| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is amiC [H]
Identifier: 170749725
GI number: 170749725
Start: 3524942
End: 3526150
Strand: Reverse
Name: amiC [H]
Synonym: Mrad2831_3324
Alternate gene names: 170749725
Gene position: 3526150-3524942 (Counterclockwise)
Preceding gene: 170749732
Following gene: 170749724
Centisome position: 58.02
GC content: 72.04
Gene sequence:
>1209_bases ATGCCGCCCGCAGTGCTCACGCACTGGCGGGCTTTTTGCGTTCTGAAGGACTGCATGGGCCTCAGCCATCACCGCGTCGG CATCCTCTTCTCCGCGGACGGACCTTACGGTCTCGTCGGGCGGGCGATGCTGAACGGCGCATTGCTGGCCGTCGCGGAGG TGAACACGCGCGGCGACTGCGTCCTCGAGCCGGTGATCTGCGATCCGCAGGGCGCCCTCGCGGGCTACGTCGCCGGGGCC GAGCGGCTCCTCGGCGGGGGGATCCGCCACGTCGTCGGCTGCTACACCTCGTCGAGCCGCAAGGAGATCATCCCGATCTT CGAGAAGCGGGACGCCCTGCTCTGGTATCCGTCGCATTACGAGGGCTTCGAGACCTCGGCGAACGTGGTCTACACCGGCG CTGCGCCGAATCAGCACATCGTCCCGCTGGTCCGGCACCTGCTGGCCCGGGGCGGCCGCACGGCCTTCTGCGTCGGCTCC AACTACATCTGGGCGTGGGAGAACAACCGGATCCTGCGCGAGACGCTGGCGATCGCCGGCGGCGCGGTCGCGGGCGAGCG CTACCTGGCGGTGGGCGAGACCGCCTTCGATCAGGTGATCGCGGCGATCCTGGCCGCGAGGCCGGACTTCGTGTTCAACA CGCTGATCGGCATCTCGGCGTACCGGTTCTTCCGCGACTTCCGGAGCGCCTGCGCGGCGCACGGCATCGACCAGGCGCGG ACCATACCGGTGGCGAGCTGCAGCCTCGCCGAGCCGGAACTGGAGGCGATCGGGCCGGAGGCGGTCGACGGCCACCTGTC CTCCAGCGTCTACTTCACGTCGATCGACACGTCCCGCAACCGCGCCTTCCTGGCGGCCTACGCGACGCGCTTCCCCGACG GGCCGACCCCCTCGGCGGATGCCGAGGCCTCGTACATCGCGGTGCATCTCCTGGCGCGGGCGCTGGTGCGGGCCGGGACC GAGGACGCCGCGTCGGTGCGCCGGGCGGCCTGCGCGGAGGGGTTCGACGCGCCCCAGGGGCCGGTGTGCCTCGACGAGAC GACGCTCCACGCCTGCCTGACGCCCCGGATCGGGCTCTCGACGGCGGCGGCCCGCTTCACCATCGTAGCGGAGGCCGCGG AGCCGGTCGCGCCGGACCCCTACCTCGTGCGCAGCGATCCGCGCGTCGTGCCGGTGAGCCGGCGCCCGCGCCTGCGGGCG GTGCCATGA
Upstream 100 bases:
>100_bases CGCGGCACTTGACACAAGGGCCATAACCGAGGAGCCTAGTTTTCAGGCGCGGGGCAAAGCTGCCCAGTTTCGCGCCAATA CGTCACCATCTTTCTCGGCG
Downstream 100 bases:
>100_bases CGACGCCCCGGCTGATTCAGAACTTCAGCGGCGCGCAGGCCCTGCTGATCGCGCCGCCGAGCACCGCCACGGACGTCCTG GCGAGCACCCTGATGAAGCT
Product: putative aliphatic amidase expression-regulating protein, AmiC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MPPAVLTHWRAFCVLKDCMGLSHHRVGILFSADGPYGLVGRAMLNGALLAVAEVNTRGDCVLEPVICDPQGALAGYVAGA ERLLGGGIRHVVGCYTSSSRKEIIPIFEKRDALLWYPSHYEGFETSANVVYTGAAPNQHIVPLVRHLLARGGRTAFCVGS NYIWAWENNRILRETLAIAGGAVAGERYLAVGETAFDQVIAAILAARPDFVFNTLIGISAYRFFRDFRSACAAHGIDQAR TIPVASCSLAEPELEAIGPEAVDGHLSSSVYFTSIDTSRNRAFLAAYATRFPDGPTPSADAEASYIAVHLLARALVRAGT EDAASVRRAACAEGFDAPQGPVCLDETTLHACLTPRIGLSTAAARFTIVAEAAEPVAPDPYLVRSDPRVVPVSRRPRLRA VP
Sequences:
>Translated_402_residues MPPAVLTHWRAFCVLKDCMGLSHHRVGILFSADGPYGLVGRAMLNGALLAVAEVNTRGDCVLEPVICDPQGALAGYVAGA ERLLGGGIRHVVGCYTSSSRKEIIPIFEKRDALLWYPSHYEGFETSANVVYTGAAPNQHIVPLVRHLLARGGRTAFCVGS NYIWAWENNRILRETLAIAGGAVAGERYLAVGETAFDQVIAAILAARPDFVFNTLIGISAYRFFRDFRSACAAHGIDQAR TIPVASCSLAEPELEAIGPEAVDGHLSSSVYFTSIDTSRNRAFLAAYATRFPDGPTPSADAEASYIAVHLLARALVRAGT EDAASVRRAACAEGFDAPQGPVCLDETTLHACLTPRIGLSTAAARFTIVAEAAEPVAPDPYLVRSDPRVVPVSRRPRLRA VP >Mature_401_residues PPAVLTHWRAFCVLKDCMGLSHHRVGILFSADGPYGLVGRAMLNGALLAVAEVNTRGDCVLEPVICDPQGALAGYVAGAE RLLGGGIRHVVGCYTSSSRKEIIPIFEKRDALLWYPSHYEGFETSANVVYTGAAPNQHIVPLVRHLLARGGRTAFCVGSN YIWAWENNRILRETLAIAGGAVAGERYLAVGETAFDQVIAAILAARPDFVFNTLIGISAYRFFRDFRSACAAHGIDQART IPVASCSLAEPELEAIGPEAVDGHLSSSVYFTSIDTSRNRAFLAAYATRFPDGPTPSADAEASYIAVHLLARALVRAGTE DAASVRRAACAEGFDAPQGPVCLDETTLHACLTPRIGLSTAAARFTIVAEAAEPVAPDPYLVRSDPRVVPVSRRPRLRAV P
Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42982; Mature: 42851
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAVLTHWRAFCVLKDCMGLSHHRVGILFSADGPYGLVGRAMLNGALLAVAEVNTRGDC CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCEEEEEEEECCCCCE VLEPVICDPQGALAGYVAGAERLLGGGIRHVVGCYTSSSRKEIIPIFEKRDALLWYPSHY EEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCEEEECCCEEEEECCCC EGFETSANVVYTGAAPNQHIVPLVRHLLARGGRTAFCVGSNYIWAWENNRILRETLAIAG CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHC GAVAGERYLAVGETAFDQVIAAILAARPDFVFNTLIGISAYRFFRDFRSACAAHGIDQAR CCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TIPVASCSLAEPELEAIGPEAVDGHLSSSVYFTSIDTSRNRAFLAAYATRFPDGPTPSAD CCCEEECCCCCCHHHHCCCHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHCCCCCCCCCC AEASYIAVHLLARALVRAGTEDAASVRRAACAEGFDAPQGPVCLDETTLHACLTPRIGLS CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCCCCCH TAAARFTIVAEAAEPVAPDPYLVRSDPRVVPVSRRPRLRAVP HHHHEEEEEEECCCCCCCCCEEECCCCCEEECCCCCCCCCCC >Mature Secondary Structure PPAVLTHWRAFCVLKDCMGLSHHRVGILFSADGPYGLVGRAMLNGALLAVAEVNTRGDC CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCEEEEEEEECCCCCE VLEPVICDPQGALAGYVAGAERLLGGGIRHVVGCYTSSSRKEIIPIFEKRDALLWYPSHY EEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHEECCCCCCCCCCEEEECCCEEEEECCCC EGFETSANVVYTGAAPNQHIVPLVRHLLARGGRTAFCVGSNYIWAWENNRILRETLAIAG CCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHHHHHHC GAVAGERYLAVGETAFDQVIAAILAARPDFVFNTLIGISAYRFFRDFRSACAAHGIDQAR CCCCCCEEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TIPVASCSLAEPELEAIGPEAVDGHLSSSVYFTSIDTSRNRAFLAAYATRFPDGPTPSAD CCCEEECCCCCCHHHHCCCHHHCCCCCCCEEEEEECCCCCCEEEEEEHHHCCCCCCCCCC AEASYIAVHLLARALVRAGTEDAASVRRAACAEGFDAPQGPVCLDETTLHACLTPRIGLS CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHCCCCCCCH TAAARFTIVAEAAEPVAPDPYLVRSDPRVVPVSRRPRLRAVP HHHHEEEEEEECCCCCCCCCEEECCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]