| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is solA [H]
Identifier: 170749712
GI number: 170749712
Start: 3512139
End: 3513311
Strand: Reverse
Name: solA [H]
Synonym: Mrad2831_3311
Alternate gene names: 170749712
Gene position: 3513311-3512139 (Counterclockwise)
Preceding gene: 170749714
Following gene: 170749711
Centisome position: 57.81
GC content: 72.72
Gene sequence:
>1173_bases GTGCCGGCCGTGAGTCGCCGCTACGATGTCGCTGTCCTGGGCCTCGGCGCGATGGGCAGCGCCGCGCTCTACCAGCTGGC GAAACGGGGCGCCTCGGTGATCGGGCTCGACCGCTTCGCGCCGCCCCACGCCCTCGGGTCCAGCCACGGCGAGACGCGGA TCACCCGCCAGGCGGTCGGCGAGGGCGCCGACTACGTCCCCTTCGTCACCGCCTCGCACCGCATCTGGCGCGAGCTGGAG GCCGAAACCGGCGAGACTTTGCTGAACGCCTGCGGGGCGCTCGTCATGGCCCCGGGCCACGGCGTCTCCTCGCATCACGG CAAGCCGGACTTCGTCGGACGCTCCATCAGCGCCGCTGAGGGCGCCGGCATCGTCCACGAGGTGCTCGACGGCGCGGAGG TGGCCCGCCGGTTCCCGCAATTCCTCAACCTCGCGGGCGACGAGAAGGCCTATTACGAGCCGGGCGGCGGCTACGTGTTC CCGGAGCGCTGCCTCGCGGCGCAGCTCGGCCGCGCGGGTGCCGCGGGTGCCGAGATCCGCACGAACTGCGCGGTGGTCGG GCTTCAGCAGGACGGGAGCGGCGTCCGCGTCGACACGGCGGAGGGGACCATCCTGGCCGACCGCGCCGTCGTGGCCGCGG GCGCCTGGACGGCCCCGCTGCTCGGGAGCCCGTTCGACCGACTGCTGACCGTCCGCCGGCAGCTCCTGCACTGGTACGCG CTCGCGGACGAGACCGCCTACGGGCCGCACGCGCCGGTCTTCATCTGGATGTACGGGACGAGCGACACGGAATACCTCTA CGGCTTCCCGCCGCTGGACGGGTCCATCAAGGTCGCGACGGAGCAGTACAGCACCACCACCACCGCCGACGGGGTGGCGC GTCGCGTCGATCCGTCGGAATCCGACGAGATGTACCGGCTGCGCGTCGCGAACCGGCTGGCCGGCGCGACTCCGGAGCTC GTCCAGGCCGCGGCCTGCGTCTACACGGTCACCCCCGACCGCGGCTTCATCATCGACCGGCATCCCGAGATGGAGCGCGT GCGGGTGGTGTCCGCCTGCTCGGGGCACGGGTTCAAGCACTCGGCCGGCATCGGCGAGGCCGTCGCGGCTGAGCTGGCCG GGACCGGCAGCACCGTCGATCTCGCGCCCTTCGCCCTGGCACGTTTCAGTTGA
Upstream 100 bases:
>100_bases CGTCTTCCTGTGCCGCGCGAGACCGCCCCCGGATGCCTCGACCTGCCGATCTTCCTCCGTTCCGCGCTGCGGCGGTGTCC CGTCCCGGCAGCGAGCGGGC
Downstream 100 bases:
>100_bases TGCGCCGGCTAATGGCTCGTGGATTGCTTGAAACCGTGCCAAGATCAGTCGACCCGAGCAGGAAAGACCCGATGCGTCTC ACGATCCGCACCCTTCTGAC
Product: N-methyltryptophan oxidase
Products: NA
Alternate protein names: MSOX [H]
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MPAVSRRYDVAVLGLGAMGSAALYQLAKRGASVIGLDRFAPPHALGSSHGETRITRQAVGEGADYVPFVTASHRIWRELE AETGETLLNACGALVMAPGHGVSSHHGKPDFVGRSISAAEGAGIVHEVLDGAEVARRFPQFLNLAGDEKAYYEPGGGYVF PERCLAAQLGRAGAAGAEIRTNCAVVGLQQDGSGVRVDTAEGTILADRAVVAAGAWTAPLLGSPFDRLLTVRRQLLHWYA LADETAYGPHAPVFIWMYGTSDTEYLYGFPPLDGSIKVATEQYSTTTTADGVARRVDPSESDEMYRLRVANRLAGATPEL VQAAACVYTVTPDRGFIIDRHPEMERVRVVSACSGHGFKHSAGIGEAVAAELAGTGSTVDLAPFALARFS
Sequences:
>Translated_390_residues MPAVSRRYDVAVLGLGAMGSAALYQLAKRGASVIGLDRFAPPHALGSSHGETRITRQAVGEGADYVPFVTASHRIWRELE AETGETLLNACGALVMAPGHGVSSHHGKPDFVGRSISAAEGAGIVHEVLDGAEVARRFPQFLNLAGDEKAYYEPGGGYVF PERCLAAQLGRAGAAGAEIRTNCAVVGLQQDGSGVRVDTAEGTILADRAVVAAGAWTAPLLGSPFDRLLTVRRQLLHWYA LADETAYGPHAPVFIWMYGTSDTEYLYGFPPLDGSIKVATEQYSTTTTADGVARRVDPSESDEMYRLRVANRLAGATPEL VQAAACVYTVTPDRGFIIDRHPEMERVRVVSACSGHGFKHSAGIGEAVAAELAGTGSTVDLAPFALARFS >Mature_389_residues PAVSRRYDVAVLGLGAMGSAALYQLAKRGASVIGLDRFAPPHALGSSHGETRITRQAVGEGADYVPFVTASHRIWRELEA ETGETLLNACGALVMAPGHGVSSHHGKPDFVGRSISAAEGAGIVHEVLDGAEVARRFPQFLNLAGDEKAYYEPGGGYVFP ERCLAAQLGRAGAAGAEIRTNCAVVGLQQDGSGVRVDTAEGTILADRAVVAAGAWTAPLLGSPFDRLLTVRRQLLHWYAL ADETAYGPHAPVFIWMYGTSDTEYLYGFPPLDGSIKVATEQYSTTTTADGVARRVDPSESDEMYRLRVANRLAGATPELV QAAACVYTVTPDRGFIIDRHPEMERVRVVSACSGHGFKHSAGIGEAVAAELAGTGSTVDLAPFALARFS
Specific function: Catalyzes the oxidative demethylation of sarcosine. Can also oxidize other secondary amino acids such as N-methyl-L- alanine [H]
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MSOX/MTOX family. MSOX subfamily [H]
Homologues:
Organism=Homo sapiens, GI60499001, Length=401, Percent_Identity=29.6758104738155, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1787298, Length=392, Percent_Identity=29.5918367346939, Blast_Score=159, Evalue=3e-40, Organism=Caenorhabditis elegans, GI115535191, Length=401, Percent_Identity=27.930174563591, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25147318, Length=405, Percent_Identity=28.1481481481481, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 - InterPro: IPR006281 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: =1.5.3.1 [H]
Molecular weight: Translated: 41212; Mature: 41081
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVSRRYDVAVLGLGAMGSAALYQLAKRGASVIGLDRFAPPHALGSSHGETRITRQAVG CCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHC EGADYVPFVTASHRIWRELEAETGETLLNACGALVMAPGHGVSSHHGKPDFVGRSISAAE CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCC GAGIVHEVLDGAEVARRFPQFLNLAGDEKAYYEPGGGYVFPERCLAAQLGRAGAAGAEIR CCHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEECCCCEECHHHHHHHHHCCCCCCCCEEE TNCAVVGLQQDGSGVRVDTAEGTILADRAVVAAGAWTAPLLGSPFDRLLTVRRQLLHWYA CCEEEEEEEECCCCEEEECCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LADETAYGPHAPVFIWMYGTSDTEYLYGFPPLDGSIKVATEQYSTTTTADGVARRVDPSE HHCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCC SDEMYRLRVANRLAGATPELVQAAACVYTVTPDRGFIIDRHPEMERVRVVSACSGHGFKH CCHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCC SAGIGEAVAAELAGTGSTVDLAPFALARFS CCCCCHHHHHHHCCCCCCEEHHHHHHHHCC >Mature Secondary Structure PAVSRRYDVAVLGLGAMGSAALYQLAKRGASVIGLDRFAPPHALGSSHGETRITRQAVG CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHC EGADYVPFVTASHRIWRELEAETGETLLNACGALVMAPGHGVSSHHGKPDFVGRSISAAE CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCC GAGIVHEVLDGAEVARRFPQFLNLAGDEKAYYEPGGGYVFPERCLAAQLGRAGAAGAEIR CCHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEECCCCEECHHHHHHHHHCCCCCCCCEEE TNCAVVGLQQDGSGVRVDTAEGTILADRAVVAAGAWTAPLLGSPFDRLLTVRRQLLHWYA CCEEEEEEEECCCCEEEECCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH LADETAYGPHAPVFIWMYGTSDTEYLYGFPPLDGSIKVATEQYSTTTTADGVARRVDPSE HHCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCC SDEMYRLRVANRLAGATPELVQAAACVYTVTPDRGFIIDRHPEMERVRVVSACSGHGFKH CCHHHHHHHHHHHCCCCHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCC SAGIGEAVAAELAGTGSTVDLAPFALARFS CCCCCHHHHHHHCCCCCCEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10220347; 10913293; 11087383; 10368302 [H]