 61.6
GC content: 69.68
Gene sequence:
>930_bases GTGCCCGACCTTGCCCACGTCATCCGGGAGATCTCCGAGGAGATGGCCCAGCGCTCCGACCGGGGCGCGGTCGCGGACTA CATCCCCGAGCTCGCCCGGGTCGATCCCGACCAGTTCGGCATGGCGGTGATCGACGCCGAGGGACAGGTCTTCACCGGCG GCGACAGCGAGACGCCGTTCTCGATCCAGAGCGTGTCGAAGGTGTTCACGCTCACCCTCGCCCTCGGCATGGTCGGCGAC CGGCTCTGGAAGCGCGTCGGCCGCGAGCCCTCGGGCAACCCGTTCAATTCCATCGTCCAGCTGGAGCGGGAGCGCGGCGT GCCGCGCAACCCGTTCATCAACGCGGGCGCGATCGCGGTCACCGACGTGATCCTCTCGGGTCACGAGCCCCGCGAGGCGC TGGGCGAGATCCTGCGCTTCATGCAGTTCCTGGCCCAGGATTCCGGCATCATCATCGACGAGACGGTGGCGGCCTCGGAG AAGCGCACGGGCTTCCGCAACACCGCGCTCGCCAACTACATGAAGTCGTTCGGGGTCATCGACAATCCGGTCGACTACAC GCTCGGCGTCTACTTCCATCACTGCGCCATCGCGATGAACTGCCGCCAGCTCGCGCGGGCCGGCCGGTTCCTGGCGCATA ACGGCGTCAACCCGTCGACCGGCCACTCGGTGGTCTCGGCGGAGCGCGCGCGCCGCATCAACGCGATCATGCTGACCTGC GGCCACTACGACGGGTCGGGCGAGTTCGCCTACCGCGTGGGCCTGCCGGGCAAGAGCGGGGTCGGCGGCAGCATCCTGGC GATCGCGCCCGGCAAGGCGTCCATCGCCGTCTGGTCGCCCGGCCTCGACGCGGCGGGCAATTCCCACCTCGGCCGCATCG CCCTGGAGCGGCTCACGCAGCGCATGGGCTGGTCCGTCTTCGGCGCGTGA
Upstream 100 bases:
>100_bases CGGCGCTGCTAGATCACCGCCGGGCCGGACCGGACCTTGCATCGCCTGAGACGTCGCGAACCGGCCCGGTTCCGACGCAA CGCGACGCCCGAGCCCGACC
Downstream 100 bases:
>100_bases GGGTCGCCTCCCGGCCGGCGTCGCGCCCCCTTGCGCGGCGCGCGCTTCCGCGGCACTGCGCCGGCGGGGCGCCGCGGCGC CGAGACGAGGCTCATCGGCA
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPDLAHVIREISEEMAQRSDRGAVADYIPELARVDPDQFGMAVIDAEGQVFTGGDSETPFSIQSVSKVFTLTLALGMVGD RLWKRVGREPSGNPFNSIVQLERERGVPRNPFINAGAIAVTDVILSGHEPREALGEILRFMQFLAQDSGIIIDETVAASE KRTGFRNTALANYMKSFGVIDNPVDYTLGVYFHHCAIAMNCRQLARAGRFLAHNGVNPSTGHSVVSAERARRINAIMLTC GHYDGSGEFAYRVGLPGKSGVGGSILAIAPGKASIAVWSPGLDAAGNSHLGRIALERLTQRMGWSVFGA
Sequences:
>Translated_309_residues MPDLAHVIREISEEMAQRSDRGAVADYIPELARVDPDQFGMAVIDAEGQVFTGGDSETPFSIQSVSKVFTLTLALGMVGD RLWKRVGREPSGNPFNSIVQLERERGVPRNPFINAGAIAVTDVILSGHEPREALGEILRFMQFLAQDSGIIIDETVAASE KRTGFRNTALANYMKSFGVIDNPVDYTLGVYFHHCAIAMNCRQLARAGRFLAHNGVNPSTGHSVVSAERARRINAIMLTC GHYDGSGEFAYRVGLPGKSGVGGSILAIAPGKASIAVWSPGLDAAGNSHLGRIALERLTQRMGWSVFGA >Mature_308_residues PDLAHVIREISEEMAQRSDRGAVADYIPELARVDPDQFGMAVIDAEGQVFTGGDSETPFSIQSVSKVFTLTLALGMVGDR LWKRVGREPSGNPFNSIVQLERERGVPRNPFINAGAIAVTDVILSGHEPREALGEILRFMQFLAQDSGIIIDETVAASEK RTGFRNTALANYMKSFGVIDNPVDYTLGVYFHHCAIAMNCRQLARAGRFLAHNGVNPSTGHSVVSAERARRINAIMLTCG HYDGSGEFAYRVGLPGKSGVGGSILAIAPGKASIAVWSPGLDAAGNSHLGRIALERLTQRMGWSVFGA
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family
Homologues:
Organism=Homo sapiens, GI156104878, Length=293, Percent_Identity=37.2013651877133, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI20336214, Length=280, Percent_Identity=37.1428571428571, Blast_Score=189, Evalue=2e-48, Organism=Escherichia coli, GI1787804, Length=307, Percent_Identity=48.5342019543974, Blast_Score=272, Evalue=2e-74, Organism=Escherichia coli, GI1786693, Length=287, Percent_Identity=41.4634146341463, Blast_Score=196, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507019, Length=318, Percent_Identity=38.0503144654088, Blast_Score=194, Evalue=5e-50, Organism=Caenorhabditis elegans, GI193204073, Length=304, Percent_Identity=36.1842105263158, Blast_Score=187, Evalue=6e-48, Organism=Caenorhabditis elegans, GI193204075, Length=306, Percent_Identity=35.6209150326797, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17532727, Length=287, Percent_Identity=34.4947735191638, Blast_Score=172, Evalue=1e-43, Organism=Drosophila melanogaster, GI281363241, Length=314, Percent_Identity=35.3503184713376, Blast_Score=187, Evalue=9e-48, Organism=Drosophila melanogaster, GI24653164, Length=314, Percent_Identity=35.3503184713376, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24653162, Length=314, Percent_Identity=35.3503184713376, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24653156, Length=308, Percent_Identity=36.038961038961, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI281363239, Length=314, Percent_Identity=35.3503184713376, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI24653166, Length=308, Percent_Identity=36.038961038961, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24653158, Length=308, Percent_Identity=36.038961038961, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI116008307, Length=308, Percent_Identity=36.038961038961, Blast_Score=186, Evalue=2e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLSA_METRJ (B1LUS0)
Other databases:
- EMBL: CP001001 - RefSeq: YP_001756189.1 - ProteinModelPortal: B1LUS0 - SMR: B1LUS0 - GeneID: 6139582 - GenomeReviews: CP001001_GR - KEGG: mrd:Mrad2831_3529 - HOGENOM: HBG512335 - OMA: NALMLTC - ProtClustDB: PRK00971 - HAMAP: MF_00313 - InterPro: IPR012338 - InterPro: IPR015868 - Gene3D: G3DSA:3.40.710.20 - PANTHER: PTHR12544 - TIGRFAMs: TIGR03814
Pfam domain/function: PF04960 Glutaminase; SSF56601 PBP_transp_fold
EC number: =3.5.1.2
Molecular weight: Translated: 33255; Mature: 33124
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLAHVIREISEEMAQRSDRGAVADYIPELARVDPDQFGMAVIDAEGQVFTGGDSETPF CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCEEEEECCCCEEECCCCCCCC SIQSVSKVFTLTLALGMVGDRLWKRVGREPSGNPFNSIVQLERERGVPRNPFINAGAIAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH TDVILSGHEPREALGEILRFMQFLAQDSGIIIDETVAASEKRTGFRNTALANYMKSFGVI HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCHHHHHHHHHHHCCCC DNPVDYTLGVYFHHCAIAMNCRQLARAGRFLAHNGVNPSTGHSVVSAERARRINAIMLTC CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHCEEEEEEE GHYDGSGEFAYRVGLPGKSGVGGSILAIAPGKASIAVWSPGLDAAGNSHLGRIALERLTQ CCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH RMGWSVFGA HHCCHHCCC >Mature Secondary Structure PDLAHVIREISEEMAQRSDRGAVADYIPELARVDPDQFGMAVIDAEGQVFTGGDSETPF CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCEEEEECCCCEEECCCCCCCC SIQSVSKVFTLTLALGMVGDRLWKRVGREPSGNPFNSIVQLERERGVPRNPFINAGAIAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHH TDVILSGHEPREALGEILRFMQFLAQDSGIIIDETVAASEKRTGFRNTALANYMKSFGVI HHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCHHHHHHHHHHHCCCC DNPVDYTLGVYFHHCAIAMNCRQLARAGRFLAHNGVNPSTGHSVVSAERARRINAIMLTC CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHHCEEEEEEE GHYDGSGEFAYRVGLPGKSGVGGSILAIAPGKASIAVWSPGLDAAGNSHLGRIALERLTQ CCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH RMGWSVFGA HHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA