| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is era [H]
Identifier: 170749854
GI number: 170749854
Start: 3668970
End: 3669968
Strand: Reverse
Name: era [H]
Synonym: Mrad2831_3454
Alternate gene names: 170749854
Gene position: 3669968-3668970 (Counterclockwise)
Preceding gene: 170749855
Following gene: 170749853
Centisome position: 60.38
GC content: 71.97
Gene sequence:
>999_bases ATGAGCGCGCACGAGCAGGACGATCACGACGAGCGGGACGGGCCCGACAGCGCGCCGGCCCGGGAGCCCGCGCGCGACCC GTCCACCCTTCCCGGCACGCCCGCCGACGCGCGGGCCGGCTTCGTGGCGCTGATCGGCGTGCCGAATGCCGGCAAGTCGA CCCTGCTCAACAACCTCGTCGGCACCAAGGTCTCGATCGTCTCGCGCAAGGTGCAGACGACCCGGGCCCTGGTGCGGGGC ATCCTCATCGAGGGGTCGGCCCAGGTCGTCCTGGTCGACACCCCCGGCATCTTCGCGCCCAAGCGCCGCCTCGACCGCGC GATGGTGCACTCGGCCTGGAGCGGCGCCGCCGACGCCGACGCCGTCTGCCTGCTGGTCGACGCGCGCAAGGGCGTCGACG CGGAGGTGGAGGCGGTGCTCGGCCGGCTCGGCGAGGTGAAGCGCGAGAAGCTGCTGATCCTCAACAAGATCGACCTGATC CCGCGCGAGCGGCTCCTCGATCTCGCCGCGAAGCTCAACGCCGCCGCGCCCTTCGCCGAGACCTTCATGATCTCGGCGCT GAACGGCGACGGCGTCGCCGACCTGCGCCGGGCGCTGGCCGCCCGCATGCCGCCGGGGCCCTGGCTCTATCCGGAGGATC AGGTCTCGGACGCGCCCCTGCGCATGCTCGCCGCCGAGATCACCCGCGAGAAGATCTACGACCGGCTGCACGAGGAGCTG CCCTACCGCTCCACGGTGGAGACCGACCAGTGGCAGATCCGGCCCGACGGCTCCGTGCGGATCGAGCAGACGATCTTCGT CGAGCGGGAGAGCCAGCGCTCGATCGTGCTCGGCAAGGGCGGCCAGACCATCCGGTCGATCGGGCAGGCGGCCCGGATCG AGATCGCCGAGGCGGCCGACGCCAAGGTCCACCTGTTCCTGCACGTGAAGGTGCGGGAGAACTGGGCCGACGATCCGGCC CGCTACCGCGAGATGGGCCTGGAATTCCCGCGGGGCTGA
Upstream 100 bases:
>100_bases ACGGCACGTCGAAGCGGATCGCCGAGCAGGCCGCCGCCCGGGCGCTGATGGAGCGGGAGGGAATCGGGGCCTCCGCGGAT GCGGAGCCGACGGAGACAGC
Downstream 100 bases:
>100_bases CGCGCCGGGTCGCGCGCGGGAGGCTGGGCTTCCCGGCGGGTTCCGGTATAAACGCGGTGTTCCCCCCGGATGAACCGAGT CGGGCGCGGGTTTACCCCGC
Product: GTP-binding protein Era
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSAHEQDDHDERDGPDSAPAREPARDPSTLPGTPADARAGFVALIGVPNAGKSTLLNNLVGTKVSIVSRKVQTTRALVRG ILIEGSAQVVLVDTPGIFAPKRRLDRAMVHSAWSGAADADAVCLLVDARKGVDAEVEAVLGRLGEVKREKLLILNKIDLI PRERLLDLAAKLNAAAPFAETFMISALNGDGVADLRRALAARMPPGPWLYPEDQVSDAPLRMLAAEITREKIYDRLHEEL PYRSTVETDQWQIRPDGSVRIEQTIFVERESQRSIVLGKGGQTIRSIGQAARIEIAEAADAKVHLFLHVKVRENWADDPA RYREMGLEFPRG
Sequences:
>Translated_332_residues MSAHEQDDHDERDGPDSAPAREPARDPSTLPGTPADARAGFVALIGVPNAGKSTLLNNLVGTKVSIVSRKVQTTRALVRG ILIEGSAQVVLVDTPGIFAPKRRLDRAMVHSAWSGAADADAVCLLVDARKGVDAEVEAVLGRLGEVKREKLLILNKIDLI PRERLLDLAAKLNAAAPFAETFMISALNGDGVADLRRALAARMPPGPWLYPEDQVSDAPLRMLAAEITREKIYDRLHEEL PYRSTVETDQWQIRPDGSVRIEQTIFVERESQRSIVLGKGGQTIRSIGQAARIEIAEAADAKVHLFLHVKVRENWADDPA RYREMGLEFPRG >Mature_331_residues SAHEQDDHDERDGPDSAPAREPARDPSTLPGTPADARAGFVALIGVPNAGKSTLLNNLVGTKVSIVSRKVQTTRALVRGI LIEGSAQVVLVDTPGIFAPKRRLDRAMVHSAWSGAADADAVCLLVDARKGVDAEVEAVLGRLGEVKREKLLILNKIDLIP RERLLDLAAKLNAAAPFAETFMISALNGDGVADLRRALAARMPPGPWLYPEDQVSDAPLRMLAAEITREKIYDRLHEELP YRSTVETDQWQIRPDGSVRIEQTIFVERESQRSIVLGKGGQTIRSIGQAARIEIAEAADAKVHLFLHVKVRENWADDPAR YREMGLEFPRG
Specific function: An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism [H]
COG id: COG1159
COG function: function code R; GTPase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH type-2 domain [H]
Homologues:
Organism=Homo sapiens, GI24307899, Length=333, Percent_Identity=30.3303303303303, Blast_Score=138, Evalue=7e-33, Organism=Escherichia coli, GI1788919, Length=298, Percent_Identity=38.9261744966443, Blast_Score=186, Evalue=2e-48, Organism=Escherichia coli, GI87082120, Length=176, Percent_Identity=29.5454545454545, Blast_Score=67, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646434, Length=339, Percent_Identity=27.7286135693215, Blast_Score=114, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005662 - InterPro: IPR015946 - InterPro: IPR009019 - InterPro: IPR004044 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07650 KH_2; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 36360; Mature: 36229
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS50823 KH_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHEQDDHDERDGPDSAPAREPARDPSTLPGTPADARAGFVALIGVPNAGKSTLLNNLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH GTKVSIVSRKVQTTRALVRGILIEGSAQVVLVDTPGIFAPKRRLDRAMVHSAWSGAADAD CCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC AVCLLVDARKGVDAEVEAVLGRLGEVKREKLLILNKIDLIPRERLLDLAAKLNAAAPFAE EEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHCCCCCHHH TFMISALNGDGVADLRRALAARMPPGPWLYPEDQVSDAPLRMLAAEITREKIYDRLHEEL HHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PYRSTVETDQWQIRPDGSVRIEQTIFVERESQRSIVLGKGGQTIRSIGQAARIEIAEAAD CCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHEEEEECCCC AKVHLFLHVKVRENWADDPARYREMGLEFPRG CEEEEEEEEEEECCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure SAHEQDDHDERDGPDSAPAREPARDPSTLPGTPADARAGFVALIGVPNAGKSTLLNNLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHH GTKVSIVSRKVQTTRALVRGILIEGSAQVVLVDTPGIFAPKRRLDRAMVHSAWSGAADAD CCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCC AVCLLVDARKGVDAEVEAVLGRLGEVKREKLLILNKIDLIPRERLLDLAAKLNAAAPFAE EEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHCCCCCHHH TFMISALNGDGVADLRRALAARMPPGPWLYPEDQVSDAPLRMLAAEITREKIYDRLHEEL HHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PYRSTVETDQWQIRPDGSVRIEQTIFVERESQRSIVLGKGGQTIRSIGQAARIEIAEAAD CCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHEEEEECCCC AKVHLFLHVKVRENWADDPARYREMGLEFPRG CEEEEEEEEEEECCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA