| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170749668
Identifier: 170749668
GI number: 170749668
Start: 3459234
End: 3459821
Strand: Direct
Name: 170749668
Synonym: Mrad2831_3265
Alternate gene names: NA
Gene position: 3459234-3459821 (Clockwise)
Preceding gene: 170749667
Following gene: 170749669
Centisome position: 56.92
GC content: 68.03
Gene sequence:
>588_bases ATGTTGCTGAAACTGCTCGATCGGCTCGAAGAGGTGCTGATCGGAACGCTGATGGCGGCCGCGACCGTCATCACCTTCGC CACGGTGGTGCACCGGTTCCTCTCCGGCATCCCCGCGCTGCAGGACTACACCGACCGGGTCGACTTCGGCTGGTCGCAGG AACTGTGCATCTACATGTTCATCTGGGTCGCGAAGTTCGGCGCGGCCTACGGCGTGCGCACCGGCATCCATGTCGGCGTC GACGTGCTGGTCAACCGCCTGCCGCCGAGCGCGCGCCGGATCATGGTCCTGATCAGCCTCGCGGCGGGCGCCCTGTTCAC CGGGATCGTCGGCACGCTCGGCACGAACTTCGTCTGGCGCATAGGCCACACCGACCAGACGACGCCCGACATGGAGATCC CGGTCTGGATCGTCTACCTCGCGATCCCCCTCGGCTCCTACCTGATGTGCTTCCGCTTCCTGCAGGTCGCGTGGGGCTAC TGGACGACCGGGCACCTGCCCGCGCGCGACCACGCCCATGTCGACGGCGTCCCGACCGTCGAGGGCGTCGACCCGGTCCA GCTCGGCCGCGAGGGAGGCCCCGCATGA
Upstream 100 bases:
>100_bases ATGGCCTCCCGCGTCGGCAAGGATCTCGTCGCGGCGCTCAACAAGGAAGCCGAGGCGGCGCCGAACAACTGATCCCGCCG CCGCGCCGCCCGGACCGACC
Downstream 100 bases:
>100_bases GCGGCCTGATCATCTTCGGGCTGCTCATCGCCCTCATGCTCACCGGCATGCCGATCTCGATCGCGCTCGGCCTGACGGTG CTGACCTTCCTGTTCACGCT
Product: tripartite ATP-independent periplasmic transporter DctQ
Products: NA
Alternate protein names: C4-Dicarboxylate Transport System Permease Small Subunit; TRAP-Type C4-Dicarboxylate Transport System Small Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP-Type C4-Dicarboxylate Transport System; ArsR Family Transcriptional Regulator; C4-Dicarboxylate Transport System Small Permease Component; C4-Dicarboxylate Transport Protein DctQ; TRAP Dicarboxylate Family Transporter DctQ Subunit; TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Small Subunit; TRAP Transporter DctQ Subunit
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLLKLLDRLEEVLIGTLMAAATVITFATVVHRFLSGIPALQDYTDRVDFGWSQELCIYMFIWVAKFGAAYGVRTGIHVGV DVLVNRLPPSARRIMVLISLAAGALFTGIVGTLGTNFVWRIGHTDQTTPDMEIPVWIVYLAIPLGSYLMCFRFLQVAWGY WTTGHLPARDHAHVDGVPTVEGVDPVQLGREGGPA
Sequences:
>Translated_195_residues MLLKLLDRLEEVLIGTLMAAATVITFATVVHRFLSGIPALQDYTDRVDFGWSQELCIYMFIWVAKFGAAYGVRTGIHVGV DVLVNRLPPSARRIMVLISLAAGALFTGIVGTLGTNFVWRIGHTDQTTPDMEIPVWIVYLAIPLGSYLMCFRFLQVAWGY WTTGHLPARDHAHVDGVPTVEGVDPVQLGREGGPA >Mature_195_residues MLLKLLDRLEEVLIGTLMAAATVITFATVVHRFLSGIPALQDYTDRVDFGWSQELCIYMFIWVAKFGAAYGVRTGIHVGV DVLVNRLPPSARRIMVLISLAAGALFTGIVGTLGTNFVWRIGHTDQTTPDMEIPVWIVYLAIPLGSYLMCFRFLQVAWGY WTTGHLPARDHAHVDGVPTVEGVDPVQLGREGGPA
Specific function: Unknown
COG id: COG3090
COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21438; Mature: 21438
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKLLDRLEEVLIGTLMAAATVITFATVVHRFLSGIPALQDYTDRVDFGWSQELCIYMF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHH IWVAKFGAAYGVRTGIHVGVDVLVNRLPPSARRIMVLISLAAGALFTGIVGTLGTNFVWR HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE IGHTDQTTPDMEIPVWIVYLAIPLGSYLMCFRFLQVAWGYWTTGHLPARDHAHVDGVPTV ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC EGVDPVQLGREGGPA CCCCHHHHCCCCCCC >Mature Secondary Structure MLLKLLDRLEEVLIGTLMAAATVITFATVVHRFLSGIPALQDYTDRVDFGWSQELCIYMF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHH IWVAKFGAAYGVRTGIHVGVDVLVNRLPPSARRIMVLISLAAGALFTGIVGTLGTNFVWR HHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE IGHTDQTTPDMEIPVWIVYLAIPLGSYLMCFRFLQVAWGYWTTGHLPARDHAHVDGVPTV ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC EGVDPVQLGREGGPA CCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA