| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is yyaM [H]
Identifier: 170749802
GI number: 170749802
Start: 3610380
End: 3611348
Strand: Reverse
Name: yyaM [H]
Synonym: Mrad2831_3401
Alternate gene names: 170749802
Gene position: 3611348-3610380 (Counterclockwise)
Preceding gene: 170749803
Following gene: 170749800
Centisome position: 59.42
GC content: 72.96
Gene sequence:
>969_bases TTGACGGCCGGGCGCGCGAGCCGGACTTCCTCGGCCGCGCCCGCCTACCTGCTGCTGACCGTCACGGCGCTCCTCTGGGC CGGCAACGCCGTCACCAGCCGCTGGGCGCCCGGTCACGTCTCGCCCCAGGTCATCACGACGCTTCGTTGGGCGGTGGCCT GCCTGGTGCTCATGCCCTTCGCCGGGCGCCGGCTCGCCGCCGCGTTGCCGCTGCTGCGGCCGCACTGGCTGCGCATCCTG CTGATGGGCGGCCTCGGCTACACGGCCTTCAACTGTCTGTTCTACGCGGCCGGCGTCCATACCGGCGCGATCAACCTCGC CCTGTTCCAGGGCGCGATCCCCGTGCTGGTGATCGTCCTGAACCGGCTCGCCTACCGGGTCCCGGTCGCGCCGGGACAGG TGCTGGGCGTGGCGCTGACCCTGGTGGGCGCCGGCCTCGCCGCCACGCACGGCGACTTCTCCGTGCTGACGAACCTCGCC TTCAACCGCGGCGACGTGCTCGTCTTCGGCGCCTGCCTGCTCTACGCGGGCTACACGATCTTCCTGCCGACGCGCCCGAA GGTGCCGGCCCTGGCGTTCTTCGCCGCGATGGCGATCGCGGCGTTCGTCACCTCGCTGCCGCCGCTCGCCGTCGAGTGGG CGACCGGCCACGCCGTCTGGCCCAACCGCGAGGGCTGGCTGATGGTGGCCTTCGTCGGCCTCGGGCCGTCGCTGCTGGCG CAGCTCTTCTTCATGCGCGGCGTCGAGATCATCGGCCCGAACCGCGCCGGCCTGTTCGTCAACCTCGTGCCGATCTTCGG CGCGATCCTCGCCGTCCTGCTGGTCGGCGAGCCGTTCGGGACGACGGAAGCCGCCGCCCTGGCCCTGGTGCTGGCCGGGA TCGCCTGCGCCGAGCGCCTGAAACCGGCGCCCGTCGCGGCGGCGACTCCGGAAGCCGCCTACTCGCAGACGCGGACGCGG CGGATGTAG
Upstream 100 bases:
>100_bases CGCCCTACGACCTCGAGAAGGGCCGCCTCGTGTTCCGCCACAAGGACGAGCGCTCGTCCGGACCCCGTCCGCCGGTGCGC GGCGGCCAGTTCCGCCGCCG
Downstream 100 bases:
>100_bases ACGTCGCCGTAGGCATCGTAGGTCCGGCGGCGCTCGAAGTGGCAGACCGGGCCGTAATCCTCCTCGACGTAGACCGGCGG CGGGGCGCGGTAGACCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTAGRASRTSSAAPAYLLLTVTALLWAGNAVTSRWAPGHVSPQVITTLRWAVACLVLMPFAGRRLAAALPLLRPHWLRIL LMGGLGYTAFNCLFYAAGVHTGAINLALFQGAIPVLVIVLNRLAYRVPVAPGQVLGVALTLVGAGLAATHGDFSVLTNLA FNRGDVLVFGACLLYAGYTIFLPTRPKVPALAFFAAMAIAAFVTSLPPLAVEWATGHAVWPNREGWLMVAFVGLGPSLLA QLFFMRGVEIIGPNRAGLFVNLVPIFGAILAVLLVGEPFGTTEAAALALVLAGIACAERLKPAPVAAATPEAAYSQTRTR RM
Sequences:
>Translated_322_residues MTAGRASRTSSAAPAYLLLTVTALLWAGNAVTSRWAPGHVSPQVITTLRWAVACLVLMPFAGRRLAAALPLLRPHWLRIL LMGGLGYTAFNCLFYAAGVHTGAINLALFQGAIPVLVIVLNRLAYRVPVAPGQVLGVALTLVGAGLAATHGDFSVLTNLA FNRGDVLVFGACLLYAGYTIFLPTRPKVPALAFFAAMAIAAFVTSLPPLAVEWATGHAVWPNREGWLMVAFVGLGPSLLA QLFFMRGVEIIGPNRAGLFVNLVPIFGAILAVLLVGEPFGTTEAAALALVLAGIACAERLKPAPVAAATPEAAYSQTRTR RM >Mature_321_residues TAGRASRTSSAAPAYLLLTVTALLWAGNAVTSRWAPGHVSPQVITTLRWAVACLVLMPFAGRRLAAALPLLRPHWLRILL MGGLGYTAFNCLFYAAGVHTGAINLALFQGAIPVLVIVLNRLAYRVPVAPGQVLGVALTLVGAGLAATHGDFSVLTNLAF NRGDVLVFGACLLYAGYTIFLPTRPKVPALAFFAAMAIAAFVTSLPPLAVEWATGHAVWPNREGWLMVAFVGLGPSLLAQ LFFMRGVEIIGPNRAGLFVNLVPIFGAILAVLLVGEPFGTTEAAALALVLAGIACAERLKPAPVAAATPEAAYSQTRTRR M
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33805; Mature: 33673
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGRASRTSSAAPAYLLLTVTALLWAGNAVTSRWAPGHVSPQVITTLRWAVACLVLMPF CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC AGRRLAAALPLLRPHWLRILLMGGLGYTAFNCLFYAAGVHTGAINLALFQGAIPVLVIVL CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH NRLAYRVPVAPGQVLGVALTLVGAGLAATHGDFSVLTNLAFNRGDVLVFGACLLYAGYTI HHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEE FLPTRPKVPALAFFAAMAIAAFVTSLPPLAVEWATGHAVWPNREGWLMVAFVGLGPSLLA EECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCEEEEEEECCCHHHHH QLFFMRGVEIIGPNRAGLFVNLVPIFGAILAVLLVGEPFGTTEAAALALVLAGIACAERL HHHHHCCCEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC KPAPVAAATPEAAYSQTRTRRM CCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TAGRASRTSSAAPAYLLLTVTALLWAGNAVTSRWAPGHVSPQVITTLRWAVACLVLMPF CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC AGRRLAAALPLLRPHWLRILLMGGLGYTAFNCLFYAAGVHTGAINLALFQGAIPVLVIVL CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH NRLAYRVPVAPGQVLGVALTLVGAGLAATHGDFSVLTNLAFNRGDVLVFGACLLYAGYTI HHHHHCCCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCEE FLPTRPKVPALAFFAAMAIAAFVTSLPPLAVEWATGHAVWPNREGWLMVAFVGLGPSLLA EECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCCCCEEEEEEECCCHHHHH QLFFMRGVEIIGPNRAGLFVNLVPIFGAILAVLLVGEPFGTTEAAALALVLAGIACAERL HHHHHCCCEEECCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC KPAPVAAATPEAAYSQTRTRRM CCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]