| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yebE [H]
Identifier: 170749876
GI number: 170749876
Start: 3688940
End: 3689452
Strand: Reverse
Name: yebE [H]
Synonym: Mrad2831_3476
Alternate gene names: 170749876
Gene position: 3689452-3688940 (Counterclockwise)
Preceding gene: 170749877
Following gene: 170749875
Centisome position: 60.7
GC content: 75.44
Gene sequence:
>513_bases ATGGCTGACAGCAGACGGATCGTCGACGCGCTGGTGCGTTCGAGGCGCGGCGGCCTCGCCGCCGGTGCCGCCCTCTGCGG GCTGGCGCTGATCGGCAGCCTCGCCTACCGGGCATTGCGCGGGGCGGCGCCGCCCGAGGCCGGCGGGCCGGACTTCACGC AGGTCGCCGAGGACGAGGCCCGGCTGATGCTGCGGGCCATGGTGGCGGCCACGACGGCCGACGGGATGGTCGACGCCGCG GAGCGCAAACGCCTCGACGCGGCCGTGGCGGAGGCGGGCCTCGATCCCGATGGCCGGTCCTGGCTCGACCGCGAACTCGC GGATCCCGCCGACGTCGACGCGATCGCCGAGCGGGTCGCGAGTCCGGACGCGGCGGCGCGGATCTTCGCGGCGGCGCGGC TCGCGATCGATCCCGACACGCTCCAGGAGCGTCAGTTCCTGAAGATGCTGGCCGAGGCCCTCGACCTGCCCGCGGAGACG ACCGAGCGGGTCGAGCGCGACATCGCGGCCTGA
Upstream 100 bases:
>100_bases GGACGAGGACGAGGATGAGGCCGGCGCCTGAGCGCGGCTGAACCCGAGCGCCTCCCGGGTGGTTTCCGATCCGATCTGGA TCGGATCCCGGGAGGACGGC
Downstream 100 bases:
>100_bases GCGGCAACCTGTCCGATGGGTGGATCCTCCACGGCGGCCGAGCTTCGTGCTAGGCTTCCCCGCGACGACGGGTCCGGGCG ATCCGTCCGCGGGAGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MADSRRIVDALVRSRRGGLAAGAALCGLALIGSLAYRALRGAAPPEAGGPDFTQVAEDEARLMLRAMVAATTADGMVDAA ERKRLDAAVAEAGLDPDGRSWLDRELADPADVDAIAERVASPDAAARIFAAARLAIDPDTLQERQFLKMLAEALDLPAET TERVERDIAA
Sequences:
>Translated_170_residues MADSRRIVDALVRSRRGGLAAGAALCGLALIGSLAYRALRGAAPPEAGGPDFTQVAEDEARLMLRAMVAATTADGMVDAA ERKRLDAAVAEAGLDPDGRSWLDRELADPADVDAIAERVASPDAAARIFAAARLAIDPDTLQERQFLKMLAEALDLPAET TERVERDIAA >Mature_169_residues ADSRRIVDALVRSRRGGLAAGAALCGLALIGSLAYRALRGAAPPEAGGPDFTQVAEDEARLMLRAMVAATTADGMVDAAE RKRLDAAVAEAGLDPDGRSWLDRELADPADVDAIAERVASPDAAARIFAAARLAIDPDTLQERQFLKMLAEALDLPAETT ERVERDIAA
Specific function: Unknown
COG id: COG2979
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788151, Length=151, Percent_Identity=32.4503311258278, Blast_Score=67, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007486 [H]
Pfam domain/function: PF04391 DUF533 [H]
EC number: NA
Molecular weight: Translated: 17879; Mature: 17748
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSRRIVDALVRSRRGGLAAGAALCGLALIGSLAYRALRGAAPPEAGGPDFTQVAEDEA CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH RLMLRAMVAATTADGMVDAAERKRLDAAVAEAGLDPDGRSWLDRELADPADVDAIAERVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHC SPDAAARIFAAARLAIDPDTLQERQFLKMLAEALDLPAETTERVERDIAA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure ADSRRIVDALVRSRRGGLAAGAALCGLALIGSLAYRALRGAAPPEAGGPDFTQVAEDEA CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH RLMLRAMVAATTADGMVDAAERKRLDAAVAEAGLDPDGRSWLDRELADPADVDAIAERVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHC SPDAAARIFAAARLAIDPDTLQERQFLKMLAEALDLPAETTERVERDIAA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]