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The map label for this gene is tsf

Identifier: 170749849

GI number: 170749849

Start: 3664533

End: 3665459

Strand: Reverse

Name: tsf

Synonym: Mrad2831_3449

Alternate gene names: 170749849

Gene position: 3665459-3664533 (Counterclockwise)

Preceding gene: 170749850

Following gene: 170749848

Centisome position: 60.31

GC content: 69.26

Gene sequence:

>927_bases
ATGGCCAACATCACCGCCGCGATGGTGAAGGAGCTCCGGGAGAAGACCGGCGCCGGCATGATGGACTGCAAGGGCGCGCT
CAACGAGACGCAGGGCGACATCGAGGCCGCCGTCGACTGGCTGCGCAAGAAGGGTCTCGCCAAGGCCGCCAAGAAGGCCG
GCCGCGTCGCCGCCGAGGGCCTCGTCGCCGTCGAGTCCGCCGGCCACCACGCCGCCGTGGTCGAGGTGAACTCCGAGACC
GACTTCGTCGCCCGCAACGACGCCTTCCAGGCCTTCGCCCGCGAAGCCGCCAAGATCGCCCTGAACACCGACGGCACGCT
GGAGGGTCTCCAGACCGCCCACTTCCCGGGCGCCACCGAGACCGTCTCGGAGAAGCTGCAGGCCCTGATCGCCACCATCG
GCGAGAACATGAACCTGCGCCGGGTCACCAAGCTCGAGGTCAAGAAGGGCGTCATCGCCTCCTACGTGCACAACCAGATC
TCCGAGGGCCTCGGCAAGATCGGCGTGCTCGTGGCGCTCGAGTCCGAGGGCGACGTCGACGCGCTCTCGGCGCTGGGCCG
CCAGATCGCCATGCACATCGCGGCGACCAACCCGGTGGCGCTGGACGCCTCGGGCGTCGACGCCGCCACGGTGGAGCGCG
AGTCGAACATCCTGCGCGAGAAGAACGCCGGCAAGCCGGACCACGTCCTCGCCAAGATCATCGAGAGCGGCCTGAAGAGC
TACTACAAGGAGGTCACCCTCCTGGAGCAGCCCTTCGTGCACGACGGCTCCAAGACGGTGAGCCAGGTCCTCAAGGAGGC
CGGCTCCAAGGTCGGCGGCCCCGTGACCCTGACGGGCTTCGTCCGCTACGCGCTGGGCGACGGCATCGAGAAGGAAGAGG
GTCCGGACTTCGCCACCGAGGTCGCCCAGCAGGCCGGCCGCGCCTGA

Upstream 100 bases:

>100_bases
CGGCACCGTCATCGGGCCGTCGCGAATCCAGGCATACCGGGCCCGGCCGCTCACCCGCGCGCCGGGCCTCTCGCATCCAG
ACCACACGAAAGGGACCGCC

Downstream 100 bases:

>100_bases
GTTCGAGCGCGAGCGCCCGGCCTGCCGGGCTCGCGCGTGACCAGCCCCGTCCGGCACGAGCCGGGCGGGGCTTCGCGTTT
CCGGAGTCGCGGGATCGATC

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MANITAAMVKELREKTGAGMMDCKGALNETQGDIEAAVDWLRKKGLAKAAKKAGRVAAEGLVAVESAGHHAAVVEVNSET
DFVARNDAFQAFAREAAKIALNTDGTLEGLQTAHFPGATETVSEKLQALIATIGENMNLRRVTKLEVKKGVIASYVHNQI
SEGLGKIGVLVALESEGDVDALSALGRQIAMHIAATNPVALDASGVDAATVERESNILREKNAGKPDHVLAKIIESGLKS
YYKEVTLLEQPFVHDGSKTVSQVLKEAGSKVGGPVTLTGFVRYALGDGIEKEEGPDFATEVAQQAGRA

Sequences:

>Translated_308_residues
MANITAAMVKELREKTGAGMMDCKGALNETQGDIEAAVDWLRKKGLAKAAKKAGRVAAEGLVAVESAGHHAAVVEVNSET
DFVARNDAFQAFAREAAKIALNTDGTLEGLQTAHFPGATETVSEKLQALIATIGENMNLRRVTKLEVKKGVIASYVHNQI
SEGLGKIGVLVALESEGDVDALSALGRQIAMHIAATNPVALDASGVDAATVERESNILREKNAGKPDHVLAKIIESGLKS
YYKEVTLLEQPFVHDGSKTVSQVLKEAGSKVGGPVTLTGFVRYALGDGIEKEEGPDFATEVAQQAGRA
>Mature_307_residues
ANITAAMVKELREKTGAGMMDCKGALNETQGDIEAAVDWLRKKGLAKAAKKAGRVAAEGLVAVESAGHHAAVVEVNSETD
FVARNDAFQAFAREAAKIALNTDGTLEGLQTAHFPGATETVSEKLQALIATIGENMNLRRVTKLEVKKGVIASYVHNQIS
EGLGKIGVLVALESEGDVDALSALGRQIAMHIAATNPVALDASGVDAATVERESNILREKNAGKPDHVLAKIIESGLKSY
YKEVTLLEQPFVHDGSKTVSQVLKEAGSKVGGPVTLTGFVRYALGDGIEKEEGPDFATEVAQQAGRA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Homo sapiens, GI171846268, Length=302, Percent_Identity=28.476821192053, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI291084500, Length=323, Percent_Identity=27.2445820433437, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI291084502, Length=94, Percent_Identity=42.5531914893617, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI291084498, Length=94, Percent_Identity=42.5531914893617, Blast_Score=78, Evalue=9e-15,
Organism=Escherichia coli, GI1786366, Length=304, Percent_Identity=44.7368421052632, Blast_Score=216, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17561440, Length=301, Percent_Identity=31.2292358803987, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI19921466, Length=309, Percent_Identity=28.1553398058252, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_METRJ (B1LTQ7)

Other databases:

- EMBL:   CP001001
- RefSeq:   YP_001756109.1
- ProteinModelPortal:   B1LTQ7
- SMR:   B1LTQ7
- GeneID:   6139497
- GenomeReviews:   CP001001_GR
- KEGG:   mrd:Mrad2831_3449
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- ProtClustDB:   PRK09377
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 32398; Mature: 32267

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANITAAMVKELREKTGAGMMDCKGALNETQGDIEAAVDWLRKKGLAKAAKKAGRVAAEG
CCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAVESAGHHAAVVEVNSETDFVARNDAFQAFAREAAKIALNTDGTLEGLQTAHFPGATE
HHEEECCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCCHH
TVSEKLQALIATIGENMNLRRVTKLEVKKGVIASYVHNQISEGLGKIGVLVALESEGDVD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
ALSALGRQIAMHIAATNPVALDASGVDAATVERESNILREKNAGKPDHVLAKIIESGLKS
HHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YYKEVTLLEQPFVHDGSKTVSQVLKEAGSKVGGPVTLTGFVRYALGDGIEKEEGPDFATE
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHH
VAQQAGRA
HHHHHCCC
>Mature Secondary Structure 
ANITAAMVKELREKTGAGMMDCKGALNETQGDIEAAVDWLRKKGLAKAAKKAGRVAAEG
CCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAVESAGHHAAVVEVNSETDFVARNDAFQAFAREAAKIALNTDGTLEGLQTAHFPGATE
HHEEECCCCEEEEEEECCCCCEEECHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCCHH
TVSEKLQALIATIGENMNLRRVTKLEVKKGVIASYVHNQISEGLGKIGVLVALESEGDVD
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHH
ALSALGRQIAMHIAATNPVALDASGVDAATVERESNILREKNAGKPDHVLAKIIESGLKS
HHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
YYKEVTLLEQPFVHDGSKTVSQVLKEAGSKVGGPVTLTGFVRYALGDGIEKEEGPDFATE
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHH
VAQQAGRA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA