| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
Click here to switch to the map view.
The map label for this gene is pleC [H]
Identifier: 170749689
GI number: 170749689
Start: 3487433
End: 3489187
Strand: Direct
Name: pleC [H]
Synonym: Mrad2831_3287
Alternate gene names: 170749689
Gene position: 3487433-3489187 (Clockwise)
Preceding gene: 170749684
Following gene: 170749690
Centisome position: 57.38
GC content: 70.48
Gene sequence:
>1755_bases ATGGACGATGATACCCTCACGTTGATCCCCGACGATCCCGATGAGGCGCAACCGACCGCGGGAGCCTGGGTGATCGCCGT GATCGACGACGATCCGGCGGTCCATGACGGCACGCGTTACGCGCTGGCGAGCTACACCCTCGACGGGCGGGGCCTGGAGA TCCTCACCGCCCGGTCGGCCGCGGAGGCGCGGGTGCTGCTCGCCGAGCGCCGCGACGTGGCGGTGGTGCTGCTCGACGTG GTGATGGAGACCGACAATGCCGGGCTGGAGCTGGTGGACTACATCCGGCGCGAACTCCGGCAGGAGACCGTGCGCATCAT CCTGCGGACCGGCCAGCCCGGCCAGGCACCGGAGCGGCGGATCATCGTCGATTACGACATCAACGACTACAAGGCGAAGA CCGAACTGACCGCCGACAAGCTGTTCACCAGCCTCACCGCGGCCCTGCGCGCCCACCAGCAGCTGAAGCGCCTCGACGAG ACCCGGCGTGGGCTCGAGATCATCATCGACGCGGCGCCGATGCTCCTCGACCACAAATCGATGCAGCGCCTGGCCGAGGG TGTCCTCACCCAGGTCGCCTCGCTCCTGAACGTCGCCTGCGCGGGGATCCTGGTCCTGCGCGAGACCGCCGCCCCGCAGG AGCGCTTCTGCGTCCTGGCCGGGTCCGGCTGCTATGGCCACTATGCCGGGCGCGAGCCGGCCTGGCCGCTGGAGGAGCGG GTGCAACCCCTCGTTGAGCGGGCCTTCGCCGAGCGCCGCCACAGCTTCGGCGAGCATTGGTCGACCCTGTACCTGCACAC GGCGAGCGGCAGCGAGATCGTCGCGCTGATCGAGGCCGACCGCCAGCTCTCCGAGACGGACCGGTCGCTCATCGCCCTGT TCACGAGCCGGCTGTCGATCGCGTTCGACAACGTCATCCTCTACGAGCGGCTGCAGCAAACCAACGCCGACCTGGAGCGG CGGGTCGTCGAGCGGACCGCGGAGCTGATCCGGGCGAACCGCCGGCTGGACCTGCAGCGCTCGGACCTGCGGCGCGCCAA CAGCCTCAAGACCGAGATCCTCGGCACGATCGCGCACGATCTGAAGAATCCGCTGGCGGTGATCCTCGGCCGCGCCGAGA TGCTGTCCGACCTGATCGACATGCAAGGGGACCGGGAGCAGATGCGGGCGCAGGTGCAGCACGTGCGCACCAGCGCGAAG GGGCTGACGACCATGATCGACAGCCTCATGGCGGACGCGATGAACGACGCCCTCGACATCAGCCTGCGCCGGGAACCGGT GGACCTCGCGGGCCTCGCCCAGGAGGTCTGCGAGGCCGACCGGCCGCTGGCCGACGCCAAGGGCCAGACCCTGGTCTGCG AGGGCCCGGACGAGCTGTTCCTCTGCGGCGACGCCGAGCGCCTCCGCGAGGCGCTCGACAACCTCGTCTCCAACGCCATC AAGTACAGCCCGGCCGGCGGCGCGATCACGGTGCGGGTCAGCCGCGAGCCGGGCCCGAGGGGCGCGGAGCTGGTCTGCGC CGTCGCCGATCACGGGCCCGGCCTGTCGCCGGAGGATTCGTCCCGCGTGTTCGGCCGGTTCCAGCGCCTGTCGGCCAAGC CCACCGGCGGCGAGAACTCGACCGGTCTCGGGCTCTCGATCGTCCGTCGGATCGCCGAGCTGCACGGCGGCCGCGCCACG GCCGAGAGCGCCGGGCCGGGCTTAGGCGCGGTCTTCGCGATCCGCTTCCCGGAAGAATCCGTCGGCCTGTTCTGA
Upstream 100 bases:
>100_bases ACGAATGCAGGAATCGTATCGGCTCACGTTACCGTGACAAGTTTTCAACACGATTTCTAGCGTAGTCGTCCGGTTGCGAG CAGCATTTCGGGTCATAGCC
Downstream 100 bases:
>100_bases GGGGAGGCTCCCGGAGCTCTGCCGGACCGACGTCGGCTTGCCGCCGTCGCGAAGGACGGCCGCAGACTGCCGGTTCCGGC GATCCCGCGCGGGCCGGGAT
Product: response regulator receiver sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MDDDTLTLIPDDPDEAQPTAGAWVIAVIDDDPAVHDGTRYALASYTLDGRGLEILTARSAAEARVLLAERRDVAVVLLDV VMETDNAGLELVDYIRRELRQETVRIILRTGQPGQAPERRIIVDYDINDYKAKTELTADKLFTSLTAALRAHQQLKRLDE TRRGLEIIIDAAPMLLDHKSMQRLAEGVLTQVASLLNVACAGILVLRETAAPQERFCVLAGSGCYGHYAGREPAWPLEER VQPLVERAFAERRHSFGEHWSTLYLHTASGSEIVALIEADRQLSETDRSLIALFTSRLSIAFDNVILYERLQQTNADLER RVVERTAELIRANRRLDLQRSDLRRANSLKTEILGTIAHDLKNPLAVILGRAEMLSDLIDMQGDREQMRAQVQHVRTSAK GLTTMIDSLMADAMNDALDISLRREPVDLAGLAQEVCEADRPLADAKGQTLVCEGPDELFLCGDAERLREALDNLVSNAI KYSPAGGAITVRVSREPGPRGAELVCAVADHGPGLSPEDSSRVFGRFQRLSAKPTGGENSTGLGLSIVRRIAELHGGRAT AESAGPGLGAVFAIRFPEESVGLF
Sequences:
>Translated_584_residues MDDDTLTLIPDDPDEAQPTAGAWVIAVIDDDPAVHDGTRYALASYTLDGRGLEILTARSAAEARVLLAERRDVAVVLLDV VMETDNAGLELVDYIRRELRQETVRIILRTGQPGQAPERRIIVDYDINDYKAKTELTADKLFTSLTAALRAHQQLKRLDE TRRGLEIIIDAAPMLLDHKSMQRLAEGVLTQVASLLNVACAGILVLRETAAPQERFCVLAGSGCYGHYAGREPAWPLEER VQPLVERAFAERRHSFGEHWSTLYLHTASGSEIVALIEADRQLSETDRSLIALFTSRLSIAFDNVILYERLQQTNADLER RVVERTAELIRANRRLDLQRSDLRRANSLKTEILGTIAHDLKNPLAVILGRAEMLSDLIDMQGDREQMRAQVQHVRTSAK GLTTMIDSLMADAMNDALDISLRREPVDLAGLAQEVCEADRPLADAKGQTLVCEGPDELFLCGDAERLREALDNLVSNAI KYSPAGGAITVRVSREPGPRGAELVCAVADHGPGLSPEDSSRVFGRFQRLSAKPTGGENSTGLGLSIVRRIAELHGGRAT AESAGPGLGAVFAIRFPEESVGLF >Mature_584_residues MDDDTLTLIPDDPDEAQPTAGAWVIAVIDDDPAVHDGTRYALASYTLDGRGLEILTARSAAEARVLLAERRDVAVVLLDV VMETDNAGLELVDYIRRELRQETVRIILRTGQPGQAPERRIIVDYDINDYKAKTELTADKLFTSLTAALRAHQQLKRLDE TRRGLEIIIDAAPMLLDHKSMQRLAEGVLTQVASLLNVACAGILVLRETAAPQERFCVLAGSGCYGHYAGREPAWPLEER VQPLVERAFAERRHSFGEHWSTLYLHTASGSEIVALIEADRQLSETDRSLIALFTSRLSIAFDNVILYERLQQTNADLER RVVERTAELIRANRRLDLQRSDLRRANSLKTEILGTIAHDLKNPLAVILGRAEMLSDLIDMQGDREQMRAQVQHVRTSAK GLTTMIDSLMADAMNDALDISLRREPVDLAGLAQEVCEADRPLADAKGQTLVCEGPDELFLCGDAERLREALDNLVSNAI KYSPAGGAITVRVSREPGPRGAELVCAVADHGPGLSPEDSSRVFGRFQRLSAKPTGGENSTGLGLSIVRRIAELHGGRAT AESAGPGLGAVFAIRFPEESVGLF
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: COG3437
COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=239, Percent_Identity=28.4518828451883, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1786600, Length=238, Percent_Identity=32.7731092436975, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788713, Length=265, Percent_Identity=26.7924528301887, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87081816, Length=270, Percent_Identity=28.8888888888889, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=28.3261802575107, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI48994928, Length=246, Percent_Identity=28.4552845528455, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1789149, Length=272, Percent_Identity=26.4705882352941, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI145693157, Length=246, Percent_Identity=27.6422764227642, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1790861, Length=255, Percent_Identity=28.2352941176471, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1790346, Length=251, Percent_Identity=26.6932270916335, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786783, Length=232, Percent_Identity=29.3103448275862, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1790551, Length=117, Percent_Identity=37.6068376068376, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787894, Length=233, Percent_Identity=27.0386266094421, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87082128, Length=306, Percent_Identity=26.4705882352941, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64026; Mature: 64026
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN ; PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDDTLTLIPDDPDEAQPTAGAWVIAVIDDDPAVHDGTRYALASYTLDGRGLEILTARSA CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCH AEARVLLAERRDVAVVLLDVVMETDNAGLELVDYIRRELRQETVRIILRTGQPGQAPERR HHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCE IIVDYDINDYKAKTELTADKLFTSLTAALRAHQQLKRLDETRRGLEIIIDAAPMLLDHKS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHH MQRLAEGVLTQVASLLNVACAGILVLRETAAPQERFCVLAGSGCYGHYAGREPAWPLEER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH VQPLVERAFAERRHSFGEHWSTLYLHTASGSEIVALIEADRQLSETDRSLIALFTSRLSI HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH AFDNVILYERLQQTNADLERRVVERTAELIRANRRLDLQRSDLRRANSLKTEILGTIAHD HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LKNPLAVILGRAEMLSDLIDMQGDREQMRAQVQHVRTSAKGLTTMIDSLMADAMNDALDI HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEE SLRREPVDLAGLAQEVCEADRPLADAKGQTLVCEGPDELFLCGDAERLREALDNLVSNAI EECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHH KYSPAGGAITVRVSREPGPRGAELVCAVADHGPGLSPEDSSRVFGRFQRLSAKPTGGENS EECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC TGLGLSIVRRIAELHGGRATAESAGPGLGAVFAIRFPEESVGLF CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHCCCC >Mature Secondary Structure MDDDTLTLIPDDPDEAQPTAGAWVIAVIDDDPAVHDGTRYALASYTLDGRGLEILTARSA CCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCH AEARVLLAERRDVAVVLLDVVMETDNAGLELVDYIRRELRQETVRIILRTGQPGQAPERR HHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCE IIVDYDINDYKAKTELTADKLFTSLTAALRAHQQLKRLDETRRGLEIIIDAAPMLLDHKS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHH MQRLAEGVLTQVASLLNVACAGILVLRETAAPQERFCVLAGSGCYGHYAGREPAWPLEER HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH VQPLVERAFAERRHSFGEHWSTLYLHTASGSEIVALIEADRQLSETDRSLIALFTSRLSI HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH AFDNVILYERLQQTNADLERRVVERTAELIRANRRLDLQRSDLRRANSLKTEILGTIAHD HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH LKNPLAVILGRAEMLSDLIDMQGDREQMRAQVQHVRTSAKGLTTMIDSLMADAMNDALDI HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEE SLRREPVDLAGLAQEVCEADRPLADAKGQTLVCEGPDELFLCGDAERLREALDNLVSNAI EECCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHH KYSPAGGAITVRVSREPGPRGAELVCAVADHGPGLSPEDSSRVFGRFQRLSAKPTGGENS EECCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC TGLGLSIVRRIAELHGGRATAESAGPGLGAVFAIRFPEESVGLF CCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]