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The map label for this gene is ugpB [H]

Identifier: 170749684

GI number: 170749684

Start: 3480313

End: 3481620

Strand: Direct

Name: ugpB [H]

Synonym: Mrad2831_3282

Alternate gene names: 170749684

Gene position: 3480313-3481620 (Clockwise)

Preceding gene: 170749683

Following gene: 170749689

Centisome position: 57.26

GC content: 70.49

Gene sequence:

>1308_bases
ATGTCCGGCGCGCTCGCCGGCCTGCTCCTCGCGCTGCGCCCGCTGCCCGCCGAAGCCCTCACCGAACTCCAGTTCTGGCA
CGCCCTCGACGGGCCGAACGGCGAGCTGGTGACCCGCATCGCCGAGACGTTCAACGCCTCGCAGCCCGACTACCGGGTCG
TGCCGGTCTACAAGGGCTCCTACGCCGAGACGATCAGCAGCGGCATCACGGCCTACCGTACCGGCGCGGCGCCGCACCTG
CTGCAGGTTTTCGAGGTCGGGAACGGCACCATGGCGGCCGCGATCGGCGCCGTCAGGCCCGTCGCCACCGTGATGCGGGA
GGCGGGGCTCTCGGTGGCGCCGGAGGATTTCCTGCCGGTCGTCGCCACCAACTACCTGGATGCCGAGGGCGGGATGCTGT
CCCTGCCCTTCAACGTCTCGTCGACGGTCATGTGGATCAACCGCGACCGGTTCCGTCTGGCGGGCCTCGACGCCAAGAAA
CCCCCGGCCACCTGGCCGGAGGTCTTCGAGGCCGCGCGGCGGCTCAAGGCGGCGGACAGCAAGCGGTGCGCCCTGTCGTC
GGCTTGGCCGACCTGGGTGCATATCGAGCAGCTGTCCGTCTGGCACGACCGGCCGCTCGCGACCCGCTCCAACGGCCTGG
ACGGCTACGACGCCGAGCTCGTCTTCAACGGCCCGCTCCAGGTCCGTCACCTGCAGAACCTCGTCGACCTGAAGCGCGCG
GGCGTGTTCGAGTACAACGACCGCGTCAATCGCGGCGAGAGTCGGTTCGTCTCGGGCGACTGCGCGATCTTCCTCACCTC
GTCGAGCCTGTACGGCAAGGTCTCCACCGCGGCCCGGTTCGACTGGACGGTCGTGCCGATGCCCTTCTATCCCGACGTCG
TCGCGGAGCCGCAGAACGCGATCCTCGGCGGCGGCTCGCTCTACGCGATGCAGGGCAAGACGCCGGACGAGTACCGCGGC
GTCGCCCGGTTCCTGGCGTTCCTGATGGAGGGACGGCAGCAGGCCGCGCTGTACCGGAACACCGGCTACATCCCCACGAC
GCGCGCCGCCTACGCCGACGCGGTGGCGGAGGGCTTCTTCGAGCGGCACCCGCAGCTCCACGTCGCCGTGCAGGAGCTGA
CCCGGCGCCCGCCGACGCGCAACACCGCCGGCCTGCGCCTGGGCAATATGCTGCAGATCCGCGACCTCTGGGCCGAGGAG
CTGGAGGCGGCGCTCAACGGTGCGAAGTCGCCGCAGCAGGCCCTCGACGACGCCGTGGCACGGGGCAACCAAGTGCTGCG
GGTCTTCCAGCAGCGGACCAAGAAGTGA

Upstream 100 bases:

>100_bases
CGGGCGCCGGCACGGTGCTGCGGCTGTGGCTTCCGGAGCGGCTGGCATGAGCGGAGCGCGGCAACCGGCGCGGCGCGGGG
ACGGCCGCCTGAGGCCGCTG

Downstream 100 bases:

>100_bases
GCGTGGCGGATAGGTCGGCCCGCGCCGCCGTCGTCACCGGGCGGCGCGGAACCGCACCGTCTCGAAGAGGTGGCGGCCGA
GGGGATCCATCGTCAGGCCG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSGALAGLLLALRPLPAEALTELQFWHALDGPNGELVTRIAETFNASQPDYRVVPVYKGSYAETISSGITAYRTGAAPHL
LQVFEVGNGTMAAAIGAVRPVATVMREAGLSVAPEDFLPVVATNYLDAEGGMLSLPFNVSSTVMWINRDRFRLAGLDAKK
PPATWPEVFEAARRLKAADSKRCALSSAWPTWVHIEQLSVWHDRPLATRSNGLDGYDAELVFNGPLQVRHLQNLVDLKRA
GVFEYNDRVNRGESRFVSGDCAIFLTSSSLYGKVSTAARFDWTVVPMPFYPDVVAEPQNAILGGGSLYAMQGKTPDEYRG
VARFLAFLMEGRQQAALYRNTGYIPTTRAAYADAVAEGFFERHPQLHVAVQELTRRPPTRNTAGLRLGNMLQIRDLWAEE
LEAALNGAKSPQQALDDAVARGNQVLRVFQQRTKK

Sequences:

>Translated_435_residues
MSGALAGLLLALRPLPAEALTELQFWHALDGPNGELVTRIAETFNASQPDYRVVPVYKGSYAETISSGITAYRTGAAPHL
LQVFEVGNGTMAAAIGAVRPVATVMREAGLSVAPEDFLPVVATNYLDAEGGMLSLPFNVSSTVMWINRDRFRLAGLDAKK
PPATWPEVFEAARRLKAADSKRCALSSAWPTWVHIEQLSVWHDRPLATRSNGLDGYDAELVFNGPLQVRHLQNLVDLKRA
GVFEYNDRVNRGESRFVSGDCAIFLTSSSLYGKVSTAARFDWTVVPMPFYPDVVAEPQNAILGGGSLYAMQGKTPDEYRG
VARFLAFLMEGRQQAALYRNTGYIPTTRAAYADAVAEGFFERHPQLHVAVQELTRRPPTRNTAGLRLGNMLQIRDLWAEE
LEAALNGAKSPQQALDDAVARGNQVLRVFQQRTKK
>Mature_434_residues
SGALAGLLLALRPLPAEALTELQFWHALDGPNGELVTRIAETFNASQPDYRVVPVYKGSYAETISSGITAYRTGAAPHLL
QVFEVGNGTMAAAIGAVRPVATVMREAGLSVAPEDFLPVVATNYLDAEGGMLSLPFNVSSTVMWINRDRFRLAGLDAKKP
PATWPEVFEAARRLKAADSKRCALSSAWPTWVHIEQLSVWHDRPLATRSNGLDGYDAELVFNGPLQVRHLQNLVDLKRAG
VFEYNDRVNRGESRFVSGDCAIFLTSSSLYGKVSTAARFDWTVVPMPFYPDVVAEPQNAILGGGSLYAMQGKTPDEYRGV
ARFLAFLMEGRQQAALYRNTGYIPTTRAAYADAVAEGFFERHPQLHVAVQELTRRPPTRNTAGLRLGNMLQIRDLWAEEL
EAALNGAKSPQQALDDAVARGNQVLRVFQQRTKK

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=419, Percent_Identity=44.6300715990453, Blast_Score=386, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47764; Mature: 47633

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGALAGLLLALRPLPAEALTELQFWHALDGPNGELVTRIAETFNASQPDYRVVPVYKGS
CCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
YAETISSGITAYRTGAAPHLLQVFEVGNGTMAAAIGAVRPVATVMREAGLSVAPEDFLPV
HHHHHHHCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VATNYLDAEGGMLSLPFNVSSTVMWINRDRFRLAGLDAKKPPATWPEVFEAARRLKAADS
HHHCEEECCCCEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
KRCALSSAWPTWVHIEQLSVWHDRPLATRSNGLDGYDAELVFNGPLQVRHLQNLVDLKRA
CCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC
GVFEYNDRVNRGESRFVSGDCAIFLTSSSLYGKVSTAARFDWTVVPMPFYPDVVAEPQNA
CCEECCCCCCCCCCEEECCCEEEEEECCCCCCEECCCCCCCEEEECCCCCCHHHCCCCCC
ILGGGSLYAMQGKTPDEYRGVARFLAFLMEGRQQAALYRNTGYIPTTRAAYADAVAEGFF
EECCCEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ERHPQLHVAVQELTRRPPTRNTAGLRLGNMLQIRDLWAEELEAALNGAKSPQQALDDAVA
HHCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RGNQVLRVFQQRTKK
CCHHHHHHHHHHHCC
>Mature Secondary Structure 
SGALAGLLLALRPLPAEALTELQFWHALDGPNGELVTRIAETFNASQPDYRVVPVYKGS
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
YAETISSGITAYRTGAAPHLLQVFEVGNGTMAAAIGAVRPVATVMREAGLSVAPEDFLPV
HHHHHHHCCCEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VATNYLDAEGGMLSLPFNVSSTVMWINRDRFRLAGLDAKKPPATWPEVFEAARRLKAADS
HHHCEEECCCCEEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
KRCALSSAWPTWVHIEQLSVWHDRPLATRSNGLDGYDAELVFNGPLQVRHLQNLVDLKRA
CCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHC
GVFEYNDRVNRGESRFVSGDCAIFLTSSSLYGKVSTAARFDWTVVPMPFYPDVVAEPQNA
CCEECCCCCCCCCCEEECCCEEEEEECCCCCCEECCCCCCCEEEECCCCCCHHHCCCCCC
ILGGGSLYAMQGKTPDEYRGVARFLAFLMEGRQQAALYRNTGYIPTTRAAYADAVAEGFF
EECCCEEEEECCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
ERHPQLHVAVQELTRRPPTRNTAGLRLGNMLQIRDLWAEELEAALNGAKSPQQALDDAVA
HHCCCHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RGNQVLRVFQQRTKK
CCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA