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The map label for this gene is rsmC [H]

Identifier: 170749853

GI number: 170749853

Start: 3667913

End: 3668818

Strand: Reverse

Name: rsmC [H]

Synonym: Mrad2831_3453

Alternate gene names: 170749853

Gene position: 3668818-3667913 (Counterclockwise)

Preceding gene: 170749854

Following gene: 170749852

Centisome position: 60.36

GC content: 75.17

Gene sequence:

>906_bases
ATGCGCCATGCCGTCTACGGCCTGCCGCCGGTGGACCTCGCCGAGGTCCCGGGCGACGCCGTCCAGCTCTCCCCGTTGAT
TCCCGGCGCCGCGCGGCTGGAGGACCTGTCCGAGAACAGCCTCGACGCGGCCACCGTGCTGGCGCCGCCCGGAACGGTCG
AGCGGCGCTACGTGCTGGCCCAGGTGCTGCGCGCCCTCGGGCCCGGCGGCCGCATGGTCGCCTTGGCGCCCAAGGATCGC
GGCGGAACCCGCCTGGCCAAGGAACTGACGACCTTCGGCTGCGCCGCCGCCGACCAGCCGCGCCGGCATCACCGGATCTG
CACGGCGGAGCGCCCGACCGACCTCGCCGGCGTCGCCGAGGCGATCGACGAGGGCGGCCCGCGCCACGTCGACAACCTCG
CCCTGTGCACGCAGCCCGGCATCTTCTCGTGGGACCGGCTCGATCCCGGCACGGCGCTGCTCCTGGCGAACCTCCCCGCC
CTCAAGGGCCGCGGCGCCGATTTCGGCTGCGGCCTCGGGATCCTGTCGCGGGCCGTCCTGGGGTCCGAGGCCGTGACCGC
CCTGACCCTGCTGGAGATCGATCGGCGCGCCGTCGAGATGGCGCGCCGCAACGTCGCCGATCCGCGCGCGACGATCCTCT
GGGCCGATATCCGCGCGTCCGGCGCGGTGCCGGAAAACCTCGACTTCGTCGTCACGAACCCGCCGTTCCACGAGGGCGGG
AGCGAGGATCAGGCGCTCGGCCGGGCGTTCATCGCGCGGGCGGCCGAGGCCCTGCGCCCCGGGGGGGCGCTGTGGCTCGT
CGCCAACGCGCACCTGCCCTACGAGGCGAGCCTGCGCGAGGCGTTCCGGCACGTCGCGGTGGCCGTCCAGGCGAACGGCT
ACCGGGTCTACGAGGCCCGCCGGTGA

Upstream 100 bases:

>100_bases
ACGCGGTGTTCCCCCCGGATGAACCGAGTCGGGCGCGGGTTTACCCCGCTCCGCCGCGGATTCGCGTTCCGGATTCGGCA
CTCCAAATCCCGAATTGTCT

Downstream 100 bases:

>100_bases
GGGCGCCGCTTCCATGAGCGCGGCGAGATCCGTCCGCCTGGACAAGCTCCTCGCCAATCTCGGCTACGGCTCGCGCCGCG
AGATCCAGGCCCTCGCCCGC

Product: methyltransferase small

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MRHAVYGLPPVDLAEVPGDAVQLSPLIPGAARLEDLSENSLDAATVLAPPGTVERRYVLAQVLRALGPGGRMVALAPKDR
GGTRLAKELTTFGCAAADQPRRHHRICTAERPTDLAGVAEAIDEGGPRHVDNLALCTQPGIFSWDRLDPGTALLLANLPA
LKGRGADFGCGLGILSRAVLGSEAVTALTLLEIDRRAVEMARRNVADPRATILWADIRASGAVPENLDFVVTNPPFHEGG
SEDQALGRAFIARAAEALRPGGALWLVANAHLPYEASLREAFRHVAVAVQANGYRVYEARR

Sequences:

>Translated_301_residues
MRHAVYGLPPVDLAEVPGDAVQLSPLIPGAARLEDLSENSLDAATVLAPPGTVERRYVLAQVLRALGPGGRMVALAPKDR
GGTRLAKELTTFGCAAADQPRRHHRICTAERPTDLAGVAEAIDEGGPRHVDNLALCTQPGIFSWDRLDPGTALLLANLPA
LKGRGADFGCGLGILSRAVLGSEAVTALTLLEIDRRAVEMARRNVADPRATILWADIRASGAVPENLDFVVTNPPFHEGG
SEDQALGRAFIARAAEALRPGGALWLVANAHLPYEASLREAFRHVAVAVQANGYRVYEARR
>Mature_301_residues
MRHAVYGLPPVDLAEVPGDAVQLSPLIPGAARLEDLSENSLDAATVLAPPGTVERRYVLAQVLRALGPGGRMVALAPKDR
GGTRLAKELTTFGCAAADQPRRHHRICTAERPTDLAGVAEAIDEGGPRHVDNLALCTQPGIFSWDRLDPGTALLLANLPA
LKGRGADFGCGLGILSRAVLGSEAVTALTLLEIDRRAVEMARRNVADPRATILWADIRASGAVPENLDFVVTNPPFHEGG
SEDQALGRAFIARAAEALRPGGALWLVANAHLPYEASLREAFRHVAVAVQANGYRVYEARR

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=262, Percent_Identity=32.0610687022901, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87082206, Length=204, Percent_Identity=26.9607843137255, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 31996; Mature: 31996

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHAVYGLPPVDLAEVPGDAVQLSPLIPGAARLEDLSENSLDAATVLAPPGTVERRYVLA
CCCCCCCCCCCCHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
QVLRALGPGGRMVALAPKDRGGTRLAKELTTFGCAAADQPRRHHRICTAERPTDLAGVAE
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHH
AIDEGGPRHVDNLALCTQPGIFSWDRLDPGTALLLANLPALKGRGADFGCGLGILSRAVL
HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
GSEAVTALTLLEIDRRAVEMARRNVADPRATILWADIRASGAVPENLDFVVTNPPFHEGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCC
SEDQALGRAFIARAAEALRPGGALWLVANAHLPYEASLREAFRHVAVAVQANGYRVYEAR
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHEEEEEECCCEEEEECC
R
C
>Mature Secondary Structure
MRHAVYGLPPVDLAEVPGDAVQLSPLIPGAARLEDLSENSLDAATVLAPPGTVERRYVLA
CCCCCCCCCCCCHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
QVLRALGPGGRMVALAPKDRGGTRLAKELTTFGCAAADQPRRHHRICTAERPTDLAGVAE
HHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHHHHH
AIDEGGPRHVDNLALCTQPGIFSWDRLDPGTALLLANLPALKGRGADFGCGLGILSRAVL
HHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
GSEAVTALTLLEIDRRAVEMARRNVADPRATILWADIRASGAVPENLDFVVTNPPFHEGG
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCCCC
SEDQALGRAFIARAAEALRPGGALWLVANAHLPYEASLREAFRHVAVAVQANGYRVYEAR
CHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHEEEEEECCCEEEEECC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA