| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is exoQ [H]
Identifier: 170749744
GI number: 170749744
Start: 3548635
End: 3549840
Strand: Direct
Name: exoQ [H]
Synonym: Mrad2831_3343
Alternate gene names: 170749744
Gene position: 3548635-3549840 (Clockwise)
Preceding gene: 170749740
Following gene: 170749745
Centisome position: 58.39
GC content: 68.49
Gene sequence:
>1206_bases ATGCCCCGGCTCGGCGTGGCCGCCGCGGCGTGGATCGTCCTGTTCCTCTTCGCGCCGGTGGTCGGCGAGCAGATCAAGCT GCCGGGCGTCGACAAGGCCGTCTGGATCGGCACCGACCTGATCGCCTTCGCGTTCCTGGTCCTGCGCCGCGACCTCGTCG CCACCCTGTTCGGCAGCCGCCTGCTGCTGCTCAGCTGGCCGCTCCTCGCGATCGCGTCGGCCCTCTGGTCCCTGACGCCC GGCCTCTCCGCCTATCACGGACTCCAGCTGCTCGCGACGATCGTGGCCGGCATCACCCTGCGGACGACCATGGGTCTGTC CCGCCTGGTCAGGATCGTCTTCTTGGGCCTGCTGGCCGGGCAGCTTCTGTCGGCCTTCCTCACGGTGGCGGCGCCGGCCC TGACGCGCGGGACCGACGGCAACTGGGCCGGGATCTACTCGCACAAGAACGTCCTCGGTTCCCTGTCGAGCCTTCAGATC CTCTGCGCGGCCTGCCTCTTCCTGCAGGGATGGAACCGTCTCCTGACCGCGTTCGGCTTCTGTCTCGCCCTGGCGCTCCT CCTGGCGACGCACTCGGCCACGGCCCTGGTGGCGGCCACCGCGGGGCTGATGCCGCTCGCCGCGATCTTCGCGTGGCGGC AGGGCAAGCACGTGACCGGCTTCTGCCTCGGCATCGCCATCGCCCTGGCGGGTGTCGGGATCCTCGTCGCCGCCGCGCGC GGGGCCGACATCTCGGCGAGCCTTCTGTCCGATCTCGGCAAGGACACCACGCTGACCGGCCGAACCGTCCTCTGGCAGTT CGGCCTCGACCAGTTCTGGCGCGAGCCGCTCATCGGCATCGGCTACAAAGCCTATTGGGAGAGCCCGGTCACCACGGCCG CCTACCTGCACTTCGTCATGAAGCAGAAGCTGTGGTTCTTCCACAACAACTTCATCGACACGGCCGTGGCGTTCGGGATC GTCGGCGTGATCCTCTTCACGGTCGCGCTGCTCGACACCGCACGCCGGGTGATCGCCGATTTCGCGCGCTCCTCCGGCTA CGTCGAGGCTTGGCCGATCCTGTTCATGAGCCAGCTCTTCGTCCTGGTGTGTTTCGAGTGCCCGCTCTTCGTCAATCACG GTCTCCACCAGCTCCTCCTCGCGGCGATCCTGCCGGTGGTGCGGTCGCCGACCATCGACGGGAGCGAACCGATCGCCCGC GACTGA
Upstream 100 bases:
>100_bases ACCGGGCCATGCGAGCGGCCTCGCGTGGTCGCCGCTCGGGCCGTACGGGCCGGATCACCGTTGGGCGGGTGCCGGGGGCG CGGGTGAAGGCGTCGACGCA
Downstream 100 bases:
>100_bases CCCGCCAGCCCTGAGCGGCGCCCGACCCGCGGCGGGGACCCGAACGGCCGGCGGCGAAGGTCTCGATCGGGGTCCAAGGT CCTGATCGGGAAGAATCACG
Product: O-antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MPRLGVAAAAWIVLFLFAPVVGEQIKLPGVDKAVWIGTDLIAFAFLVLRRDLVATLFGSRLLLLSWPLLAIASALWSLTP GLSAYHGLQLLATIVAGITLRTTMGLSRLVRIVFLGLLAGQLLSAFLTVAAPALTRGTDGNWAGIYSHKNVLGSLSSLQI LCAACLFLQGWNRLLTAFGFCLALALLLATHSATALVAATAGLMPLAAIFAWRQGKHVTGFCLGIAIALAGVGILVAAAR GADISASLLSDLGKDTTLTGRTVLWQFGLDQFWREPLIGIGYKAYWESPVTTAAYLHFVMKQKLWFFHNNFIDTAVAFGI VGVILFTVALLDTARRVIADFARSSGYVEAWPILFMSQLFVLVCFECPLFVNHGLHQLLLAAILPVVRSPTIDGSEPIAR D
Sequences:
>Translated_401_residues MPRLGVAAAAWIVLFLFAPVVGEQIKLPGVDKAVWIGTDLIAFAFLVLRRDLVATLFGSRLLLLSWPLLAIASALWSLTP GLSAYHGLQLLATIVAGITLRTTMGLSRLVRIVFLGLLAGQLLSAFLTVAAPALTRGTDGNWAGIYSHKNVLGSLSSLQI LCAACLFLQGWNRLLTAFGFCLALALLLATHSATALVAATAGLMPLAAIFAWRQGKHVTGFCLGIAIALAGVGILVAAAR GADISASLLSDLGKDTTLTGRTVLWQFGLDQFWREPLIGIGYKAYWESPVTTAAYLHFVMKQKLWFFHNNFIDTAVAFGI VGVILFTVALLDTARRVIADFARSSGYVEAWPILFMSQLFVLVCFECPLFVNHGLHQLLLAAILPVVRSPTIDGSEPIAR D >Mature_400_residues PRLGVAAAAWIVLFLFAPVVGEQIKLPGVDKAVWIGTDLIAFAFLVLRRDLVATLFGSRLLLLSWPLLAIASALWSLTPG LSAYHGLQLLATIVAGITLRTTMGLSRLVRIVFLGLLAGQLLSAFLTVAAPALTRGTDGNWAGIYSHKNVLGSLSSLQIL CAACLFLQGWNRLLTAFGFCLALALLLATHSATALVAATAGLMPLAAIFAWRQGKHVTGFCLGIAIALAGVGILVAAARG ADISASLLSDLGKDTTLTGRTVLWQFGLDQFWREPLIGIGYKAYWESPVTTAAYLHFVMKQKLWFFHNNFIDTAVAFGIV GVILFTVALLDTARRVIADFARSSGYVEAWPILFMSQLFVLVCFECPLFVNHGLHQLLLAAILPVVRSPTIDGSEPIARD
Specific function: Involved in the production of exopolysaccharide [H]
COG id: COG3307
COG function: function code M; Lipid A core - O-antigen ligase and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007016 [H]
Pfam domain/function: PF04932 Wzy_C [H]
EC number: NA
Molecular weight: Translated: 43058; Mature: 42926
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLGVAAAAWIVLFLFAPVVGEQIKLPGVDKAVWIGTDLIAFAFLVLRRDLVATLFGSR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH LLLLSWPLLAIASALWSLTPGLSAYHGLQLLATIVAGITLRTTMGLSRLVRIVFLGLLAG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLSAFLTVAAPALTRGTDGNWAGIYSHKNVLGSLSSLQILCAACLFLQGWNRLLTAFGF HHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLALALLLATHSATALVAATAGLMPLAAIFAWRQGKHVTGFCLGIAIALAGVGILVAAAR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GADISASLLSDLGKDTTLTGRTVLWQFGLDQFWREPLIGIGYKAYWESPVTTAAYLHFVM CCCCHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHCCHHHCCHHHHHCCCHHHHHHHHHHH KQKLWFFHNNFIDTAVAFGIVGVILFTVALLDTARRVIADFARSSGYVEAWPILFMSQLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VLVCFECPLFVNHGLHQLLLAAILPVVRSPTIDGSEPIARD HHHHHHCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PRLGVAAAAWIVLFLFAPVVGEQIKLPGVDKAVWIGTDLIAFAFLVLRRDLVATLFGSR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCH LLLLSWPLLAIASALWSLTPGLSAYHGLQLLATIVAGITLRTTMGLSRLVRIVFLGLLAG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLLSAFLTVAAPALTRGTDGNWAGIYSHKNVLGSLSSLQILCAACLFLQGWNRLLTAFGF HHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CLALALLLATHSATALVAATAGLMPLAAIFAWRQGKHVTGFCLGIAIALAGVGILVAAAR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GADISASLLSDLGKDTTLTGRTVLWQFGLDQFWREPLIGIGYKAYWESPVTTAAYLHFVM CCCCHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHCCHHHCCHHHHHCCCHHHHHHHHHHH KQKLWFFHNNFIDTAVAFGIVGVILFTVALLDTARRVIADFARSSGYVEAWPILFMSQLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VLVCFECPLFVNHGLHQLLLAAILPVVRSPTIDGSEPIARD HHHHHHCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8439670; 11481431 [H]